Cfel019889.1
Basic Information
- Insect
- Camponotus fellah
- Gene Symbol
- znf423
- Assembly
- GCA_030586385.1
- Location
- JAPIVC010000417.1:1818055-1833039[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2.3e-05 0.0047 18.7 1.7 1 23 84 106 84 106 0.98 2 21 0.053 11 8.1 4.6 1 23 112 134 112 134 0.98 3 21 2.7e-06 0.00055 21.7 2.3 1 23 140 162 140 162 0.99 4 21 7.1e-05 0.015 17.2 0.1 1 23 168 190 168 190 0.99 5 21 0.00019 0.04 15.8 0.6 1 23 358 381 358 381 0.97 6 21 0.78 1.6e+02 4.5 0.1 2 23 392 414 391 414 0.88 7 21 0.46 96 5.2 0.1 3 23 483 503 482 503 0.97 8 21 0.0018 0.37 12.8 0.4 3 23 520 540 518 540 0.95 9 21 0.0035 0.74 11.8 0.4 1 23 549 572 549 572 0.93 10 21 4.2 8.7e+02 2.2 0.2 1 23 577 600 577 600 0.91 11 21 0.79 1.6e+02 4.5 1.6 2 23 681 702 681 702 0.96 12 21 0.017 3.6 9.7 0.1 1 23 707 730 707 731 0.93 13 21 3.7 7.7e+02 2.3 0.1 2 23 795 818 794 818 0.81 14 21 0.00014 0.029 16.3 0.9 2 23 835 857 834 857 0.96 15 21 0.49 1e+02 5.1 1.9 1 23 866 889 866 889 0.91 16 21 1 2.1e+02 4.1 1.0 2 23 897 918 896 918 0.96 17 21 0.012 2.5 10.1 0.0 2 23 1081 1103 1080 1103 0.92 18 21 0.22 47 6.2 0.2 1 23 1115 1138 1115 1138 0.94 19 21 0.12 24 7.1 0.3 2 23 1151 1172 1150 1172 0.95 20 21 0.39 82 5.4 0.2 2 23 1181 1203 1180 1203 0.93 21 21 0.0062 1.3 11.1 1.9 1 23 1210 1233 1210 1233 0.97
Sequence Information
- Coding Sequence
- ATGAAACGTCAAGGAATATTCTGCCTGTTGAATATTCAGGATCGCGCGAAACCGCACGATTTTACCGGAGCAAGCACAGAAGCCTTAGGAACCGGAAGTTCCTCGTGGCACAGCGAGGATGGCGGGCCCAACTCACGTCGCGGCGGCGAGACACCGTCCTCCTGCGCGACTCCAACGTCAGCGAGCTTTCCGTCGGAACCCGAGGTCGACATCGACGTCAATCCCGACGGCACCAACCCCGCCGCCCCCTATCCCTGCCAGTTCTGCGACAGGAAGTTTCCGCGTCTCAGCTATCTAAAGAAACACGAACAGAGTCACGGCGATCAGATGCCATACCAGTGCAGTTGGTGCAACAGACTGTTCAAACACAAGCGCAGTCGCGATCGTCACGTAAAGCTGCACACCGGAGACAGGCGATATCGCTGCTCGAAATGTGAGGCTGCCTTCTCTAGGAGCGATCACTTGAAGATTCACTTGAAAACGCATGATACCCAGAGGCCTTATCAATGCACGGCTTGCACGAGAGGCTACAGTACAGCCGCGGCTTTAACAGCACACATGCAGTCTCACAAGAAACACCAATCGTCCTCGTCGTCTCAATCGGCCGGCCTCAAACTTCAGGACGTCGACTATGGTAGAAGAAGCGTATCTTCGCATAGCACATCGTCACCACCAGTACCAtcgtcgccgtcgccgtcgcTGAATCTCAGCCTGAATCCGAGGAACGTCCTGAAGACATCGCAGGGCACCGGCAGCGCTTCTACCACTCCGGTTCTCAGCTCGCCCTTGAAACTCGCCTGCATGTATTGCACCCGCGACTCGTTCAGCTGCATGCAACAGTTGCAGATGCACGTGCACACGATGCACCAGGCGATCCTGAGCGGCGCGGAAGGCCCGGCCCGGCAGCAGCCATCGCCGAGCAGAACGTCCAGCGAGCAACAGCAGGCAGCTGCCTGCAAACCGTTGGATCGCCAAGACGTCACGAAGGAACAGCGACTGGATCGCAAGTATCCGACGTCCGAGGATCGAGGCGATAGGCCGGCTACCGAGAGGGATCATTACGAGAACGGGTTTACCTGTAACCAGTGTACCATGAAATTCTCTACGTTGGCCCTCTTACGCGATCATTTGTTGTCGATACATCGAATGGATGGTTTTGGCGCGACGATGATGATGTGTCCCCTGTGCAGCATTCCGTGTTCCTCGGCGGCTTCCTACGCCGAGCATTACGTTCTCCAGCACTGTGAGAATCGCCGACCGCCGCCGACACACGCTGTAGATTACGGAGAGACGAAGCTGAACGGCAGCATTTACGACGGTACCGCGAGAGATTCCTCCCGGGTATCGAGAACCCGGGACGCGCCGGAAGCCGCCGATCTCACGAATAAGCATTCGACCAGATCTTCCTCGGATGCCGCTAGCGGTTACACCGCTAATACTCTGTTATGCGGTCAATGCGGTGCCGCGCTGAAAGACTTTGAATCCTTTCGCGAGCATGTGGCGCGACACTTGCAGGCCGACCATCGTAACCAGGAGATGTCCGGCAGACAGCATCTATGTCCCAAATGCGAAGCGGTCTTTTCAGACCGCGAGGATATGCTGGCCCACCTGACGAAACACTATCTGAACCAGGTCAGCAAGGAATACGCCTGCAGTGCCTGCAAAAAGCTCTATCCACATCCAGATCAACTTCAGAGGCACCTTTTGGACGTGCACGCGCATCATTTGTATCGTTGCGCTCTGTGCCGGGACACTTTCGACTCTAGAGTAGCGATACAGGTGCACTTCGCGGTGAAGCACAGCCAGGAGTGCCGAATTTACCGGTGCAGCACGTGCAGCGTATCTAACAATGAGAACTCGCCATCGGGAGCAAACGCGTCGGCTTCCAGCGAGGGTAGGAGCTTCTTTAGGAGCGAGGCTGAAATGGCGGCTCACGTGCGTAGTGTGCACGCGCCTCCACCCGTTGTCTCTCTGATGAACAGCAGCCCGATGGGTGCCGCGAGGAGCCCGGCTTCGACACCCGGTGGTGGCGTCGCGGCGCGTTGTTTGTTCTGCGGAATCTGTTGCGGTTCAGAACTCGAACTCCAGCTTCACTTGGCCAGCCACTCGACCAATCTCTACAGATGTCCCATCTGTCGGGAAGGTTTCGCGGTGGAGTTTCTCTTGGACCGACACGTCGCCCAGGTTCATCACGCGACCCAGGATCATCAGGTGCCATCCGTCAGAAGTAACTCGAGAGAGAACGGGCGCGTTCATCGACCGGTCAGAAATCATGAGGAAACGAAATCTTTGAAGAGAGGTCGCTCACCAGCGTCGAGTAATAACAATTCTTTAAATCAACGCGACAACAACAAACGTACAAACTATGGCTCTTCTGGACAGCAATGCGAGCTCTGCGAACGCGGTGAATTCGCGAACGAGGCCGAGCTGCAGGCACACAAGAAATTGGCTCACAGTCCTCCCAAACTGTCCAGTAAGAGTCTATCCACCTTGAATACCCTGACGTGTGGTTATTGCGGTGAGGTTTGTCGTTCGCGAAATGAGCTAGAGTCTCATACGAGGATCCAACACGCATCCAACGAGCCCGGCGGACGTCACAAGTGCAACATCTGTGACGAAGTGTGCCTGTCCAGTGTGACCTTGGCCGAACACAAGCTCCAAAAGCACTGCAAGATACAACTGAGTGACACGTGCGTGGTGTGCCGTGGTTGCCTGACTTCAGAAAGTCAATTTCTGGATCACGTGCAAAGACATAGCTTGGAAAACGTGGACCCGCAACAACGACTGGACAATTCTTTACCTCATTTGCCCGCACCATGCGTCGTTTGCCGGCAGACGCTGATCAGCGAACTAGAGTGTCGTTTGCATGCGCGGCATCATCTGCGAACGTCTTCGGGACCGCGCAGCGCTGTTTCTAGTCCGACCAGTCCCGGTAACGGTAAAACCCAGAGCCAGGGTTGCTGTCTCTGTTTGCGCGATTTTGCCGCTGATGATTTCGTCAGTCTGCCACCCAATCCTGCCAGTACGAGCGGACAATCGCTCAAGGTCTGCAAACCCTGCTATATGCGACACTCTCAGGGATTGCCTATTCTAAACTCGACGACCTATGAGCGGGCCAAATACGATACGATATGGTTCGCAAACAAGAATGGTCAATGGGATAGCTCCAAGGACAAGTGGGATGATAGAGGACTCAACCTAGAGAATCGATCCAGAAGTGAGCGAACTACGGATAAAAAACGTTGTGAAGAATGCGGAGTGAAATTTGAAGATCCCGAAGAGGCAGAGAAGCACAGAATCGCAGAACATGAAAAGATTAGCACTAATGGTTCAAAGGCATCCTATTCGTGTATACAGTGCCAGGTATCATTTCCAACTGAAGCCAAAATCCAGCAACACGTAAGAAAAGAACACCTGGAAACTTCCAGGAGAGCTTCTTTGGAAGCCTTGCGGTGTCATTTATGTTCATTTGAGGCTACCAGTCCTATGCAATTGCAAATTCACTTAATAGAACATACTTTCGTTGGCTGCGCTGCGCTCAGCTGTTACCTCTGTCAATCGCTCTTCACAACTCCTATTGGTCTTCAGAGTCACCTGCTACAAGAACACGGTCTGGGCGCGCGACCGTACGATTGCCCCAAGTGCACGctcaaattctttttcaatgcGGAGCTAGATCACCACATACTGACTTTTCACCGTCCAAGAGACGAGATTCATACTTCGTCGGCCGAAAACGAAATGAAAAATCGTGAGTCCGATGGTGGTGTAACAGTGAAGGAGGAAGTAATGCAAAGcaaggaagaggaagaggaggaggaagtgAACGTAGACGATCAGATAGGACAGGAGGAACACGAGGAAGTTAAACGAGAGGAGCAAAAGTTGAAGACGGAAGTAGATATTGAGACGACATCCAACAAACTGACATCGTGA
- Protein Sequence
- MKRQGIFCLLNIQDRAKPHDFTGASTEALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDIDVNPDGTNPAAPYPCQFCDRKFPRLSYLKKHEQSHGDQMPYQCSWCNRLFKHKRSRDRHVKLHTGDRRYRCSKCEAAFSRSDHLKIHLKTHDTQRPYQCTACTRGYSTAAALTAHMQSHKKHQSSSSSQSAGLKLQDVDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNPRNVLKTSQGTGSASTTPVLSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGAEGPARQQPSPSRTSSEQQQAAACKPLDRQDVTKEQRLDRKYPTSEDRGDRPATERDHYENGFTCNQCTMKFSTLALLRDHLLSIHRMDGFGATMMMCPLCSIPCSSAASYAEHYVLQHCENRRPPPTHAVDYGETKLNGSIYDGTARDSSRVSRTRDAPEAADLTNKHSTRSSSDAASGYTANTLLCGQCGAALKDFESFREHVARHLQADHRNQEMSGRQHLCPKCEAVFSDREDMLAHLTKHYLNQVSKEYACSACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCSTCSVSNNENSPSGANASASSEGRSFFRSEAEMAAHVRSVHAPPPVVSLMNSSPMGAARSPASTPGGGVAARCLFCGICCGSELELQLHLASHSTNLYRCPICREGFAVEFLLDRHVAQVHHATQDHQVPSVRSNSRENGRVHRPVRNHEETKSLKRGRSPASSNNNSLNQRDNNKRTNYGSSGQQCELCERGEFANEAELQAHKKLAHSPPKLSSKSLSTLNTLTCGYCGEVCRSRNELESHTRIQHASNEPGGRHKCNICDEVCLSSVTLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLENVDPQQRLDNSLPHLPAPCVVCRQTLISELECRLHARHHLRTSSGPRSAVSSPTSPGNGKTQSQGCCLCLRDFAADDFVSLPPNPASTSGQSLKVCKPCYMRHSQGLPILNSTTYERAKYDTIWFANKNGQWDSSKDKWDDRGLNLENRSRSERTTDKKRCEECGVKFEDPEEAEKHRIAEHEKISTNGSKASYSCIQCQVSFPTEAKIQQHVRKEHLETSRRASLEALRCHLCSFEATSPMQLQIHLIEHTFVGCAALSCYLCQSLFTTPIGLQSHLLQEHGLGARPYDCPKCTLKFFFNAELDHHILTFHRPRDEIHTSSAENEMKNRESDGGVTVKEEVMQSKEEEEEEEVNVDDQIGQEEHEEVKREEQKLKTEVDIETTSNKLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01406753;
- 90% Identity
- iTF_00868309;
- 80% Identity
- -