Basic Information

Insect: Formica aserva
Gene Symbol: znf423_1
Assembly: GCA_037039905.1
Location: JAXRKO010000010.1:1242610-1259856[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 2.4e-05 0.0048 18.7 1.7 1 23 90 112 90 112 0.98

2 22 0.056 11 8.1 4.6 1 23 118 140 118 140 0.98

3 22 2.8e-06 0.00056 21.7 2.3 1 23 146 168 146 168 0.99

4 22 7.5e-05 0.015 17.2 0.1 1 23 174 196 174 196 0.99

5 22 0.00029 0.057 15.3 1.1 1 23 362 385 362 385 0.97

6 22 0.83 1.7e+02 4.5 0.1 2 23 396 418 395 418 0.88

7 22 0.49 98 5.2 0.1 3 23 487 507 486 507 0.97

8 22 0.0054 1.1 11.3 0.4 3 23 524 544 522 544 0.95

9 22 0.0038 0.75 11.8 0.4 1 23 553 576 553 576 0.93

10 22 4.4 8.8e+02 2.2 0.2 1 23 581 604 581 604 0.91

11 22 3.6 7.2e+02 2.4 0.0 10 23 640 654 639 654 0.94

12 22 3.4 6.8e+02 2.5 2.2 2 23 685 706 685 706 0.96

13 22 0.0061 1.2 11.2 0.1 1 23 711 734 711 735 0.94

14 22 3.9 7.8e+02 2.3 0.1 2 23 798 821 797 821 0.81

15 22 0.00015 0.03 16.2 0.9 2 23 839 861 838 861 0.96

16 22 0.54 1.1e+02 5.0 2.6 1 23 870 893 870 893 0.92

17 22 1.1 2.2e+02 4.1 1.0 2 23 901 922 900 922 0.96

18 22 0.0025 0.49 12.4 0.1 2 23 1085 1107 1084 1107 0.96

19 22 0.16 32 6.7 0.2 1 23 1119 1142 1119 1142 0.95

20 22 0.31 63 5.8 0.2 2 23 1155 1176 1154 1176 0.95

21 22 0.42 83 5.4 0.2 2 23 1185 1207 1184 1207 0.93

22 22 0.09 18 7.5 3.0 1 23 1214 1237 1214 1237 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	2.4e-05	0.0048	18.7	1.7	1	23	90	112	90	112	0.98
2	22	0.056	11	8.1	4.6	1	23	118	140	118	140	0.98
3	22	2.8e-06	0.00056	21.7	2.3	1	23	146	168	146	168	0.99
4	22	7.5e-05	0.015	17.2	0.1	1	23	174	196	174	196	0.99
5	22	0.00029	0.057	15.3	1.1	1	23	362	385	362	385	0.97
6	22	0.83	1.7e+02	4.5	0.1	2	23	396	418	395	418	0.88
7	22	0.49	98	5.2	0.1	3	23	487	507	486	507	0.97
8	22	0.0054	1.1	11.3	0.4	3	23	524	544	522	544	0.95
9	22	0.0038	0.75	11.8	0.4	1	23	553	576	553	576	0.93
10	22	4.4	8.8e+02	2.2	0.2	1	23	581	604	581	604	0.91
11	22	3.6	7.2e+02	2.4	0.0	10	23	640	654	639	654	0.94
12	22	3.4	6.8e+02	2.5	2.2	2	23	685	706	685	706	0.96
13	22	0.0061	1.2	11.2	0.1	1	23	711	734	711	735	0.94
14	22	3.9	7.8e+02	2.3	0.1	2	23	798	821	797	821	0.81
15	22	0.00015	0.03	16.2	0.9	2	23	839	861	838	861	0.96
16	22	0.54	1.1e+02	5.0	2.6	1	23	870	893	870	893	0.92
17	22	1.1	2.2e+02	4.1	1.0	2	23	901	922	900	922	0.96
18	22	0.0025	0.49	12.4	0.1	2	23	1085	1107	1084	1107	0.96
19	22	0.16	32	6.7	0.2	1	23	1119	1142	1119	1142	0.95
20	22	0.31	63	5.8	0.2	2	23	1155	1176	1154	1176	0.95
21	22	0.42	83	5.4	0.2	2	23	1185	1207	1184	1207	0.93
22	22	0.09	18	7.5	3.0	1	23	1214	1237	1214	1237	0.97

Sequence Information

Coding Sequence: ATGCTCTTCAAAGGTAACAGCTCGCGGCTGGAGCTGCTGATTGGCAAGATCCACGCACACAAAGAACCGTCACAGGACGAGCAACACAAGTCTAAAGaAGCTCTAGGAACCGGAAGTTCCTCGTGGCATAGCGAGGATGGCGGGCCCAATTCCCGCCGCGGTGGCGAGACACCGTCCTCCTGCGCGACTCCAACATCGGCGAGTTTCCCGTCGGAGCCCGAGGTCGACGCCGACGTCAATCCCGACGGCACCAATCCCGCCGCCCCCTATCCCTGCCAATTCTGCGACAGGAAGTTTCCGCGTCTTAGCTATCTGAAGAAGCACGAACAGAGTCACGGTGATCAGATGCCGTATCAGTGCAGTTGGTGCAACAGACTATTCAAGCACAAGCGTAGCCGCGATCGTCACGTAAAGCTGCACACTGGGGACAGGCGATATCGCTGCTCGAAATGTGAGGCTGCCTTCTCTAGGAGCGATCACCTGAAGATCCACTTGAAAACGCATGACACCCAGAGGCCTTATCAATGCACGGCTTGCACGAGAGGCTACAGTACAGCCGCGGCTTTAACGGCGCACATGCAGTCTCACAAGAAACATcaatcatcgtcgtcgtctcAATCGGCCGGTCTCAAGCTTCAGGACGTCGACTATGGTAGAAGAAGCGTATCCTCGCACAGCACGTCGTCACCGCCGGTaccgtcgtcgccgtcgccgtcaTTGAATCTCAGTCTGAACCCGAGGAACGTCCTGAAGACGTCGCAGGGTACCGGCAGTGCCTCCACCACTCCGGTTCTCAGCTCGCCCCTGAAACTCACCTGCATGTACTGCACCCGGGACTCGTTCAGCTGCATGCAACAGCTGCAGATGCACGTCCACACGATGCACCAGGCGATCCTGAGTGGCGCGGAAGGTCCAGCTCGGCCGCCATCGCCGAGCAGAACGTCCAGCGAGCAGCAGGCGACTGTCTGCAAGCCGCTGGATCGTCAGGACGTCACGAAGGAATCGCGACTGGATCGCAAGTACCCGACGTCCGAGGACCGAGGCGACAGGTCGGCTGTCGAGCGGGAGCATTACGAGAACGGGTTCACCTGCAATCAGTGCACCATGAAGTTCTCTACGTTGACCCTCCTACGCGATCATTTGTTGTCGATACACCGAATCGACGGTTTCGGCGCGGCGATGATGATGTGTCCCTTGTGCAGTATACCGTGTTCCTCGGCGGCTTCCTACGCCGAGCACTACGTCCTTCAGCACTGTGAGAATCGCCGACCGGCGCCGACGCACGCTATAGATTACGGGGAAACGAAGCTGAACGGCGGCATTTACGACGGTACCGCGAGGGATCCCTCCCGGATATCGAGGACTCGGGATGCGCCGGAAGCCGCTGATCTCACGAATAAGCACTCGACCAGATCTTCCTCGGATACCGCTGGCAGTTACACTGCTGATACTCTGCTATGCGGCCAATGCGGTGCCGCATTAAAAGACTTCGAATCCTTCCGCGAGCATGTGGCGCGACACTTGCAGGCCGACCATCGTAACCAGGAGATGTCCGGCAGACAACATCTATGTCCCAAATGCGAAGCCATCTTCTCGGACCGCGAGGATATGCTGGCCCACCTGACCAAGCATTATCTGGGCCAGGTCAGCAAAGAGTACGCCTGCAGTGCCTGCAAAAAGCTCTATCCGCATCCAGATCAGCTTCAGAGGCACCTTTTGGATGTGCACGCGCATCATCTGTATCGTTGCGCTCTGTGCCGGGACACCTTCGACTCCAGAGTAGCAATACAGGTGCATTTTGCGGTGAAACACAGCCAAGAGTGCCGGGTCTACCGGTGCAGCACGTGCGCCGTGTCCAACAATGAGAACTCGCCGCCGGGAGGAAACGTGACGGCTTCTGGCGAAGGTAGGAGCTTCTTCAGGACCGAGGCCGAATTGGCGGCGCACGTGCGTAGTGTGCACGCGCCTCCACCCGCTGTCTCTCTGATGAATAGCAGCCCGGTGGGTGCTGCGAGGAGCCCGGCCTCGACGCCCGGTGGTGGCATCGCGGCGCGTTGTTTCTTCTGCGGGATTTGCTGCGGTTCAGATCTCGAACTCCAGCTTCATTTGGCCAGCCACTCGACCAATCTCTACAGATGTCCCATCTGCCGGGAAGGATTCGCGGTGGAGTTTCTCTTGGATCGACACATCGCCCAGGCTCATCACGCCACCCAGGACCATCAGGTACCATCCGTCAGAAGTAACTTGAGAGAGAACGGGCGCGTTCATCGAACGGCTAGAAATCAGGAAGAAACGAAGTCTCTGAAGAGACGTTCACCAGCATCGAGTAACAACAATTCCCTGAATCAGCGCGACAACAACAAACGTGCAAACTATGGCACTTCCGGACAGCAGTGCGAGCTCTGCGAACGCGGCGAGTTTGCGAACGAGGCCGAGCTGCAGGCACACAAGAAACTGGCTCACCAAACGCCTCCTAAACTGTCCAGTAAAAGTTTATCTACCTTGAATACCCTGACGTGCGGTTATTGCGGCGAGGTTTGTCGTTCGCGAAACGAACTAGAGTCGCACACGAGGATCCAACATGCGTCCAACGAGCCCGGCGGACGTCACAAATGCAACATCTGCGACGAGGTATGCTTGTCCAGCACGACTTTGGCCGAACACAAGCTCCAGAAGCACTGCAAGATACAACTGAGCGATACGTGCGTGGTGTGTCGTGGTTGCCTGACCTCGGAGAGTCAATTCCTGGATCACGTGCAAAGGCATAGCTTGGAAAACGTGGACCCGCAACAACGATTGGACAACTCTTTACCTCATTTACCCGCCCCGTGCGTTGTTTGCCGGCAGACGCTGATCAGCGAATTAGAGTGTCGTTTGCATGCACGGCATCATCTACGGACGTCTTCAGGATCGCGCAGCGCCGTTTCTAGTCCGACCAGTCCCGGTGGCGGCAAAACTCAGAGCCAAGGTTGCTGTCTCTGTTTGCGCGATTTTGCTGCCGATGATTTCGTCAGCCTGCCACCCAATCCTGCCAGTACGAGTGGACAACCACTCAAGGTCTGCAAAACCTGCTACATGCGACATTCTCAGGGATTGCCTATCCTGAACTCGACGACCTATGAGCGGGCCAAGTACGATACGACCTGGTTCGCAAGCAAGAATGGTCAATGGGATAGTTCCAAGGACAAATGGGATGACAGAGGACTCAATGTAGAGAATCGATCCAAAAATGAAGGAAACACGGATAAAAAACGCTGTGAGGAGTGCGGGGTGAAGTTCGAAGATCCTGAAGAGGCGGAGAAACACAGAATCACAGAACATGAAAAGATTAGCACTAGTGGTTCGAAACCCTCCTATACATGTATACAGTGTCAGGTATCATTTCCAACCGAAGCCAAAATTCAGCAACACGTGAGAAAGGAACATCTGGAAACATCCAGGAGAGCTTCCTTGGAAGCCTTGCGATGTCATTTGTGCTCATTTGAAGCTGCCAGTCCTATGCAATTGCAAATTCACTTAATAGAACATACTTTTGTTGGCTGCGCTGCGCTCAGCTGTTACCTCTGTCAGTCGCTTTTCACAACTCCTATTGGTCTTCAGAGTCACCTGCTACAGGAACACGGTCTGGGCGCGCGACCTTACGATTGCCGCAAGTGCACGCTCAAGTTCTTCTTCAACGCGGAGCTAGACCACCACATATTGACTTTCCATCGTCCGAGGGATGAGATTCATCCTTCGTCAGTCGAGAATGCTCGCGAGATGAAGAATCGCGAGCCCGACGGCGGTGTAACGGTGAAGGAGGAAGTGATGCAAGGTGGCaaagaagaggaggaggaggaggaagtgAACGTGGACGATCAGATAGGACAGGAGGAACATGATGAAGCTAAACGAGAGGAGCAGAAGTTGAAGACGGAAGTAGATATCGAGACGACATCCAACAAAATGGAATCGTGA
Protein Sequence: MLFKGNSSRLELLIGKIHAHKEPSQDEQHKSKEALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADVNPDGTNPAAPYPCQFCDRKFPRLSYLKKHEQSHGDQMPYQCSWCNRLFKHKRSRDRHVKLHTGDRRYRCSKCEAAFSRSDHLKIHLKTHDTQRPYQCTACTRGYSTAAALTAHMQSHKKHQSSSSSQSAGLKLQDVDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNPRNVLKTSQGTGSASTTPVLSSPLKLTCMYCTRDSFSCMQQLQMHVHTMHQAILSGAEGPARPPSPSRTSSEQQATVCKPLDRQDVTKESRLDRKYPTSEDRGDRSAVEREHYENGFTCNQCTMKFSTLTLLRDHLLSIHRIDGFGAAMMMCPLCSIPCSSAASYAEHYVLQHCENRRPAPTHAIDYGETKLNGGIYDGTARDPSRISRTRDAPEAADLTNKHSTRSSSDTAGSYTADTLLCGQCGAALKDFESFREHVARHLQADHRNQEMSGRQHLCPKCEAIFSDREDMLAHLTKHYLGQVSKEYACSACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRVYRCSTCAVSNNENSPPGGNVTASGEGRSFFRTEAELAAHVRSVHAPPPAVSLMNSSPVGAARSPASTPGGGIAARCFFCGICCGSDLELQLHLASHSTNLYRCPICREGFAVEFLLDRHIAQAHHATQDHQVPSVRSNLRENGRVHRTARNQEETKSLKRRSPASSNNNSLNQRDNNKRANYGTSGQQCELCERGEFANEAELQAHKKLAHQTPPKLSSKSLSTLNTLTCGYCGEVCRSRNELESHTRIQHASNEPGGRHKCNICDEVCLSSTTLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLENVDPQQRLDNSLPHLPAPCVVCRQTLISELECRLHARHHLRTSSGSRSAVSSPTSPGGGKTQSQGCCLCLRDFAADDFVSLPPNPASTSGQPLKVCKTCYMRHSQGLPILNSTTYERAKYDTTWFASKNGQWDSSKDKWDDRGLNVENRSKNEGNTDKKRCEECGVKFEDPEEAEKHRITEHEKISTSGSKPSYTCIQCQVSFPTEAKIQQHVRKEHLETSRRASLEALRCHLCSFEAASPMQLQIHLIEHTFVGCAALSCYLCQSLFTTPIGLQSHLLQEHGLGARPYDCRKCTLKFFFNAELDHHILTFHRPRDEIHPSSVENAREMKNREPDGGVTVKEEVMQGGKEEEEEEEVNVDDQIGQEEHDEAKREEQKLKTEVDIETTSNKMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_00868309;
80% Identity: -