Hass023776.1
Basic Information
- Insect
- Helicoverpa assulta
- Gene Symbol
- -
- Assembly
- GCA_029618815.1
- Location
- CAWLCW010000027.1:5337159-5392080[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-12 4.2e-08 33.8 0.2 4 120 47 163 45 189 0.71 2 2 3.4e-07 0.011 15.9 0.5 331 382 174 225 170 247 0.78
Sequence Information
- Coding Sequence
- ATGCATATGTGCTATGAGAGGCCTGGCCTGGTCACCGCCCTGAACGGAGGCGTTGGGTACGACAAGTGGGACCGGGACAGGGGCGGGgggagcggcggcggcggcggcggcggcggctccgGCGCGTGGGCTGGCCGCGACCGCGAGCGCGACCGCGAGCGCGAGCGGCAGGCGCGCGCGCACCAGATGTCGCAGGCGCACGCCGCCGAGCCCGACGCATCGTCGCTCTTCCCGGCGCCGATCAGGGTGACAGGCAACAGGGATCGCGTGAGCCAGCAGATTCAGACCAAACTCGGCGATTATCACCTCGCGCAGTGGTTCATCGATGACCCTAGCAAATCTATTGGGATCTGCGCCGAACCACCCAGTCCTGCACCATGCCCACCATCGCGGCGAGAAAGCGAGTTCAAGAAGCCCGCGCACGCCCCCCAGAACGGCGTCCGCCATCACCGCCCCCATATCCCACACAACAAGAGCGATGGTTCCAGTTCTACGGGAGCCCCGCACAGACCGCCTCCACTCAGGATACCAAACGGTATCCAGTCACAGAATGCTATGGATAGTCAACCGCCAATAGAAAGTATTTTAAAGGAGATGAAGTCTCTCCCGACGCCGTTGACAGTGATAGCAGCGACGCCGAGGAAAGAATCGGAGAACAAATTCATCTTCAACCCTTACACAAATAAGGTCCAAGAGAATCCTCAGTTGGCCGTCAACGATCTCAAAACCCCCCTTCCTAAACCCGACTCATTAAGAGGCATTAGTCTTCGCGAGTGCGCTGATGTCCCAGTGATTACCATAGCTCCAGACCCGTTAGGAACTTAA
- Protein Sequence
- MHMCYERPGLVTALNGGVGYDKWDRDRGGGSGGGGGGGGSGAWAGRDRERDRERERQARAHQMSQAHAAEPDASSLFPAPIRVTGNRDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPCPPSRRESEFKKPAHAPQNGVRHHRPHIPHNKSDGSSSTGAPHRPPPLRIPNGIQSQNAMDSQPPIESILKEMKSLPTPLTVIAATPRKESENKFIFNPYTNKVQENPQLAVNDLKTPLPKPDSLRGISLRECADVPVITIAPDPLGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00973795; iTF_01094051; iTF_01361636; iTF_00364040; iTF_00120523; iTF_00037829; iTF_00122411; iTF_01439950; iTF_00121455; iTF_00039827; iTF_00038787; iTF_00850755; iTF_00300230; iTF_00036736; iTF_01441108; iTF_00237589; iTF_00809153; iTF_00425398; iTF_01533946; iTF_00123390; iTF_00820096; iTF_00001186; iTF_00302122; iTF_00301188; iTF_01119347; iTF_01118325; iTF_00111674; iTF_01532028; iTF_01338773; iTF_01342230;
- 90% Identity
- iTF_01441108;
- 80% Identity
- -