Basic Information

Gene Symbol
-
Assembly
None
Location
HLhylVes1:2044743-2141537[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-12 2.8e-08 33.9 0.4 2 122 54 174 52 204 0.71
2 2 9.8e-07 0.023 14.3 0.1 341 381 197 237 184 246 0.81

Sequence Information

Coding Sequence
ATGCATATGTGTTATGAGAGGCCCGGCGTCGTCACCGCCCTGAACGGAGCTGTTGGGTACGACAAGTGGGATCGTGACCGGGGCGGGGGCGGGGGCGGCGCGGGCGGCGGCGGGGGCGCGGCTGCAGCGGCCGGCGCCTCCTGGCCTGGCCGGGAGCGCGAGCGGGATCGGGAACGCGAGCGCGAACGCGAGCGGCAGGCGAGAGCCAGCCAGATGTCGCACGCGCACGCCGCCGAGCCGGACGAGTCGTCGCTCTTCTCAGCGCCGTTTAGGGTGACTGGCAACAGAGACAGCGTCAGTCAGCAGATCCAGACGAAGCTAGGCGACTACCACCTGGCGCAATGCTTCATCGAGGACCCCAGCAAGTCTATTGGCATCTGCGCGGAACCACCCAGCCCGGCGCCATGTCCCCCGTCGAGAAGAGAGAGCGAGTTCAAGAAGCCGGCTCACACGATGATGGCCCCGCAGAATGGACGCCTGCACCACCGGGCATACCCTTACAACAAGAGCGATGGGCCAAGCACGACAGGGGCGCCGACTCACCGGCCACCCCCACTCCGCATGCCAAACGGTCTCCAATCACAAAATGCAATCGATAGCAGTTCAGCCGCCATTGAAAGTATTTTGAAGGAGATGAAATCCTTGCCGACGCCGCTGTCGGGGATCGCAGCGACGCCGAGAAAGGAGGCTGAGAACAAATTTATATTCAATCCCTACACTAATAAGGGAGTTGTGTTATTTATTCTATTCTATGTTGGCCCATATTTACTGAGATACAGATGA
Protein Sequence
MHMCYERPGVVTALNGAVGYDKWDRDRGGGGGGAGGGGGAAAAAGASWPGRERERDRERERERERQARASQMSHAHAAEPDESSLFSAPFRVTGNRDSVSQQIQTKLGDYHLAQCFIEDPSKSIGICAEPPSPAPCPPSRRESEFKKPAHTMMAPQNGRLHHRAYPYNKSDGPSTTGAPTHRPPPLRMPNGLQSQNAIDSSSAAIESILKEMKSLPTPLSGIAATPRKEAENKFIFNPYTNKGVVLFILFYVGPYLLRYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00783494;
90% Identity
-
80% Identity
-