Alyc014573.1
Basic Information
- Insect
- Agrochola lychnidis
- Gene Symbol
- -
- Assembly
- GCA_963680765.1
- Location
- OY796855.1:6599281-6641328[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-13 9.6e-09 36.4 0.4 4 118 35 149 33 179 0.72 2 2 1e-05 0.49 11.0 0.3 346 383 177 214 159 240 0.77
Sequence Information
- Coding Sequence
- ATGGGACATAGGGAAAGGTTCACTAGGTACGACAAGTGGGACCGGGACAGGGGCGGGGGGAGCGGCGGCGGAGGCGGCGGGTCAGGCGCGTGGGCTGGCCGCGACCGCGAACGCGACCGCGAGCGCGAGCGACAGGCGCGCGCGCACCAGATGTCGCAGGCGCACGCCGCCGAGCCCGACGCATCGTCGCTCTTCCCGGCGCCGTTCAGGGTTTCAGGCAGGCAGGATCGTGTGAGCCAGCAGATTCAGACCAAGCTTGGCGACTACCACCTCGCGCAGTGGTTTATCGATGATCCCAGCAAATCCATCGGGATCTGTGCTGAACCACCAAGTCCTGCACCATGCCCACCATCTCGGCGAGAGAGCGAGTTCAAGAAGCCGTCACACGCCCCACAGAACGGCGTGCGCCATCACCGCCCCCATATCCCACACAAGAGCGACGGTTCCGGTTCAACGGCAGCCCCGCACAGACCGCCTCCAATCAGGATACCCAACGGTATCCAGTCACAGAATGCTATCGATAGCAGTCAACCGCcaatagaaagtattttaaagGAGATGAAGTCTCTACCGACGCCGTTGTCAGTGATAGCTGCGACGCCGAGGAAGGAATTGGAGAACAAATTCATCTTCAACCCTTATACAAATAAGGTCCAAGAGAACCCTCAGTTGGCCGCCAACGATCTCAAAGCACCCCTACCTAAGCCCGGTAAGTGTCAGTCATTAGAACTTTAA
- Protein Sequence
- MGHRERFTRYDKWDRDRGGGSGGGGGGSGAWAGRDRERDRERERQARAHQMSQAHAAEPDASSLFPAPFRVSGRQDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPCPPSRRESEFKKPSHAPQNGVRHHRPHIPHKSDGSGSTAAPHRPPPIRIPNGIQSQNAIDSSQPPIESILKEMKSLPTPLSVIAATPRKELENKFIFNPYTNKVQENPQLAANDLKAPLPKPGKCQSLEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00783494;
- 90% Identity
- iTF_01441108;
- 80% Identity
- -