Acre016265.1
Basic Information
- Insect
- Apamea crenata
- Gene Symbol
- -
- Assembly
- GCA_949629185.1
- Location
- OX451362.1:12225491-12272001[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-14 2.3e-09 38.1 0.5 4 114 42 152 40 185 0.73 2 2 0.044 1.6e+03 -1.0 0.1 356 382 180 206 176 224 0.77
Sequence Information
- Coding Sequence
- ATGCATTCGATCCAGCAATTTACACAACAGCTTTTCCATTGTAAACGGTACGACAAGTGGGACCGGGACAGGGGCGGGGGGAGCGGCGGCGGAGGCGGCGGGTCAGGCGCGTGGGCCGGCCGCGACCGCGAACGCGACCGCGAGCGCGAGCGGCAGGCGCGCGCGCACCAGATGTCGCAGGCGCACGCCGCCGAGCCCGACGCATCGTCGCTCTTCCCGGCGCCGTTCAGGGTGACAGGCAGGCAGGATCGCGTAAGCCAGCAGATCCAGACCAAGCTTGGCGACTACCACCTCGCGCAGTGGTTCATCGATGACCCCAGCAAATCCATCGGGATCTGTGCTGAACCACCAAGTCCTGCACCATGCCCGCCATCTCGGCGAGAGAGCGAGTTCAAGAAGCCGTCACACGCCCCACAGAACGGCGTGCGCCATCACCGCCCCCATATCCCACACAACAAGAGCGACGGTTCCGGTTCAACGGGAGCCCCGCACAGACCGCCTCCAATCAGGATACCCAACGGTATCCAGTCACAGGAGATGAAGTCTCTACCGACGCCGTTGTCGGTGATAGCTGCGACGCCGAGGAAGGAATTGGAGAACAAATTCATCTTCAACCCTTACACAAATAAGGTCCAAGAGAACCCTCAGTTGGCCGCCAACGATCTCAAAACACCCCTACCTAAGCCCGGTAAGTGTCAATAG
- Protein Sequence
- MHSIQQFTQQLFHCKRYDKWDRDRGGGSGGGGGGSGAWAGRDRERDRERERQARAHQMSQAHAAEPDASSLFPAPFRVTGRQDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPCPPSRRESEFKKPSHAPQNGVRHHRPHIPHNKSDGSGSTGAPHRPPPIRIPNGIQSQEMKSLPTPLSVIAATPRKELENKFIFNPYTNKVQENPQLAANDLKTPLPKPGKCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00783494;
- 90% Identity
- iTF_01441108;
- 80% Identity
- iTF_00123390;