Atri002451.1
Basic Information
- Insect
- Abrostola triplasia
- Gene Symbol
- -
- Assembly
- GCA_946251925.1
- Location
- CAMIUJ010000008.1:2112423-2154215[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-13 3.7e-09 36.5 0.3 3 112 37 146 35 182 0.69 2 2 2.2e-05 0.22 10.9 0.3 346 382 181 217 163 237 0.77
Sequence Information
- Coding Sequence
- ATGGGTATCGAAGTCCAATGCCACCAGACGTACGACAAGTGGGACCGGGACAGGGGCGGGGGGAGCGGCGGCGGCGGCGGCGGGACCGGCGCGTGGGCTGGCCGAGACCGCGAACGCGACCGCGAGCGCGAGCGCGAGCGACAGGCGCGCGCGCACCAGATGTCGCAGGCGCACGCCGCCGAGCCCGACGCATCGTCGCTCTTCCCGGCGCCGTTCAGGGTGACAGGCAACAGGGATCGCGTGAGCCAACAGATACAGACGAAGCTCGGCGACTACCACCTCGCGCAGTGGTTTATCGATGACCCCAGCAAGTCCATCGGCATCTGCGCTGAACCACCCAGTCCTGCACCATGCCCACCGTCGCGGAGAGAGAGCGAGTTCAAGAAGCCGGCACACGCGCCACAGAACGGCGTGCGCCATCACCGCCCCCACGTCCCACACACCAAGAGCGATGGTTCCGGTTCGACGGGAGCCCCGCACAGACCGCCTCCAATCAGGATACCCAACGGTATCCAATCACAGAATGCTATCGATAGCAGTCAACCGCCAATAGAAAGTATTTTGAAGGAGATGAAGTCCCTACCGACGCCGTTGTCAGTGATCGCCGCGACGCCGAGGAAGGAATTGGAGAACAAATTCATCTTTAACCCTTACACGAATAAGGTCCAAGAGAACCCCCAGTTAGCCACCAACGATCTCAAAACACCCCTACCTAAACCCGGTAAGTGA
- Protein Sequence
- MGIEVQCHQTYDKWDRDRGGGSGGGGGGTGAWAGRDRERDRERERERQARAHQMSQAHAAEPDASSLFPAPFRVTGNRDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPCPPSRRESEFKKPAHAPQNGVRHHRPHVPHTKSDGSGSTGAPHRPPPIRIPNGIQSQNAIDSSQPPIESILKEMKSLPTPLSVIAATPRKELENKFIFNPYTNKVQENPQLATNDLKTPLPKPGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00783494;
- 90% Identity
- iTF_01441108;
- 80% Identity
- -