Acla014980.1
Basic Information
- Insect
- Agrotis clavis
- Gene Symbol
- -
- Assembly
- GCA_954870645.1
- Location
- OX940925.1:10598846-10638814[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-13 1e-08 36.4 0.3 4 115 59 170 57 203 0.73 2 2 1.4e-05 0.69 10.6 0.3 346 382 201 237 183 259 0.77
Sequence Information
- Coding Sequence
- ATGACGCTTTTAAAGGCCGTCAACATAAACTTCAGTCTTATTAAAGACAAAAACATTGCCAGGAAATCTGGAAATAGACTTGAGCCGATCAGAGAGAGGTACGACAAGTGGGACCGGGACAGGGGCGGGGGGAGCGGCGGCGGGGGCGGCGGGTCAGGTGCGTGGGCCGGCCGCGACCGCGAACGCGACCGCGAGCGCGAGCGGAAGGCGCGCGCGCACCAGATGTCGCAGGCGCACGCCGCCGAGCCCGACGCATCGACGCTCTTCCCGGCGCCGTTCAGGGTGACAGGCCGGCAGGATCGTGTGAGTCAGCAGATCCAGACCAAGCTCGGCGACTACCACCTCGCGCAGTGGTTCATCGATGACCCCAGCAAATCTATTGGGATCTGCGCTGAACCACCAAGTCCTGCACCATGCCCACCTTCCCGGAGAGAGAGCGAGTTCAAGAAGCCTTCACATGCGCCACAGAACGGCGTGCGCCATCACCGCCCCCATATCCCACACAAGAGCGACGGTTCCGGTTCAACGGGAGCCCCGCACAGACCGCCTCCAATCAGGATACCCAACGGTATCCAGTCACAGAATGCTATCGATAGCAGTCAACCTCCAATAGAAAGTATTTTAAAGGAGATGAAGTCTCTACCGACGCCGTTGTCAGTGATAGCTGCGACGCCGAGGAAGGAATTGGAGAACAAATTCATCTTCAACCCGTACACAAATAAGGTCCAAGAGAACCCTCAGTTGGCCGCCAACGATCTCAAAGCACCCCTACCTAAGCCCGGTAAGTGTGAATACAACTTTACAGTTAGGGTTGccacgaaataa
- Protein Sequence
- MTLLKAVNINFSLIKDKNIARKSGNRLEPIRERYDKWDRDRGGGSGGGGGGSGAWAGRDRERDRERERKARAHQMSQAHAAEPDASTLFPAPFRVTGRQDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPCPPSRRESEFKKPSHAPQNGVRHHRPHIPHKSDGSGSTGAPHRPPPIRIPNGIQSQNAIDSSQPPIESILKEMKSLPTPLSVIAATPRKELENKFIFNPYTNKVQENPQLAANDLKAPLPKPGKCEYNFTVRVATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00783494;
- 90% Identity
- iTF_01441108;
- 80% Identity
- -