Olat002483.1
Basic Information
- Insect
- Oligia latruncula
- Gene Symbol
- -
- Assembly
- GCA_948474745.1
- Location
- OX419700.1:4585083-4629020[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-14 1.2e-09 38.3 0.3 4 114 36 146 34 177 0.73 2 2 0.042 9.8e+02 -1.0 0.0 356 382 174 200 171 218 0.77
Sequence Information
- Coding Sequence
- ATGCCCAACAAGTACAATGCACTTAAGCGGTACGACAAGTGGGACCGGGACAGGGGCGGGGGGAGCGGCGGCGGAGGCGGCGGGTCAGGCGCGTGGGCCGGCCGCGACCGCGAACGCGACCGCGAGCGCGAGCGACAGGCGCGCGCGCACCAGATGTCGCAGGCGCATGCCGCCGAGCCCGACGCATCGTCGCTCTTCCCGGCGCCGTTCAGGGTGACAGGCAGGCAGGATCGCGTGAGCCAGCAGATCCAGACCAAGCTTGGCGACTACCACCTCGCGCAGTGGTTCATCGATGACCCCAGCAAATCCATCGGGATCTGTGCGGAACCACCAAGTCCTGCACCATGCCCACCATCTCGGCGAGAGAGCGAGTTCAAGAAGCCGTCACACGCCCCACAGAACGGCGTGCGCCATCACCGCCCCCATATCCCACACAACAAGAGCGACGGTTCCGGTTCAACGGGAGCCCCGCACAGACCGCCTCCAATCAGGATACCCAACGGTATCCAGTCACAGGAAATGAAGTCTCTACCGACGCCGTTGTCAGTGATAGCTGCGACGCCGAGGAAGGAGTTGGAGAACAAATTCATCTTCAACCCTTACACAAATAAGGTCCAAGAGAACCCTCAGTTGGCCGCCAACGATCTCAAAACACCCCTACCTAAGCCCGGTAAGTGTGAATAG
- Protein Sequence
- MPNKYNALKRYDKWDRDRGGGSGGGGGGSGAWAGRDRERDRERERQARAHQMSQAHAAEPDASSLFPAPFRVTGRQDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPCPPSRRESEFKKPSHAPQNGVRHHRPHIPHNKSDGSGSTGAPHRPPPIRIPNGIQSQEMKSLPTPLSVIAATPRKELENKFIFNPYTNKVQENPQLAANDLKTPLPKPGKCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00783494;
- 90% Identity
- iTF_01441108;
- 80% Identity
- -