Basic Information

Insect: Halictus rubicundus
Gene Symbol: ZNF236
Assembly: GCA_028454235.1
Location: CM052180.1:16511840-16519666[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00092 0.075 13.5 0.6 2 23 165 186 164 186 0.96

2 26 0.00011 0.0088 16.4 1.1 1 23 192 214 192 214 0.98

3 26 1.9e-06 0.00015 22.0 0.7 2 23 220 241 220 241 0.97

4 26 0.0052 0.43 11.1 0.4 3 23 249 269 247 269 0.96

5 26 9.2e-05 0.0075 16.6 1.1 2 23 280 301 280 301 0.98

6 26 7.7e-07 6.3e-05 23.2 1.1 1 23 322 344 322 344 0.99

7 26 6.1e-06 0.00049 20.3 0.7 1 20 350 369 350 372 0.95

8 26 4.9e-05 0.004 17.5 0.5 1 23 378 401 378 401 0.94

9 26 0.00033 0.027 14.9 3.6 1 23 410 433 410 433 0.98

10 26 1.9e-06 0.00016 21.9 2.1 1 23 562 584 562 584 0.98

11 26 0.00033 0.027 14.9 3.3 1 23 590 612 590 612 0.99

12 26 0.0056 0.46 11.0 4.1 1 23 618 640 618 640 0.98

13 26 0.0043 0.35 11.4 6.0 1 23 757 779 757 779 0.98

14 26 4.5e-06 0.00037 20.8 2.7 1 23 785 807 785 807 0.99

15 26 0.00022 0.018 15.5 0.8 3 23 815 835 813 835 0.97

16 26 0.00042 0.034 14.6 7.6 1 23 841 863 841 863 0.98

17 26 0.13 10 6.7 2.7 2 23 1268 1289 1267 1289 0.96

18 26 0.00061 0.05 14.0 1.2 1 23 1295 1317 1295 1317 0.98

19 26 3.4 2.8e+02 2.3 0.2 6 23 1329 1346 1327 1346 0.93

20 26 1.8e-07 1.5e-05 25.1 1.4 2 23 1417 1438 1416 1438 0.98

21 26 0.00029 0.024 15.1 3.5 1 23 1444 1466 1444 1466 0.99

22 26 0.00025 0.021 15.2 1.9 1 23 1472 1494 1472 1494 0.98

23 26 0.0037 0.3 11.6 5.5 1 23 1500 1522 1500 1522 0.98

24 26 5.1e-06 0.00042 20.6 0.6 2 23 1782 1803 1781 1803 0.97

25 26 2.4e-06 0.0002 21.6 3.8 1 23 1809 1831 1809 1831 0.98

26 26 1.9e-06 0.00016 21.9 1.7 1 23 1837 1860 1837 1860 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00092	0.075	13.5	0.6	2	23	165	186	164	186	0.96
2	26	0.00011	0.0088	16.4	1.1	1	23	192	214	192	214	0.98
3	26	1.9e-06	0.00015	22.0	0.7	2	23	220	241	220	241	0.97
4	26	0.0052	0.43	11.1	0.4	3	23	249	269	247	269	0.96
5	26	9.2e-05	0.0075	16.6	1.1	2	23	280	301	280	301	0.98
6	26	7.7e-07	6.3e-05	23.2	1.1	1	23	322	344	322	344	0.99
7	26	6.1e-06	0.00049	20.3	0.7	1	20	350	369	350	372	0.95
8	26	4.9e-05	0.004	17.5	0.5	1	23	378	401	378	401	0.94
9	26	0.00033	0.027	14.9	3.6	1	23	410	433	410	433	0.98
10	26	1.9e-06	0.00016	21.9	2.1	1	23	562	584	562	584	0.98
11	26	0.00033	0.027	14.9	3.3	1	23	590	612	590	612	0.99
12	26	0.0056	0.46	11.0	4.1	1	23	618	640	618	640	0.98
13	26	0.0043	0.35	11.4	6.0	1	23	757	779	757	779	0.98
14	26	4.5e-06	0.00037	20.8	2.7	1	23	785	807	785	807	0.99
15	26	0.00022	0.018	15.5	0.8	3	23	815	835	813	835	0.97
16	26	0.00042	0.034	14.6	7.6	1	23	841	863	841	863	0.98
17	26	0.13	10	6.7	2.7	2	23	1268	1289	1267	1289	0.96
18	26	0.00061	0.05	14.0	1.2	1	23	1295	1317	1295	1317	0.98
19	26	3.4	2.8e+02	2.3	0.2	6	23	1329	1346	1327	1346	0.93
20	26	1.8e-07	1.5e-05	25.1	1.4	2	23	1417	1438	1416	1438	0.98
21	26	0.00029	0.024	15.1	3.5	1	23	1444	1466	1444	1466	0.99
22	26	0.00025	0.021	15.2	1.9	1	23	1472	1494	1472	1494	0.98
23	26	0.0037	0.3	11.6	5.5	1	23	1500	1522	1500	1522	0.98
24	26	5.1e-06	0.00042	20.6	0.6	2	23	1782	1803	1781	1803	0.97
25	26	2.4e-06	0.0002	21.6	3.8	1	23	1809	1831	1809	1831	0.98
26	26	1.9e-06	0.00016	21.9	1.7	1	23	1837	1860	1837	1860	0.96

Sequence Information

Coding Sequence: ATGTTCACACGACACGCTACAATCGCAGAATCTAATCCGGTCGCGGCAGTGCCAATAAATATTGTTGCCACCGAAGATGGTAGGACGCTACTAGCGGTAACAGAAGACAAAGACGGTCTATTGGAAGTAATCGCGACTCCGGTTACTCTTATTGGTCACAACGGTACAGCCGCATCGTTGATGGATATCAAAAATGTAAATGGTTGTTTGATATTACATCCGTCTCCTCTTCAAATTGGTTTGGACTCTGGCGAAGGTTTGGATCTAGAACCGTCCAAGCAAGGTCTCCAAGTCGATTCCAATGCTCCGAGTCGAGTTAAAACCAGAGTAGACTCGGATATGATTAGTGGTTTCCTCGACGACGAGTCGTTGCAGAGAGAGAAGAGTACTGACATTTTTAGGGAAAAGTCGACTGCCACAATCGCGAGAACGAATAGTCCTGGAAGGCCCAAAAAGAGTTCTGCTGTTTCATCGAAAGGCAAAGACGGCTTGAGATGCGATATATGTCAGCAAGAATTTACCAAGCAAGCTCCATATAAAAAACACATGGAGAATCATGCGGAAGAGAAGCCGCATCGCTGCCCAAAATGTTCGGCATCTTTCAATGTACCGACCAACTTTACGCTTCATATGGCTACGCATAATTCTGGTGACCCGAGGTGCCCCGAATGCGGTAAAAAATTTACAAGAATGGCCAGCTTGAAATCTCATATGCTGTTACACGAAAAGGAAGAAAACTTGTTTTGTACGGAGTGCGAAGACGTTTTCTCGACCAAAACTCAATTGGATGCGCATTTGAAACTTCACGGTGAAAAGTGGACAACCGAAGAAGCAAGGAAATGTAAACTGTGTAACAAGCAGTTCAGGCAACCGGCGCTGTATCGACTACACATTCGTGAACATTACAGGTTGCAGACAAAGGTAGTAAAGCAGACAAAAAGAGGGGCGAAACATAAAACGGTATACAAATGTACGATATGCTTAAAGTCCTTCCAAAAGCCAAGCCAATTAATGCGTCACATTCGAGTGCATACGGGTGAGAAACCGTTCAAGTGTACGGTGTGCGGTCGCGCGTTCACGCAAAAGAGTTCTTTGCAAATTCATACGTGGCAGCACAACGGTATACGACCACACGCTTGCGAGCTCTGTAACGCCAGATTTAGTCAAAAAGGCAATTTAAATGCTCATATAACGAGAGTTCACAATGTGCCAGAGGGAGAGCCTATATACAGATGCAACTATTGTTCTTGCGTTTTTAAGAAGCTTGGTAGCTTGAACGGTCACATGAAACGTATGCATACAGGAGTGAACGAGGATAGTGCTACCGTCAGAATCTCCCAATCAGCCGACACCACGGAATCGGACATTCGAGCAACAGTAAACAACGTTATAACGCAACTGGCGTCTTTGGAGTCGAATACGGACCAAGTAGGAAATGGAAAACCGATAAACTTTGGGGGGACTGGGTTATTAGCGAATGTCCCTACCAAGAAAGATATTCTGCAACAAGCACTGAAAAATAGCGGACTACCTAGTAGAAACAAAAGTTTGTGCGATGGTCCATCCGAAGCGAAAAAGTTGGATGCACGCACAAATTTCGTTACCTTGCTGGACCGAGCATCGGATAGCAGTACCAGAAAATACTTGACGATCAAGCAACGGTGTGTAGGAAACATAAGATGGTACGCCTGTACTTTTTGCCATAAGGAGTTCAAGAAACCATCAGACCTGATACGCCATTTACGAGTGCATACGCAAGAGAAACCATTCAAGTGCACGCACTGCTATCGTTCGTTCGCTTTAAAGTCTACCATGATAGCCCACGAGCGTACTCATACAGGTACCAAAAGATACGCCTGCGGCACATGCGACAAAACGTTCACGTGCCACAGTAGCTTGGTTATTCATACGAGATCGCACGGGAACTCTGACGAATGCTTTACCACATCGATAGGTAACGATAACGTTAACGTTAACGTTACTGGTCACGGTCACGGTCACAATCGCAATCGCGAACGCGATCATAATAATGATAACGATAACGATGCCGGTATCGATGCAACGGTCAACGTGGCCGCTCGTTCCAATAATCGACAGAAAATTAACGCAAACAACAAGTCAAAGATGTCAACGAAAACAGAGAGCTTCGCGTCTCAAGTGATATTGCCGGAACCATTGGTAATCAGTGACTCCGGAAACAAGATATGCGTGGTACAGATACCTTCGAAAAAACGTGTTTACGATGCGGCAATCGATCCAGCTAGGCCGCATAAATGTTGGGTGTGCGAAGCAGCATTCCGAAAAATCAGTCATTTGAAACAACACCATCGAAGACACACCGGAGAACGTCCTTATAGGTGTTCCAAGTGTGACAGGAGGTTCACGTCAAACAGTGTTTTGAAATCGCATTTGAACACACACGAAGACTCCAGACCTTACGGGTGTTCCATTTGTACCGCGAAATTTTCTACGCAAAGTAGCATGAAAAGACATTTGGTTACTCACAGTAACAAACGACCGTTTATGTGTCCGTATTGTCACAAGACGTTCAAGACTTACGTTAATTGCCGTAAACATATGAAGATACACAAACACGAGTTGGCGCAACGGCAACTGGAGCAACAGAAACTGGTATCCCAAGAACAGACTACAAGCAAGTTGAACGCGAAGGAAAACTCTAAACAAGAAACAACGTCCGAGATGTCTTGCTGCTCTCCGTCCAATTTTCCTTCCGGTAACGTTAACGATGTTCCTCTTGACGTGTCTGCGAACACCGGCACCGGCACCGGCACAGGCACCGGCACAGGCACCGTTGTCACAACAACTTCAACGTTTGCCGACAATTCGCTGTCTTCGGTCAACTTATCTTTCCAAGAACGAGCGGGATCAACCTTTTCACGTACTTTCCCGCATCAATTTCAAAGTGTGATTGAGCCAAAGGAAAAAATAAGGCCACTTTTATCAACGAACTTTGCCGCTTCGACATCAATTAATCAGAATATGACTGAAATAACCGTGACAAATTTAGAAAATCCACAAATGTTGCACATCGACGAAAGCGGTTCGGTTACATTGCCAGTTTATTCGACCGATCAAGCTCTAACACCGGAGAGCATACAAGAGATCGAGGAGACATTGAACCAGCAGCTTTTCAACATCGGAGTGAACCTTGGTTTGGAAAGCGACCATTCGAAACATTCCTGCGATACCAGTGTATTGCAGGATGCGAAATTGCAACATCCGCAACCTGCGTTAAATGTCATTTACACGAGTAACAACAATTCTAATCACGGTAACAACACGGAACAGTCTGAAGAGCAAGTGTTCGCGTCGCAACTAGATTCGTTTGAAATTGATCATATTACTTTGCAACCGGATGCTGACATGACACTGGACAATATTGGCCTCGAAAGGAATAATTCGACGAGTATGGCAAGCATATTGCCGCAAAACGTAAAAGCAGAGTTATCGAATCAACTTGCCATTTCTGCTGTTTCGCCTGAGAATTTGACCGACGGTCGCCAAGCAACTGGGTACATGCCAACTGTGTTGCTAATTTCCGAGGAAAATCTTGCAGGAAAAGGAAATGCGAGCGATCAATTGAAAATGCGCGAGACCGAAAAGAATGCGGGTGAAGGACGATGCGTTGTCAACGATCCAACCTTCTTAACGGAACAATTTGGTAGGACGTCCAAGGTTTCGCCAGAGAGCCAGGATAGAGCATCTTTGTCGTTCGAGTCGTCTCTTTGTCGAAACGATGAAATCAACGGAAATCAATCGCAACAGGGAGAGTCATTGTTGCAGTGCCATATGTGTAGCCAGCAAGGATTTACGGCAACCAAGTTAAAGGAGCACTTGAAGACCCACCGCGGGAAAAAGGAATATCAGTGTACGGAATGCTCTTCAAGGTTTTACACAAACGGTGGATTAAACAGACACTCGAAAATACATACGAATAAACAACACTGGAAGAGTAGTCCGTCGTGCGAAAAATATCTCGATAGTAGAACGCAATTGCGATCGCACAGCAAGGTTCACGAAAGCTTCCCGTGGAACGAGAAGGATGTTTCAATTTTGTCGCAAATACCAGCGACGCTAGATAACGAATCGTCGTTGAACGACGTCGCGATAGATTCAGATTCAACCGTGTCCGAAAGAGTTCTGTTGGATACGGTCGTGGAACGAGAGGTGATGGATCGAATACAGCACGCAGCGACGGAGAAGAAGGAACGAAAGGAGTATACGAATAAATGTAAATATTGTCCGAAAACGTTTCGTAAGCCAAGCGATCTCGTCAGACACGTCCGTACGCACACGGGGGAACGTCCATACAAATGTGACTATTGCAACAAAAGTTTCGCTGTAAAGTGCACGTTGGATTCTCATACCAAAGTTCATACCGGCAAAAAGACGTTTCGTTGTCATGTGTGCAGCAGTTTATTCGCAACGAAGGGTAGCTTGAAAGTTCACATGCGTTTGCATACAGGTTCGAAACCGTTCACATGTCATATCTGCGATTCGAGATTCCGAACCTCGGGGCATAGAAAAGTACATTTGTTGAAACACGCCCGAGAGCACAAAGGTAATTTCAAGAGGAAACAAAAACATTTGAAGGTTGCTGCCATAGCAGAAGTCGCTATGGCGGCAGATATTGAAAAATCTGGCGATGCTGATCGACAAAAAGTGTGTAGCTACGgacaagaaaaagaatcacaacagcggcagcagcaacagcaacagcaagagcaacagcaacagcaagagcagcagctacagcagcagcaagaacagcagcataatcaccaccgctatgagcaaacaacagaggcagaataTTCGAATTTACAAACAATTAACGTCGAAACAACTGCTTCGTGTTTAGCCGACCAAATCACATTCGAATCGGAGGGATCCGTTTCAAACAATAATTCGATACTGTCCGTAAACGAAGGTAACCAATTGGTGGCCAACTTACATTTTCTTCTGACGAACGGTCTCGTTACCATACAGACCGCAGAGTCGTTGTTATCGCAGCCGACATCGGCTGGCAATACTCTGCATCAACATTCGACTGTAGTCGCCGATTCCGTCTGCGCATCGATGATCAATATTACCACCCCCGAGATCGGTACCAACCAAAGTATTGCTGCTAAAGAAACGATTTATGCAGAGAACGCATTGAAAGCGCAACTATCGTCTCCGTATCAATTGCAGTCGAACAACTGTCTGTTAACGAGCGTTGCCGTGCCGTCGCGGACAGAACAGTTCCCAAAGGTTTCGACCGTTGAGAAGTGTTTGTCGACACTAGAGAAACCATCTACCAAAGGAAATCCGTCGAAGAAAGAGTGCGACGTTTGTGGGAAAACGTTCACGAAACCGTATCAAGTTGAACGTCATAAACGAATTCACACTGGCGAGCGACCGTACAAGTGCGATTTATGTGACAAGTCGTTCGCTCAAAAATCCACGTTACAGATGCATCAAAAACACCATACAGGCGATCGACCGCATCCTTGTCCTCGCTGCGAATATTCTTTCACGCAAAAAGGCAATCTTCGCACACACATGAACCGCGTTCATCGGCTGGATACCGTCGACTCGAAAAAAACAAAACATAGTCCACAGTCGTTGCAACGCAAGTCTCCAGAGAGTAATTTGACCGAGGTTAAAAGTCTGAATTTAGACGACATATCGTTTATTGAATTTCTTAAATAA
Protein Sequence: MFTRHATIAESNPVAAVPINIVATEDGRTLLAVTEDKDGLLEVIATPVTLIGHNGTAASLMDIKNVNGCLILHPSPLQIGLDSGEGLDLEPSKQGLQVDSNAPSRVKTRVDSDMISGFLDDESLQREKSTDIFREKSTATIARTNSPGRPKKSSAVSSKGKDGLRCDICQQEFTKQAPYKKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNSGDPRCPECGKKFTRMASLKSHMLLHEKEENLFCTECEDVFSTKTQLDAHLKLHGEKWTTEEARKCKLCNKQFRQPALYRLHIREHYRLQTKVVKQTKRGAKHKTVYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACELCNARFSQKGNLNAHITRVHNVPEGEPIYRCNYCSCVFKKLGSLNGHMKRMHTGVNEDSATVRISQSADTTESDIRATVNNVITQLASLESNTDQVGNGKPINFGGTGLLANVPTKKDILQQALKNSGLPSRNKSLCDGPSEAKKLDARTNFVTLLDRASDSSTRKYLTIKQRCVGNIRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHTGTKRYACGTCDKTFTCHSSLVIHTRSHGNSDECFTTSIGNDNVNVNVTGHGHGHNRNRERDHNNDNDNDAGIDATVNVAARSNNRQKINANNKSKMSTKTESFASQVILPEPLVISDSGNKICVVQIPSKKRVYDAAIDPARPHKCWVCEAAFRKISHLKQHHRRHTGERPYRCSKCDRRFTSNSVLKSHLNTHEDSRPYGCSICTAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKLVSQEQTTSKLNAKENSKQETTSEMSCCSPSNFPSGNVNDVPLDVSANTGTGTGTGTGTGTVVTTTSTFADNSLSSVNLSFQERAGSTFSRTFPHQFQSVIEPKEKIRPLLSTNFAASTSINQNMTEITVTNLENPQMLHIDESGSVTLPVYSTDQALTPESIQEIEETLNQQLFNIGVNLGLESDHSKHSCDTSVLQDAKLQHPQPALNVIYTSNNNSNHGNNTEQSEEQVFASQLDSFEIDHITLQPDADMTLDNIGLERNNSTSMASILPQNVKAELSNQLAISAVSPENLTDGRQATGYMPTVLLISEENLAGKGNASDQLKMRETEKNAGEGRCVVNDPTFLTEQFGRTSKVSPESQDRASLSFESSLCRNDEINGNQSQQGESLLQCHMCSQQGFTATKLKEHLKTHRGKKEYQCTECSSRFYTNGGLNRHSKIHTNKQHWKSSPSCEKYLDSRTQLRSHSKVHESFPWNEKDVSILSQIPATLDNESSLNDVAIDSDSTVSERVLLDTVVEREVMDRIQHAATEKKERKEYTNKCKYCPKTFRKPSDLVRHVRTHTGERPYKCDYCNKSFAVKCTLDSHTKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFTCHICDSRFRTSGHRKVHLLKHAREHKGNFKRKQKHLKVAAIAEVAMAADIEKSGDADRQKVCSYGQEKESQQRQQQQQQQEQQQQQEQQLQQQQEQQHNHHRYEQTTEAEYSNLQTINVETTASCLADQITFESEGSVSNNNSILSVNEGNQLVANLHFLLTNGLVTIQTAESLLSQPTSAGNTLHQHSTVVADSVCASMINITTPEIGTNQSIAAKETIYAENALKAQLSSPYQLQSNNCLLTSVAVPSRTEQFPKVSTVEKCLSTLEKPSTKGNPSKKECDVCGKTFTKPYQVERHKRIHTGERPYKCDLCDKSFAQKSTLQMHQKHHTGDRPHPCPRCEYSFTQKGNLRTHMNRVHRLDTVDSKKTKHSPQSLQRKSPESNLTEVKSLNLDDISFIEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00024746; iTF_00762694; iTF_00860556; iTF_00861332; iTF_00866837; iTF_00862719; iTF_00866155; iTF_00863405; iTF_00864111; iTF_00862032; iTF_00865467;
90% Identity: iTF_00762694;
80% Identity: -