Basic Information

Insect: Lasioglossum pauxillum
Gene Symbol: ZNF236
Assembly: GCA_028455745.1
Location: CM052305.1:24793871-24802524[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0047 0.53 11.4 0.4 2 23 163 184 162 184 0.96

2 25 0.00012 0.013 16.4 1.1 1 23 190 212 190 212 0.98

3 25 2e-06 0.00022 22.0 0.7 2 23 218 239 218 239 0.97

4 25 0.0056 0.63 11.1 0.4 3 23 247 267 245 267 0.96

5 25 9.8e-05 0.011 16.6 1.1 2 23 278 299 278 299 0.98

6 25 8.2e-07 9.2e-05 23.2 1.1 1 23 320 342 320 342 0.99

7 25 6.5e-06 0.00073 20.4 0.7 1 20 348 367 348 370 0.95

8 25 5.3e-05 0.0059 17.5 0.5 1 23 376 399 376 399 0.94

9 25 0.00036 0.04 14.9 3.6 1 23 408 431 408 431 0.98

10 25 2.1e-06 0.00023 21.9 2.1 1 23 560 582 560 582 0.98

11 25 0.00035 0.039 14.9 3.3 1 23 588 610 588 610 0.99

12 25 0.006 0.68 11.0 4.1 1 23 616 638 616 638 0.98

13 25 0.0046 0.51 11.4 6.0 1 23 759 781 759 781 0.98

14 25 5.2e-05 0.0058 17.5 4.8 1 23 787 809 787 809 0.99

15 25 0.00023 0.026 15.5 0.8 3 23 817 837 815 837 0.97

16 25 0.00018 0.021 15.8 5.4 1 23 843 865 843 865 0.98

17 25 0.21 24 6.1 1.9 2 23 1260 1281 1259 1281 0.96

18 25 0.0014 0.16 13.0 1.5 1 23 1287 1309 1287 1309 0.97

19 25 2e-07 2.2e-05 25.1 1.4 2 23 1409 1430 1408 1430 0.98

20 25 0.00081 0.091 13.8 3.5 1 23 1436 1458 1436 1458 0.99

21 25 0.00027 0.031 15.3 1.9 1 23 1464 1486 1464 1486 0.98

22 25 0.0016 0.18 12.8 3.6 1 23 1492 1514 1492 1514 0.98

23 25 5.5e-06 0.00061 20.6 0.6 2 23 1757 1778 1756 1778 0.97

24 25 3.4e-05 0.0039 18.1 3.6 1 23 1784 1806 1784 1806 0.98

25 25 1.9e-06 0.00021 22.0 1.5 1 23 1812 1835 1812 1835 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0047	0.53	11.4	0.4	2	23	163	184	162	184	0.96
2	25	0.00012	0.013	16.4	1.1	1	23	190	212	190	212	0.98
3	25	2e-06	0.00022	22.0	0.7	2	23	218	239	218	239	0.97
4	25	0.0056	0.63	11.1	0.4	3	23	247	267	245	267	0.96
5	25	9.8e-05	0.011	16.6	1.1	2	23	278	299	278	299	0.98
6	25	8.2e-07	9.2e-05	23.2	1.1	1	23	320	342	320	342	0.99
7	25	6.5e-06	0.00073	20.4	0.7	1	20	348	367	348	370	0.95
8	25	5.3e-05	0.0059	17.5	0.5	1	23	376	399	376	399	0.94
9	25	0.00036	0.04	14.9	3.6	1	23	408	431	408	431	0.98
10	25	2.1e-06	0.00023	21.9	2.1	1	23	560	582	560	582	0.98
11	25	0.00035	0.039	14.9	3.3	1	23	588	610	588	610	0.99
12	25	0.006	0.68	11.0	4.1	1	23	616	638	616	638	0.98
13	25	0.0046	0.51	11.4	6.0	1	23	759	781	759	781	0.98
14	25	5.2e-05	0.0058	17.5	4.8	1	23	787	809	787	809	0.99
15	25	0.00023	0.026	15.5	0.8	3	23	817	837	815	837	0.97
16	25	0.00018	0.021	15.8	5.4	1	23	843	865	843	865	0.98
17	25	0.21	24	6.1	1.9	2	23	1260	1281	1259	1281	0.96
18	25	0.0014	0.16	13.0	1.5	1	23	1287	1309	1287	1309	0.97
19	25	2e-07	2.2e-05	25.1	1.4	2	23	1409	1430	1408	1430	0.98
20	25	0.00081	0.091	13.8	3.5	1	23	1436	1458	1436	1458	0.99
21	25	0.00027	0.031	15.3	1.9	1	23	1464	1486	1464	1486	0.98
22	25	0.0016	0.18	12.8	3.6	1	23	1492	1514	1492	1514	0.98
23	25	5.5e-06	0.00061	20.6	0.6	2	23	1757	1778	1756	1778	0.97
24	25	3.4e-05	0.0039	18.1	3.6	1	23	1784	1806	1784	1806	0.98
25	25	1.9e-06	0.00021	22.0	1.5	1	23	1812	1835	1812	1835	0.96

Sequence Information

Coding Sequence: ATGTTGACACGACACGCTATAATCACAGAATCTAACCCGGTCGCGACAGTGCCAATAAATATTGTTGCTACCGAAGATGGTAGAACGCTACTAGCAGTGACAGAAGACAAAGACGGTTTATTGGAAGTTATCGCGACTCCGGTTACTCTTATTGGTCACAACGGCACAGCTGGGTCGTTGATGGACATCAAGAATGGTTGTTTGATATTACATCCGTCTCCTCTCCAGATTGGTTTAGACTCTGGCGAAGGTTTGGATCTCGAACTGTCCAAGCAATGTGTCCGAGTTGATTCCGATGATCCAAGTCAAATCAAAACCAAAGTAGGCTCAGATACGATTAGTGGTTTCCTTGATGACGAGTCTTCGCAGAGAGAGAAGAGCAACGAAATTGTTAAAGGGAAGTCGACTGCCATGATCGCAAGAACAAATAGTCTTGGACGACCCAAAAAGAGCTCTGCCGTTGCATCGAAAGGTAAAGAGGGCTTGAGATGCGACATATGTCAGCAAGAATTTTCCAAGCTAGCTCCATATAAAAAGCACATGGACAATCATGCGGAAGAGAAGCCACATCGCTGTCCAAAATGTTCGGCATCTTTCAATGTACCGACAAACTTCACGCTTCACATGGCTACACATAATTCTGGTGACCCGAGGTGCCCTGAGTGTGGTAAAAAATTTACAAGAATGGCCAGCTTAAAATCTCATATGCTGTTACACGAGAAGGAAGAGAACTTGTTTTGTACGGAGTGCGAAGACGTTTTCTCGACCAAAACTCAATTGGATGCGCATTTAAAACTTCACGGAGAAAAGTGGACAACCGAAGAAGCAAGGAAATGTAAACTGTGTAATAAGCAGTTCAGGCAACCGGCATTGTATCGACTACACATTCGTGAACATTACAGGTTGCAGACAAAGGTAGTAAAGCAGACAAAAAGAGGGGCCAAACATAAAACGGTATACAAATGTACGATATGCTTAAAATCCTTCCAAAAGCCAAGCCAATTAATGCGTCACATTCGAGTGCATACGGGTGAGAAGCCGTTCAAGTGTACGGTGTGCGGCCGTGCGTTCACACAAAAGAGTTCTTTACAAATTCATACGTGGCAGCACAACGGTATACGACCCCATGCTTGCGAGCTCTGTAACGCCAGATTTAGTCAGAAAGGCAATTTAAATGCTCATATAACGAGAGTTCACAACGTGCCAGAGGGAGAGCCTATATACAGATGCAACTATTGTTCTTGCGTTTTTAAGAAGCTTGGCAGCTTGAATGGTCACATGAAACGTATGCATACAGGAGTGAACGAGGACAGTGCTACCGTCAGAATCTCCGAATCAGCCGACACCATGGAATCGGACATACGAGCAACAGTAAACAACGTTATAACGCAACTGGCGTCTTTAGAGTCGAATACGGACGAAGTTGAAAATGGAAAACCAGAAAACTTCGAGGGGACCGGGTTATTAGCAAATGTACCTACCAAGAAAGATATTCTACAACAAGCACTAAAAAATAGCGGATTACCTAGTAGAAACAAAAGTTTGTGCGATGATCCATCCGAAGCAAAAAAGTTGGATGCACGCACAAATTTCGTTACCTTGCTGGACCGAGCATCGGATAGCGGTACCAGAAAATACCTGACAATAAAGCAACGATGTGTAGGGAACATAAGATGGTACGCGTGTACGTTTTGCCATAAAGAGTTTAAGAAACCATCAGACCTGATACGCCATTTACGAGTGCATACGCAGGAAAAACCATTCAAGTGCACGCACTGTTATCGTTCTTTCGCTTTAAAGTCTACCATGATAGCACACGAGCGTACTCATACAGGTACCAAGAGATATGCCTGCGGTACTTGCGATAAAACGTTCACGTGCCACAGTAGCTTGGTTATTCATACAAGATCGCACGGGAACTCTGACGAATGTTTTAGCATATCGATTGGTAACGGTAACGATAATGATAACGGTACTGGCCATGATCACGGTCACGGTCACGGTCATGATCACGATCATAATAACGATAACGATAACAACACCGATAACGGTAATGCCGATATTGACGCAACCGTTAACGTAGTCGCTCGTTGCAGTAATCGACAGAAAATTAAGGCAAACAAGTCAAAGATGTCTCCGAAAACAGAGAGCCTCGCGTCTCAAGTGATACTGCAGGAGCCGTTGGTAATCAGTGACTCCGGAAACAAGATATGCGTGGTACAGATACCTTCGAAAAAGCGTGTTTACGATGCTGGAATCGATCCAGCTAGACCGCATAAATGTTGGGTGTGCGAAGCGGCATTTCGAAAAATCAGTCATTTGAAGCAACACCATCGACGACATACCGGAGAACGTCCTTATAGATGTTCCAAATGCGACAGGAGATTCACGTCGAACAGTGTTTTGAAATCGCATTTGCACACGCACGAAGATTCCAGACCTTACGGGTGTTCCATTTGTACCGCAAAATTTTCTACGCAGAGTAGCATGAAAAGACATTTGGTTACTCACAGTAACAAACGACCGTTCATGTGTCCATATTGTCAGAAGACGTTCAAGACTTACGTGAATTGCCGTAAACATATGAAAATACACAAACACGAGTTGGTGCAAGGGCAACTGGAGCAAGAAAAACTGCTGTCGCAAGAACAGACTATGAATAAGTTGAATGCGAAGGAGAGCTCTAAACAAGAAACAACGACCGAGCTATCTTGCTGCCCTCCGTCCAGTTTTCCTTCCGGTAACGTTAACGATGTTCCACTCGACGTGTCTGCAAATACCGACACCGGCACCGGCACCGTTATCGCAACAACTTCCACGTTTTCCGACAATCCGCTGTCTTCGGTCAACTTATCTTTCCAAGAACGAATGGGATCAACCTTTCCACATACTTTCCCGCATCAATTTCAAAGTGTGATCGAAGCGAAAGAGAAAATAAGGCCACTTTTATCAACGAACTTCGCCACTTCGACATCTATTAATCAAAATATGACTGAGATAACCGTGACAAATCTAGAAAATCCACAGATGTTGCACATCGATGAAAGCGGTTCGGTTACATTACCAGTCTATTCGACCGATCAAGCACTAACACCGGAGAGCATGCAAGAAATCGAAGAGACATTGAACCAGCAGCTTTTTAACATCGGAATGAACCTTGGTTTGGGAAGCGACCATTCGAAACATTCCTGTGATACCAGTGAATTGGAGAATGCAAAATTGCAGCATCAGCAACCTGCGTTAAATGTCATTTACACGAGTAACAACAATTCTAATAACGGTAACAACACGGAACAGTCTGAAGAGCAAGTGTTCGCGTCGCAGCTGGACTCGTTCGAGATTGATCATATTACTTTGCAACCGGATGCTGAAATGACACTGGACAATATTGGCCTCGAAACGAATAATTCGACAAGTATGGCAAGCATATTGCCGCAAAGTGTGAAAGGAGAGTTATCGAATCAACTTGCCATTTCGGCTGTTTCGCCTGAGAATCTGACCGACGGTCACCAAGCAAGTGGGTACATGCAAACCGTGTTGCTAATTTCCGAGCAAAATCTTACAGTAAAAGGAAATGCGAGCGATCAATTGAAAATACGCGAGACTGAAAAGAATGCGGATGGAGTCGTCAACGATCCAACGTTCTTAACGGAACAGTTTCGGGGGACGTCCAAGGTTTCGTCAAAGAGCCAGAAAGTATCTTTGTCGTTCGAGTCGTCTCTTTGTCCAAACGATGAGATCATCTCAAATCAATCGCAACAGGGGGAATCTTTGTTGCAGTGCCATATGTGTAGCCAGCAAGGATTTACGGCAACCAAGTTGAAGGAGCACTTGAAGATCCATCGCGGTAAGAAGGAATATCAGTGTACGGAATGCTCTTCAAGATTTTACACGAACGGTGGATTAAACAGACACTCGAAACTACATACGAATAAACAACAGTGGAAGAGTAGTTCGTCATGCGAAAAATATCTCGGTGATAGAACGCAATCGCGATCGCATAGCAAGGTTCATGAGAGCTTCCCGTGGAACGAGAAGGATGTTTCAATTTTGTCACAAATACCGGCAACGGTAGATAACGAATCGTCGTTGAACGACGTAACAATAGATTCCGATTCAACCGTGTCCGAAAGAGTTCTGTTGGACACGGTTGCGGAACGAGAGGTGATGGATCGAATACAGCACGTAGCAACGGAGGAAAAGGAACGAAAGGAGTACACGAATAAATGTAAATATTGTCCGAAAACTTTTCGTAAACCAAGCGATCTCGTTAGACACGTCCGTACGCACACAGGGGAACGTCCATACAAGTGCGACTATTGCAGCAAAAGTTTCGCTGTAAAGTGCACGTTGGATTCTCACACTAAAGTTCATACCGGCAAAAAGACGTTTCGTTGTCACGTGTGTAGCAGTTTGTTCGCGACGAAGGGCAGCTTGAAAGTACACATGCGTTTGCATACAGGTTCGAAACCGTTCAAATGTTCCATCTGCGATTCGAGATTCCGAACCTCGGGGCATAGGAAAGTACATTTGTTGAAACACGCCCGAGAACACAAAGGTAATTTCAAGAGGAAACAAAAACATTTGAAAGTTGCTGCCATTGCAGAAGTCGCTATGGCGACAGATATTGAAAAATCTGGCGATGCTGGTCGACAAGAGGTGTGCAGCTACGAAGAAGAACAAGAATCGCAACAGCAACAGCAAGAACAGGAGGATAATCAGCAGCACTATGAGCAAACGTCGCAAACAACAGAGGCAGAATATTCGAATTTGCAAGCAATTAACGTCGAGACAACTGCTTCGTGTTTAACCGACCAAATCACATTCGAGGCGGAGGGATCCGTTCCAAACAATAATTCGATACTGTCCGTAAGCGACGGTAACCAATTAGTGGCCAACTTACATTTTCTTCTGGCGAACGGTCTCGTTACCATACAGACTGACGAATCGTTATTAACCCAGCCGGCATCGACTGGCAATACACTGCATCAACAATCGACCGTTGTCGCCGATTCCGTCTGCGCATCGATGATCAATATTACCCCTGAGATCGGTACCAACCAAAGTATTGCTGCTAAAGAAACGATTCACGCGGAGAACGCATTGAAAGCGCAACTATCGTCTCCGTATCAATTGCAGTCAAACAACTGTCTTTTAACCAGCGTTGCAGCACCGTCGCGGATAGAACAGTTCGCAAAGGTTCCGACCGTTGAGAAGTGTTTGCCGACACTAGAGAAACCCTCTACCAAAGGAACTCCGTCGAAGAAAGAGTGCGACGTTTGTGGGAAAACGTTCACGAAACCGTATCAAGTCGAACGTCATAAACGAATTCACACGGGCGAACGACCGTACAAGTGCGATTTATGTGTCAAATCGTTCGCTCAAAAATCCACGTTACAAATGCATCAAAAGCACCATACAGGCGATCGACCACATCCTTGTCCACGCTGTGAATATTCTTTCACACAAAAAGGCAATCTTCGCACGCACATGAACCGCGCTCATCGGCTGGATACTGTCGACTCGAAAAAACCGAAACATAATCAACAGTCGTTGCAACGCAAGTCTCCGGAGAGAAATTTGACCGAGGTTAAAAGTCTGAATTTAGATGATATGTCGTTCATTGAATTTCTTAAATAA
Protein Sequence: MLTRHAIITESNPVATVPINIVATEDGRTLLAVTEDKDGLLEVIATPVTLIGHNGTAGSLMDIKNGCLILHPSPLQIGLDSGEGLDLELSKQCVRVDSDDPSQIKTKVGSDTISGFLDDESSQREKSNEIVKGKSTAMIARTNSLGRPKKSSAVASKGKEGLRCDICQQEFSKLAPYKKHMDNHAEEKPHRCPKCSASFNVPTNFTLHMATHNSGDPRCPECGKKFTRMASLKSHMLLHEKEENLFCTECEDVFSTKTQLDAHLKLHGEKWTTEEARKCKLCNKQFRQPALYRLHIREHYRLQTKVVKQTKRGAKHKTVYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACELCNARFSQKGNLNAHITRVHNVPEGEPIYRCNYCSCVFKKLGSLNGHMKRMHTGVNEDSATVRISESADTMESDIRATVNNVITQLASLESNTDEVENGKPENFEGTGLLANVPTKKDILQQALKNSGLPSRNKSLCDDPSEAKKLDARTNFVTLLDRASDSGTRKYLTIKQRCVGNIRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHTGTKRYACGTCDKTFTCHSSLVIHTRSHGNSDECFSISIGNGNDNDNGTGHDHGHGHGHDHDHNNDNDNNTDNGNADIDATVNVVARCSNRQKIKANKSKMSPKTESLASQVILQEPLVISDSGNKICVVQIPSKKRVYDAGIDPARPHKCWVCEAAFRKISHLKQHHRRHTGERPYRCSKCDRRFTSNSVLKSHLHTHEDSRPYGCSICTAKFSTQSSMKRHLVTHSNKRPFMCPYCQKTFKTYVNCRKHMKIHKHELVQGQLEQEKLLSQEQTMNKLNAKESSKQETTTELSCCPPSSFPSGNVNDVPLDVSANTDTGTGTVIATTSTFSDNPLSSVNLSFQERMGSTFPHTFPHQFQSVIEAKEKIRPLLSTNFATSTSINQNMTEITVTNLENPQMLHIDESGSVTLPVYSTDQALTPESMQEIEETLNQQLFNIGMNLGLGSDHSKHSCDTSELENAKLQHQQPALNVIYTSNNNSNNGNNTEQSEEQVFASQLDSFEIDHITLQPDAEMTLDNIGLETNNSTSMASILPQSVKGELSNQLAISAVSPENLTDGHQASGYMQTVLLISEQNLTVKGNASDQLKIRETEKNADGVVNDPTFLTEQFRGTSKVSSKSQKVSLSFESSLCPNDEIISNQSQQGESLLQCHMCSQQGFTATKLKEHLKIHRGKKEYQCTECSSRFYTNGGLNRHSKLHTNKQQWKSSSSCEKYLGDRTQSRSHSKVHESFPWNEKDVSILSQIPATVDNESSLNDVTIDSDSTVSERVLLDTVAEREVMDRIQHVATEEKERKEYTNKCKYCPKTFRKPSDLVRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFKCSICDSRFRTSGHRKVHLLKHAREHKGNFKRKQKHLKVAAIAEVAMATDIEKSGDAGRQEVCSYEEEQESQQQQQEQEDNQQHYEQTSQTTEAEYSNLQAINVETTASCLTDQITFEAEGSVPNNNSILSVSDGNQLVANLHFLLANGLVTIQTDESLLTQPASTGNTLHQQSTVVADSVCASMINITPEIGTNQSIAAKETIHAENALKAQLSSPYQLQSNNCLLTSVAAPSRIEQFAKVPTVEKCLPTLEKPSTKGTPSKKECDVCGKTFTKPYQVERHKRIHTGERPYKCDLCVKSFAQKSTLQMHQKHHTGDRPHPCPRCEYSFTQKGNLRTHMNRAHRLDTVDSKKPKHNQQSLQRKSPERNLTEVKSLNLDDMSFIEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763369;
90% Identity: iTF_00862032;
80% Identity: -