Basic Information

Insect: Halictus quadricinctus
Gene Symbol: ZNF236
Assembly: GCA_028454245.1
Location: CM052123.1:13760813-13768654[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.001 0.083 13.5 0.6 2 23 165 186 164 186 0.96

2 26 0.00012 0.0097 16.4 1.1 1 23 192 214 192 214 0.98

3 26 2.1e-06 0.00017 22.0 0.7 2 23 220 241 220 241 0.97

4 26 0.0058 0.47 11.1 0.4 3 23 249 269 247 269 0.96

5 26 0.0001 0.0083 16.6 1.1 2 23 280 301 280 301 0.98

6 26 8.6e-07 6.9e-05 23.2 1.1 1 23 322 344 322 344 0.99

7 26 6.7e-06 0.00055 20.3 0.7 1 20 350 369 350 372 0.95

8 26 5.5e-05 0.0044 17.5 0.5 1 23 378 401 378 401 0.94

9 26 0.00037 0.03 14.9 3.6 1 23 410 433 410 433 0.98

10 26 2.2e-06 0.00017 21.9 2.1 1 23 562 584 562 584 0.98

11 26 0.00036 0.03 14.9 3.3 1 23 590 612 590 612 0.99

12 26 0.0063 0.51 11.0 4.1 1 23 618 640 618 640 0.98

13 26 0.0048 0.38 11.4 6.0 1 23 763 785 763 785 0.98

14 26 5.4e-05 0.0044 17.5 4.8 1 23 791 813 791 813 0.99

15 26 0.00024 0.02 15.5 0.8 3 23 821 841 819 841 0.97

16 26 0.00046 0.038 14.6 7.6 1 23 847 869 847 869 0.98

17 26 0.14 11 6.7 2.7 2 23 1273 1294 1272 1294 0.96

18 26 0.00068 0.055 14.0 1.2 1 23 1300 1322 1300 1322 0.98

19 26 3.7 3e+02 2.3 0.1 6 23 1334 1351 1332 1351 0.93

20 26 2e-07 1.7e-05 25.1 1.4 2 23 1423 1444 1422 1444 0.98

21 26 0.00032 0.026 15.1 3.5 1 23 1450 1472 1450 1472 0.99

22 26 0.00028 0.023 15.2 1.9 1 23 1478 1500 1478 1500 0.98

23 26 0.0033 0.26 11.9 5.9 1 23 1506 1528 1506 1528 0.98

24 26 5.7e-06 0.00046 20.6 0.6 2 23 1783 1804 1782 1804 0.97

25 26 2.7e-06 0.00022 21.6 3.8 1 23 1810 1832 1810 1832 0.98

26 26 2.2e-06 0.00018 21.9 1.7 1 23 1838 1861 1838 1861 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.001	0.083	13.5	0.6	2	23	165	186	164	186	0.96
2	26	0.00012	0.0097	16.4	1.1	1	23	192	214	192	214	0.98
3	26	2.1e-06	0.00017	22.0	0.7	2	23	220	241	220	241	0.97
4	26	0.0058	0.47	11.1	0.4	3	23	249	269	247	269	0.96
5	26	0.0001	0.0083	16.6	1.1	2	23	280	301	280	301	0.98
6	26	8.6e-07	6.9e-05	23.2	1.1	1	23	322	344	322	344	0.99
7	26	6.7e-06	0.00055	20.3	0.7	1	20	350	369	350	372	0.95
8	26	5.5e-05	0.0044	17.5	0.5	1	23	378	401	378	401	0.94
9	26	0.00037	0.03	14.9	3.6	1	23	410	433	410	433	0.98
10	26	2.2e-06	0.00017	21.9	2.1	1	23	562	584	562	584	0.98
11	26	0.00036	0.03	14.9	3.3	1	23	590	612	590	612	0.99
12	26	0.0063	0.51	11.0	4.1	1	23	618	640	618	640	0.98
13	26	0.0048	0.38	11.4	6.0	1	23	763	785	763	785	0.98
14	26	5.4e-05	0.0044	17.5	4.8	1	23	791	813	791	813	0.99
15	26	0.00024	0.02	15.5	0.8	3	23	821	841	819	841	0.97
16	26	0.00046	0.038	14.6	7.6	1	23	847	869	847	869	0.98
17	26	0.14	11	6.7	2.7	2	23	1273	1294	1272	1294	0.96
18	26	0.00068	0.055	14.0	1.2	1	23	1300	1322	1300	1322	0.98
19	26	3.7	3e+02	2.3	0.1	6	23	1334	1351	1332	1351	0.93
20	26	2e-07	1.7e-05	25.1	1.4	2	23	1423	1444	1422	1444	0.98
21	26	0.00032	0.026	15.1	3.5	1	23	1450	1472	1450	1472	0.99
22	26	0.00028	0.023	15.2	1.9	1	23	1478	1500	1478	1500	0.98
23	26	0.0033	0.26	11.9	5.9	1	23	1506	1528	1506	1528	0.98
24	26	5.7e-06	0.00046	20.6	0.6	2	23	1783	1804	1782	1804	0.97
25	26	2.7e-06	0.00022	21.6	3.8	1	23	1810	1832	1810	1832	0.98
26	26	2.2e-06	0.00018	21.9	1.7	1	23	1838	1861	1838	1861	0.96

Sequence Information

Coding Sequence: ATGTTGACACGACACGCTATAATCGCAGAATCTAATGCGGTCGCGGCAGTGCCAATAAATATTGTTGCCACCGAAGATGGTAAGACGCTACTAGCAGTAACAGAAGACAAAGACGGTCTATTGGAAGTTATCGCGACTCCGGTTACTCTTATTGGTCACAACGGTACTGCCGCATCGTTGATGGATATCAAAAATGTAAATGGTTGTTTGATATTACATCCGTCTCCTCTTCAAATTGGTTTGGACTCTGGCGAAGGTTTGGATCTAGAACCGTCCAAGCAAGGTCTCCAAGTCGATTCCAATGCTCCGAGTCGAGTTAAAACCAGAGTAGACTCGGATATGATTAGTGGTTTCCTCGACGACGAGTCTTCGCAGAGAGAGAAGAGTACTGAAATTTTTAGGGAAAAGTCGACTGCCACAATCGCGAGAACGAATAGTCCTGGAAGGCCCAAAAAGAGCTCCCCCGTTTCATCGAAAGGCAAAGAGGGCTTGAGATGCGATATATGTCAGCAAGAATTTACCAAGCAAGCTCCATATAAAAAACACATGGAGAATCATGCGGAAGAGAAGCCGCATCGCTGCCCAAAATGTTCGGCATCTTTCAATGTACCGACCAACTTTACGCTTCATATGGCTACCCATAATTCTGGTGACCCGAGGTGCCCCGAATGCGGTAAAAAATTTACAAGAATGGCCAGCTTGAAATCTCATATGCTATTACACGAAAAGGAAGAAAACTTGTTTTGTACGGAGTGCGAAGACGTTTTCTCGACCAAAACTCAATTGGATGCGCATTTGAAACTTCACGGTGAAAAGTGGACAACCGAAGAAGCAAGGAAATGTAAACTGTGTAACAAACAGTTCAGGCAACCGGCGCTGTATCGACTACACATTCGTGAACATTACAGATTGCAGACAAAGGTGGTAAAGCAGACAAAAAGAGGGGCGAAACATAAAACGGTATACAAATGTACGATATGCTTAAAGTCCTTCCAAAAGCCAAGCCAATTAATGCGTCACATTCGAGTGCATACGGGTGAGAAACCGTTCAAGTGTACGGTGTGCGGTCGCGCGTTCACGCAAAAGAGTTCTTTGCAAATTCATACGTGGCAGCACAACGGTATACGACCACATGCTTGCGAGCTCTGTAACGCCAGATTTAGTCAAAAAGGCAATTTAAATGCTCATATAACGAGAGTTCACAATGTGCCAGAGGGAGAGCCTATATACAGATGCAACTATTGTTCTTGCGTTTTTAAGAAGCTTGGTAGCTTGAACGGTCACATGAAACGTATGCATACAGGAGTGAACGAGGATAGTGCTACCGTCAGAATCTCCCAATCAGCCGACACCACGGAATCGGACATTCGAGCAACAGTAAACAACGTTATAACGCAACTGGCGTCTTTGGAGTCGAATACGGACGAAGTAGGAAATGGAAAACCGGTGAACTTTGGGGAGACTGGGTTATTGGCGAATGTCCCTACCAAGAAAGATATTCTGCAACAAGCATTGAAAAATAGCGGACTACCTAGTAGAAACAAAAGTTTGTGCGATGGTCCATCCGAAGCGAAAAAGTTGGATGCACGCACAAATTTCGTTACCTTGCTGGACCGAGCATCGGATAGCGGTACCAGAAAATACTTGACGATAAAGCAACGGTGTGTAGGAAATATAAGATGGTACGCCTGTACTTTTTGCCATAAGGAGTTCAAGAAACCATCAGATCTGATACGCCATTTACGAGTGCATACGCAAGAGAAACCATTCAAGTGCACGCACTGCTATCGTTCGTTCGCTTTAAAGTCTACCATGATAGCCCATGAGCGTACTCATACAGGTACGAAGAGATACGCCTGCGGTACATGCGATAAAACGTTCACGTGCCACAGTAGCTTGGTTATTCATACGAGATCGCACGGGAACTCtgacgaatgctttaccatatcgataggtaacgataacgataacgttaacgttactagtcacggtcacggtcacggtcacggtcacaatcgcaatcgcaatcgcgaacgcgatcataataatgataacgataacgatgccggtATCGATGCAACGGTCAACGTGGCCGCTCGTTCCAATAATCGACAGAAAATTAACGCAAACAACAAGTCAAAGATGTCAACGAAAACGGAGAGCTTTGCGTCTCAAGTGATATTGCCGGAACCGTTGGTAATCAGTGACTCCGGCAACAAGATATGCGTGGTACAGATACCTTCGAAAAAACGTGTTTACGATGCGGCAATCGATCCAGCTAGGCCGCATAAATGTTGGGTGTGCGAAGCAGCATTCCGAAAAATCAGTCATTTGAAACAACACCATCGAAGACACACCGGAGAACGTCCTTATAGGTGTTCCAAGTGTGACAGGAGGTTCACGTCAAACAGTGTTTTGAAATCGCATTTGCACACACACGAAGACTCCAGACCTTACGGGTGTTCCATTTGTACCGCGAAATTTTCTACGCAAAGTAGCATGAAAAGACATTTGGTTACTCACAGTAACAAACGACCGTTTATGTGTCCATATTGTCACAAGACGTTCAAGACTTACGTTAATTGCCGTAAACATATGAAGATACACAAACACGAGTTGGCGCAACGGCAACTGGAGCAACAGAAACTGGTATCCCAAGAACAGACTACAAACAAGTTGAACGCGAAGGAAAACTCTAAACAAGAAACAACGACCGAGATGTCTTGCTGCTCTCCGTCCAATTTTCCTTCCGGTAACGTTAACGATGTTCCTCTTGACGTGTCTGCGAACACCGGCACCGGCACCGGCACCGGCACAGACACCGTTGTCACAACAACTTCCACGTTTGCCGACAATCCGCTGTCTTCGGTCAACTTATCTTTCCAAGAACGAGTGGGATCAACCTTTTCACGTACTTTCCCGCATCAATTTCAAAGTGTGATTGAGCCAAAGGAAAAAATAAGGCCACTTTTATCAACGAACTTTGCCGCTTCGACATCAATTAATCAGAATATGACTGAAATAACCGTGACAAATTTAGAAAATCCACAAATGTTGCACATCGACGAAAGCGGTTCGGTTACATTGCCAGTTTATTCGACCGATCAAACTCTAACACCGGAGAGCATACAAGAGATCGAGGAGACATTGAACCAACAGCTTTTCAACATCGGAGTGAACCTTGGTTTGGAAAGCGACCATTCGAAACATTCCTGCGATACCAGTGTATTGCAGGATGCGAAATTGCAACATCCGCAACCCGCGTTAAATGTCATTTACACGAGTAACAACAATTCTAATCACGGTAACAACACGGAACAGTCTGAAGAGCAAGTGTTCGCGTCGCAACTAGATTCGTTCGAAATTGATCATATTACTTTGCAACCGGATGCTGACATGACACTGGACAATATTGGCCTCGAAAGGAATAATTCGACGAGTATGGCAAGCATATTGCCGCAAAGCGTAAAAGGAGAGTTATCGAATCAACTTGCCATTTCTACTGTTTCGCCTGAGAATTTGACCGACGGTCGCCAAGCAAGGGGATACATGCCAACTGTGTTGCTAATTTCCGAGGAAAGTCTTGCAGGAAAAGGAAATGCGAGCGATCAATTGAAAATCCGCGAGACCGAAAAGAATGCGGGTGAAGGAGGACGATGCGTTGTCAACGATCCAACCTTCTTAACGGAACAATTTCGTAGGACGTCCAAGGTTTCGCCAGAGAGCCAGGATAGAGCATCTTTGTCGTTCGAGTCGTCTCTTTGTCGAAACGATGAAATCAACGCAAATCAATCGCAACAGGGAGAGTCATTGTTGCAGTGCCACATGTGTAGCCAGCAAGGATTTACGGCAACCAAGTTGAAGGAGCACTTGAAGACCCACCGCGGGAAAAAGGAATATCAGTGTACGGAATGCTCTTCAAGATTTTACACGAACGGTGGATTAAACAGACACTCGAAAATACATACGACTAAACAACACTGGAAGAGTATTCCGTCGTGCGAAAAATATCTCGACAGTAGAACGCAATTGCAATCGCACAGCAAGGTTCACGAAAGCTTCCCGTGGAACGAGAAAGATGTTTCAATTTTGTCGCAAATACCAGCGACGCTAGATAACGAATCGTCGAACTTGAACGACGTCGCGATAGATTCAGATTCAACCGTGTCCGAAAGAGTTCTGTTGGATACGGTCGCGGAGCGAGAGGTGATGGATCGAATACAGCACGTAGCGACCGAGAAGAAGGAACGAAAGGAGTATACGAATAAATGTAAATATTGTCCGAAAACGTTTCGTAAGCCAAGCGATCTCGTCAGACACGTCCGTACGCACACGGGGGAACGTCCATACAAGTGTGACTATTGCAACAAAAGTTTCGCTGTAAAGTGCACGTTGGATTCTCATACCAAAGTTCATACCGGCAAAAAGACGTTTCGTTGTCATGTGTGCAGCAGTTTGTTTGCAACGAAGGGTAGCTTGAAAGTTCACATGCGTTTGCATACAGGTTCGAAACCGTTCAAATGTCATATCTGCGATTCGAGATTCCGAACCTCGGGACATAGAAAAGTACATTTGTTGAAACACGCCCGAGAGCACAAAGGTAATTTCAAGAGGAAACAGAAACATTTGAAGGTTGCTGCCATAGCAGAAGTCGCTATGGCGACAGATATTGAAAAATCTGGCGATGCTGATCGacaaaaggtgtgtagctacagacaagaaaaagaatcacaacagcggcagcagcaacaacaacaacagcagcagctacagcagcagcagcagcaagaacagcagcataatcaccaccgctatgagcaaacaacagaggcagaatattccaaTTTACAAACAATTAACGTCGAAACAACTGCTTCGTGTTTAGCCGACCAAATCACATTCGAATCGGAGGGATCCGTTTCAAACAACAATTCCATACTGTCCGTAAACGAAGGTAACCAATTGGTGGCCAACTTACATTTTCTTCTGACGAACGGTCTCGTTACCATACAGACCGCAGAGTCGTTGTTATCGCAGCCGACATCGGCTGGCAATACTCTGCATCAACATTCGACTGTAGTCGCCGATTCCGACTGCGCATCGATGATCAATATTACCACCCCCGAGATCGGTACCAACCAAAGTATTGCTGCTAAAGAAACGATTCATGCAGAGAACGCATTGAAAGCGCAACTATCGTCTCCGTATCAATTGCAGTCGAACAACTGTCTGTTAACGAGCGTTGCCGTGCCGTCGAGGACAGATCAGTTCCCAAAGGTTTCGACCGTTGAGAAGTGTTTGTCGACACTAGAGAAACCATCTACCAAAGGAAATCCGTCGAAGAAAGAGTGCGACGTTTGTGGGAAAACGTTCACGAAACCGTATCAAGTTGAACGTCATAAACGAATTCACACGGGCGAGCGACCGTACAAGTGCGATTTATGTGACAAGTCGTTCGCTCAAAAATCCACGTTACAGATGCATCAGAAACATCATACAGGCGATCGACCGCATCCTTGTCCTCGCTGCGAATATTCTTTCACGCAAAAAGGCAATCTTCGCACGCACATGAACCGCGTTCATCGGCTGGATACCGTCGACTCGAAAAAAACAAAACATAATCCACAGTCGTTGCAACGCAAGTCTCCGGAGAGCAATTTGACCGAGGTTAAAAGTCTGAATTTAGACGACATATCGTTCATTGAATTTCTTAAATAA
Protein Sequence: MLTRHAIIAESNAVAAVPINIVATEDGKTLLAVTEDKDGLLEVIATPVTLIGHNGTAASLMDIKNVNGCLILHPSPLQIGLDSGEGLDLEPSKQGLQVDSNAPSRVKTRVDSDMISGFLDDESSQREKSTEIFREKSTATIARTNSPGRPKKSSPVSSKGKEGLRCDICQQEFTKQAPYKKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNSGDPRCPECGKKFTRMASLKSHMLLHEKEENLFCTECEDVFSTKTQLDAHLKLHGEKWTTEEARKCKLCNKQFRQPALYRLHIREHYRLQTKVVKQTKRGAKHKTVYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACELCNARFSQKGNLNAHITRVHNVPEGEPIYRCNYCSCVFKKLGSLNGHMKRMHTGVNEDSATVRISQSADTTESDIRATVNNVITQLASLESNTDEVGNGKPVNFGETGLLANVPTKKDILQQALKNSGLPSRNKSLCDGPSEAKKLDARTNFVTLLDRASDSGTRKYLTIKQRCVGNIRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHTGTKRYACGTCDKTFTCHSSLVIHTRSHGNSDECFTISIGNDNDNVNVTSHGHGHGHGHNRNRNRERDHNNDNDNDAGIDATVNVAARSNNRQKINANNKSKMSTKTESFASQVILPEPLVISDSGNKICVVQIPSKKRVYDAAIDPARPHKCWVCEAAFRKISHLKQHHRRHTGERPYRCSKCDRRFTSNSVLKSHLHTHEDSRPYGCSICTAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKLVSQEQTTNKLNAKENSKQETTTEMSCCSPSNFPSGNVNDVPLDVSANTGTGTGTGTDTVVTTTSTFADNPLSSVNLSFQERVGSTFSRTFPHQFQSVIEPKEKIRPLLSTNFAASTSINQNMTEITVTNLENPQMLHIDESGSVTLPVYSTDQTLTPESIQEIEETLNQQLFNIGVNLGLESDHSKHSCDTSVLQDAKLQHPQPALNVIYTSNNNSNHGNNTEQSEEQVFASQLDSFEIDHITLQPDADMTLDNIGLERNNSTSMASILPQSVKGELSNQLAISTVSPENLTDGRQARGYMPTVLLISEESLAGKGNASDQLKIRETEKNAGEGGRCVVNDPTFLTEQFRRTSKVSPESQDRASLSFESSLCRNDEINANQSQQGESLLQCHMCSQQGFTATKLKEHLKTHRGKKEYQCTECSSRFYTNGGLNRHSKIHTTKQHWKSIPSCEKYLDSRTQLQSHSKVHESFPWNEKDVSILSQIPATLDNESSNLNDVAIDSDSTVSERVLLDTVAEREVMDRIQHVATEKKERKEYTNKCKYCPKTFRKPSDLVRHVRTHTGERPYKCDYCNKSFAVKCTLDSHTKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFKCHICDSRFRTSGHRKVHLLKHAREHKGNFKRKQKHLKVAAIAEVAMATDIEKSGDADRQKVCSYRQEKESQQRQQQQQQQQQLQQQQQQEQQHNHHRYEQTTEAEYSNLQTINVETTASCLADQITFESEGSVSNNNSILSVNEGNQLVANLHFLLTNGLVTIQTAESLLSQPTSAGNTLHQHSTVVADSDCASMINITTPEIGTNQSIAAKETIHAENALKAQLSSPYQLQSNNCLLTSVAVPSRTDQFPKVSTVEKCLSTLEKPSTKGNPSKKECDVCGKTFTKPYQVERHKRIHTGERPYKCDLCDKSFAQKSTLQMHQKHHTGDRPHPCPRCEYSFTQKGNLRTHMNRVHRLDTVDSKKTKHNPQSLQRKSPESNLTEVKSLNLDDISFIEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763369;
90% Identity: iTF_00763369;
80% Identity: -