Basic Information

Insect: Lasioglossum calceatum
Gene Symbol: ZNF236
Assembly: GCA_963966675.1
Location: OZ016550.1:2955904-2963974[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0015 0.16 13.1 0.6 2 23 165 186 164 186 0.96

2 25 0.00013 0.014 16.4 1.1 1 23 192 214 192 214 0.98

3 25 2.2e-06 0.00024 22.0 0.7 2 23 220 241 220 241 0.97

4 25 0.0061 0.66 11.1 0.4 3 23 249 269 247 269 0.96

5 25 0.00011 0.012 16.7 1.1 2 23 280 301 280 301 0.98

6 25 9e-07 9.8e-05 23.2 1.1 1 23 322 344 322 344 0.99

7 25 7.1e-06 0.00077 20.4 0.7 1 20 350 369 350 372 0.95

8 25 5.7e-05 0.0063 17.5 0.5 1 23 378 401 378 401 0.94

9 25 0.00039 0.043 14.9 3.6 1 23 410 433 410 433 0.98

10 25 2.3e-06 0.00025 21.9 2.1 1 23 560 582 560 582 0.98

11 25 0.00038 0.042 14.9 3.3 1 23 588 610 588 610 0.99

12 25 0.0066 0.72 11.0 4.1 1 23 616 638 616 638 0.98

13 25 0.005 0.54 11.4 6.0 1 23 748 770 748 770 0.98

14 25 5.6e-05 0.0062 17.5 4.8 1 23 776 798 776 798 0.99

15 25 0.00025 0.028 15.5 0.8 3 23 806 826 804 826 0.97

16 25 0.0002 0.022 15.8 5.4 1 23 832 854 832 854 0.98

17 25 1.1 1.2e+02 4.0 2.8 2 23 1249 1270 1248 1270 0.96

18 25 0.00057 0.062 14.4 1.4 1 23 1276 1298 1276 1298 0.98

19 25 2.1e-07 2.3e-05 25.2 1.4 2 23 1398 1419 1397 1419 0.98

20 25 0.00088 0.096 13.8 3.5 1 23 1425 1447 1425 1447 0.99

21 25 0.0003 0.032 15.3 1.9 1 23 1453 1475 1453 1475 0.98

22 25 0.0017 0.19 12.9 3.6 1 23 1481 1503 1481 1503 0.98

23 25 6e-06 0.00065 20.6 0.6 2 23 1745 1766 1744 1766 0.97

24 25 3.8e-05 0.0041 18.1 3.6 1 23 1772 1794 1772 1794 0.98

25 25 4.4e-06 0.00048 21.0 1.5 1 23 1800 1823 1800 1823 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0015	0.16	13.1	0.6	2	23	165	186	164	186	0.96
2	25	0.00013	0.014	16.4	1.1	1	23	192	214	192	214	0.98
3	25	2.2e-06	0.00024	22.0	0.7	2	23	220	241	220	241	0.97
4	25	0.0061	0.66	11.1	0.4	3	23	249	269	247	269	0.96
5	25	0.00011	0.012	16.7	1.1	2	23	280	301	280	301	0.98
6	25	9e-07	9.8e-05	23.2	1.1	1	23	322	344	322	344	0.99
7	25	7.1e-06	0.00077	20.4	0.7	1	20	350	369	350	372	0.95
8	25	5.7e-05	0.0063	17.5	0.5	1	23	378	401	378	401	0.94
9	25	0.00039	0.043	14.9	3.6	1	23	410	433	410	433	0.98
10	25	2.3e-06	0.00025	21.9	2.1	1	23	560	582	560	582	0.98
11	25	0.00038	0.042	14.9	3.3	1	23	588	610	588	610	0.99
12	25	0.0066	0.72	11.0	4.1	1	23	616	638	616	638	0.98
13	25	0.005	0.54	11.4	6.0	1	23	748	770	748	770	0.98
14	25	5.6e-05	0.0062	17.5	4.8	1	23	776	798	776	798	0.99
15	25	0.00025	0.028	15.5	0.8	3	23	806	826	804	826	0.97
16	25	0.0002	0.022	15.8	5.4	1	23	832	854	832	854	0.98
17	25	1.1	1.2e+02	4.0	2.8	2	23	1249	1270	1248	1270	0.96
18	25	0.00057	0.062	14.4	1.4	1	23	1276	1298	1276	1298	0.98
19	25	2.1e-07	2.3e-05	25.2	1.4	2	23	1398	1419	1397	1419	0.98
20	25	0.00088	0.096	13.8	3.5	1	23	1425	1447	1425	1447	0.99
21	25	0.0003	0.032	15.3	1.9	1	23	1453	1475	1453	1475	0.98
22	25	0.0017	0.19	12.9	3.6	1	23	1481	1503	1481	1503	0.98
23	25	6e-06	0.00065	20.6	0.6	2	23	1745	1766	1744	1766	0.97
24	25	3.8e-05	0.0041	18.1	3.6	1	23	1772	1794	1772	1794	0.98
25	25	4.4e-06	0.00048	21.0	1.5	1	23	1800	1823	1800	1823	0.96

Sequence Information

Coding Sequence: ATGTTGACACGACACGCTATAATCACAGAATCTAACCCGGTCGCGACAGTACCAATAAATATTGTTGCTACCGAAGATGGTAGAACGCTACTAGCAGTGACAGAAGACAAAGACGGTCTATTGGAAGTTATCGCGACTCCGGTCACTCTTATTGGTCATAATGGCACAGCCGGGTCATTGATGGATATCAAGAATGTAAATGGTTGTTTGATATTACATCCGTCTCCTCTTCAAATTGGTTTGGACTCCGAGGAAGGTTTGGATCTAGAACTGTCCAAGCAATGTGTCCGAGTCGATTCCAATGATCCGAGTCAAATCAAAACCAAAGTAGGCTCGGATACAATTAGTGGTTTTCTTGACGACGAGTCTttggagagagagaagagcaaTGAAATTGTTAAAGGGAAGTCGACTGCCATGATCGCGAGAACGAATAGTCTTGGAAGACCCAGAAAGAGCTCTGCCGTTGCATCGAAAAGTAAAGAGGGCTTGAGGTGCGACATATGTCAGCAAGAATTTTCCAAGCAAGCTCCATATAAAAAGCACATGGACAATCATGCAGAGGAGAAGCCGCATCGCTGCCCAAAATGTTCGGCATCTTTCAATGTACCGACAAACTTCACGCTTCACATGGCTACACATAATTCTGGCGACCCGAGGTGCCCTGAGTGTGGTAAAAAATTCACAAGAATGGCCAGCTTAAAATCTCATATGCTGTTACACGAGAAGGAAGAGAACTTGTTTTGTACGGAGTGCGAAGACGTTTTCTCGACCAAAACTCAATTGGATGCGCATTTGAAACTTCACGGAGAAAAGTGGACGACCGAAGAAGCAAGGAAATGTAAACTGTGTAATAAGCAGTTCAGGCAACCGGCGTTGTATCGACTACACATTCGCGAACATTACAGGTTGCAGACAAAGGTAGTAAAGCAGACGAAAAGAGGGGTCAAACATAAAACGGTATACAAATGTACGATATGCTTAAAATCCTTCCAAAAGCCAAGCCAATTAATGCGTCACATTCGAGTGCATACGGGTGAGAAGCCGTTCAAGTGTACGGTGTGCGGCCGAGCGTTCACGCAAAAGAGTTCTTTACAAATTCACACGTGGCAGCACAACGGCATACGACCCCATGCTTGCGAGCTCTGTAACGCCAGATTTAGTCAGAAAGGCAATTTAAATGCTCATATAACGAGAGTTCACAATGTGCCAGAGGGAGAGCCTATATACAGATGCAACTATTGTTCTTGCGTTTTCAAGAAGCTCGGCAGCTTGAACGGTCACATGAAACGTATGCATACAGGAGTGAACGAGGACAGTGCTACCGTCAGAATCTCCGAATCAGCCGACACCATGGAATCGGACATACGAGCAACAGTTAACAACGTTATAACCCAACTGGCATCTTTAGAGTCGAACACGGACGAAAATGAAAAACCAGAAAACTTCGGGGAGACCGGGTTATTAGCAAATGTCCCTACCAAGAAAGATATTCTACAACAAGCACTAAAAAATAGCGGGTTACCTAGCAGAAACAAGAGTTTGTGCGACGATCCATCCGAAGCAAAAAAGTTGGATGCACGCACAAATTTCGTTACCTTGTTGGACCGAGCATCGGATAACGGTACCAGAAAATACCTGACGATAAAGCAACGGTGTGTAGGGAACATAAGATGGTACGCGTGTACGTTTTGCCATAAAGAGTTCAAGAAACCATCAGACCTGATACGCCATTTACGGGTGCATACGCAGGAAAAACCATTCAAGTGCACGCACTGTTATCGTTCTTTCGCTTTAAAGTCTACCATGATAGCGCACGAGCGTACTCATACAGGTACCAAGAGATACGCCTGCGGTACTTGCGATAAAACGTTCACGTGCCACAGTAGCTTGGTTATTCATACAAGATCGCACGGGAACTCTGACGAATGTTTTAGCATATCGATTGGTAACGGTAACGATAATGATAACGGTGCTGGCCATGATCACGGTCACGGCCACGATCATAATAATGATAACGATAACGGTAATGCTGATATTGACGCAACCGTTAACGTAATCGCTCGTTCCAGTAATCGACAGAAAATCAAGTCGAAGATGTCTCCGAAAACGGAGAGCCTTGCGTCTCAAGTGATACTGCCGGAGCCGTTGGTAATCAGTGACTCCGGGAACAAGATATGCGTGGTACAGATACCTTCGAAAAAGCGTGTTTACGATGCCGCAATCGATCCAGCTAGGCCGCATAAATGTTGGGTGTGCGAAGCGGCATTTCGAAAAATcagtcatttgaagcaacaccATCGACGACACACCGGAGAACGTCCTTACAGGTGTTCCAAATGCGACAGGAGATTCACGTCGAACAGTGTTTTGAAATCGCATTTGCACACACACGAAGACTCCAGACCTTACGGGTGTTCCATTTGCACCGCAAAGTTTTCCACGCAGAGTAGCATGAAAAGACATTTAGTTACTCACAGTAACAAACGACCGTTCATGTGTCCGTATTGTCAAAAGACGTTCAAGACTTACGTGAATTGCCGTAAACATATGAAAATACACAAACACGAGTTGGTGCAACGGCAACTGGAGCAACAAAAACTGGTGTCGCAGGAACAGACTACGAATAAATTGAATGCGAAGGAGAGCAttgaacaagaaacaacgtcaGAGCTATCTTGCTGCTCTCCGTCCAGTTTTCCTTCCGGTAACGTTAACGATGTTCCACTCGACGTGTCCGTAAATACCGACACCGACACCGGCACCGTAGTCGCAACAACTTCCACGTTTTCCGACGATCCGCTGCCTTCGGTCAACTTATCTTTCCAAGAACGAATGGGATCAACCTTTCCGCATACTTTCCCGCATCAATTTCAAAGTGTGATCGAAGCGAAAGAGAAAATAAGGCCACTTTTATCAACGAACTTCGCCACTTCGACATCTATTAATCAAAATATGACTGAGATAACCGTGACAAATCTAGAAAATCCACAGATGTTGCACATCGATGAAAGCGGTTCGGTTACGTTACCAGTTTATTCGACCGATCAAGCTCTAACACCAGAGAGCATACAAGAAATCGAAGAGACATTGAACCAGCAGCTTTTCAACATCGAAATGAACCTTGGTTTGGGAAGCGACCATTCGAAACATTCCTGTGACACCAACGAATTGCAGAATGCAAAATTGCAGCATCAGCAACCTGCGTTAAATGTCATCTACACGAGCAACAACAATTCTAATAACGGCAACAACGCGGAACAGTCTGAAGAGCAAGTGTTCGCGTCGCAGCTAGATTCGTTCGAGATTGATCATATTACTTTGCAACCGGATGCTGAAATGACACTGGACAATATTGGCCTCGAAACGAATAATTCGGCGAGTATGGCCAGCATATTGCCGCAAAGCGTGAAAGGAGAATTATCGAATCAACTTGCCATTTCGGCTGTTTCGCCTGAGAATCTGACCGACGGTCACCAAGCAAGTGGGTACATGCAAACTGTGTTGCTAATTTCCGAGCAGAATCTTACAGTAAAAGGAAATGCGAGCGATCAATTGAAAATGCACGAGACTGAAAAGAATGCGGATGGAGTCGTCAACGATCCAACGTTCTTAACGGAACAGTTCCGGAGGACGTCCAAGGTTTCGTCAAAGAGCCAGAAAGTATCTTTGTCGTTCGAGTCATCTCTTTGTCCAAACGATGAGATCAACCTAAATCAATCGCAACAGGGGGAGTCTTTGTTGCAGTGCCATATGTGCAGCCAGCAAGGATTTACGACAACCAAGTTGAAGGAGCACTTGAAGATCCATCGCGGTAAGAAGGAATACGAGTGCACGGAATGCTCTTCAAGATTTTACACGAACGGTGGATTAAACAGACACTCGAAAACACATACGAATAAACAACACTGGAAGAGTAGTTCGTCGTGCGAAAAATATCTCGGCGATAGAACGCAATCGCGATCGCATAGCAAGGTTCACGAGAGCTTCTCGTGGAACGAGAAGGATGTTTCAATTTTGTCGCAAATACCGGCAACGGTAGATAACGAATCGTCGTTGAACGACGTCACAATAGATTCCGATTCAACCGTGTCCGAAAGAGTTCTGTTGGACACGGTTGCGGAACGAGAGGTGATGGATCGAGTACAGCACGTAGCAACGGAGAACAAGGAACGAAAGGAGTACACGAATAAATGTAAATATTGCCCGAAAACGTTTCGTAAACCAAGCGATCTCGTTAGACACGTCCGTACGCACACGGGGGAACGTCCGTACAAGTGCGACTATTGCAGCAAAAGTTTCGCTGTGAAGTGCACGTTGGATTCTCACACTAAAGTTCACACCGGCAAAAAGACGTTCCGTTGTCACGTGTGTAGTAGTTTGTTCGCGACGAAGGGCAGCTTGAAAGTACACATGCGTTTGCATACAGGTTCGAAACCGTTCAAATGTTCCATCTGCGATTCGAGATTCCGAACCTCGGGGCACAGGAAAGTACATTTGTTGAAGCACGCCCGAGAACACAAAGGTAATTTCAAGAGGAAACAAAAACATTTGAAAGTTGCTGCCATAGCAGAAGTCGCTATGGCGACGGACATTGAAAAATCCGTCGATGCTGATCGACAAGAGGTGTGCAGCTACGTAGAAGAACCAGAAtcgcaacagcaacagcaagaACAGCAGGATAATCACCAGCACTATGAGCAAACGTCGCAAACGACAGAGGCAGAATATTCGACTTTGCAAGCCATTAACGTCGAAACAACTGCCTCGTGTTTAACCGACCAAATCACATTCGAATCGGAGGGATCCGTTCCAAACAACTCGATACTGTCCGTGAGCGACGGTAACCAATTGGTGGCCAACTTACATTTCCTTCTGGCGAACGGTCTCGTTACCATACAGACTGCAGAACCGTTATTAACCCAGCCGGCATCGACCGGCGATACGCTGCACCAACAATCGACTGTTGTCGCCGATTCCGTCTGCGCATCGATGATCAATATTACCCCTGAGATCGGTACCAACCAAAGTATTGCTGCTAAAGAAACGATTCACGCGGAGAACGCATTGAAAGCGCAACTATCGTCTCCGTACCAATTGCAGTCGGACAACTGTCTTCTAACCAGCGTTGCAGCGCCATCGCAGATAGAACAGTTCGCAAAGGTTCCGACCGTTGAGAAGTGTTTACCGACGCTGGAGAAACCCTCTGCCAAAGGAACTCCGTCGAAGAAAGAGTGCGACGTTTGTGGGAAAACGTTCACGAAACCGTATCAAGTCGAACGCCATAAACGAATTCACACGGGCGAACGACCGTACAAGTGCGATTTATGTGTCAAATCGTTCGCTCAAAAGTCCACGTTACAGATGCATCAAAAGCACCATACAGGCGATCGACCACATCCCTGTCCACGCTGCGAATATTCTTTCACACAAAAAGGCAATCTTCGCACGCACATGAGCCGCGCTCATCGGCTGGATACCGTCGACTCGAGAAAAACGAAACATAATCAACAGCCGTTGCAACGCAAGTCTCCGGAGAGAAATTTGACCGAGGTTAAAAGTCTGAATTTAGATGACATGTCGTTCATCGAATTTCTTAAATAA
Protein Sequence: MLTRHAIITESNPVATVPINIVATEDGRTLLAVTEDKDGLLEVIATPVTLIGHNGTAGSLMDIKNVNGCLILHPSPLQIGLDSEEGLDLELSKQCVRVDSNDPSQIKTKVGSDTISGFLDDESLEREKSNEIVKGKSTAMIARTNSLGRPRKSSAVASKSKEGLRCDICQQEFSKQAPYKKHMDNHAEEKPHRCPKCSASFNVPTNFTLHMATHNSGDPRCPECGKKFTRMASLKSHMLLHEKEENLFCTECEDVFSTKTQLDAHLKLHGEKWTTEEARKCKLCNKQFRQPALYRLHIREHYRLQTKVVKQTKRGVKHKTVYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACELCNARFSQKGNLNAHITRVHNVPEGEPIYRCNYCSCVFKKLGSLNGHMKRMHTGVNEDSATVRISESADTMESDIRATVNNVITQLASLESNTDENEKPENFGETGLLANVPTKKDILQQALKNSGLPSRNKSLCDDPSEAKKLDARTNFVTLLDRASDNGTRKYLTIKQRCVGNIRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHTGTKRYACGTCDKTFTCHSSLVIHTRSHGNSDECFSISIGNGNDNDNGAGHDHGHGHDHNNDNDNGNADIDATVNVIARSSNRQKIKSKMSPKTESLASQVILPEPLVISDSGNKICVVQIPSKKRVYDAAIDPARPHKCWVCEAAFRKISHLKQHHRRHTGERPYRCSKCDRRFTSNSVLKSHLHTHEDSRPYGCSICTAKFSTQSSMKRHLVTHSNKRPFMCPYCQKTFKTYVNCRKHMKIHKHELVQRQLEQQKLVSQEQTTNKLNAKESIEQETTSELSCCSPSSFPSGNVNDVPLDVSVNTDTDTGTVVATTSTFSDDPLPSVNLSFQERMGSTFPHTFPHQFQSVIEAKEKIRPLLSTNFATSTSINQNMTEITVTNLENPQMLHIDESGSVTLPVYSTDQALTPESIQEIEETLNQQLFNIEMNLGLGSDHSKHSCDTNELQNAKLQHQQPALNVIYTSNNNSNNGNNAEQSEEQVFASQLDSFEIDHITLQPDAEMTLDNIGLETNNSASMASILPQSVKGELSNQLAISAVSPENLTDGHQASGYMQTVLLISEQNLTVKGNASDQLKMHETEKNADGVVNDPTFLTEQFRRTSKVSSKSQKVSLSFESSLCPNDEINLNQSQQGESLLQCHMCSQQGFTTTKLKEHLKIHRGKKEYECTECSSRFYTNGGLNRHSKTHTNKQHWKSSSSCEKYLGDRTQSRSHSKVHESFSWNEKDVSILSQIPATVDNESSLNDVTIDSDSTVSERVLLDTVAEREVMDRVQHVATENKERKEYTNKCKYCPKTFRKPSDLVRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFKCSICDSRFRTSGHRKVHLLKHAREHKGNFKRKQKHLKVAAIAEVAMATDIEKSVDADRQEVCSYVEEPESQQQQQEQQDNHQHYEQTSQTTEAEYSTLQAINVETTASCLTDQITFESEGSVPNNSILSVSDGNQLVANLHFLLANGLVTIQTAEPLLTQPASTGDTLHQQSTVVADSVCASMINITPEIGTNQSIAAKETIHAENALKAQLSSPYQLQSDNCLLTSVAAPSQIEQFAKVPTVEKCLPTLEKPSAKGTPSKKECDVCGKTFTKPYQVERHKRIHTGERPYKCDLCVKSFAQKSTLQMHQKHHTGDRPHPCPRCEYSFTQKGNLRTHMSRAHRLDTVDSRKTKHNQQPLQRKSPERNLTEVKSLNLDDMSFIEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763369;
90% Identity: iTF_00862032;
80% Identity: -