Basic Information

Insect: Lasioglossum marginatum
Gene Symbol: ZNF236
Assembly: GCA_028455795.1
Location: CM052243.1:6037395-6045589[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.011 1 10.2 0.7 2 23 165 186 164 186 0.96

2 23 0.0001 0.0099 16.5 1.1 1 23 192 214 192 214 0.98

3 23 1.8e-06 0.00017 22.0 0.7 2 23 220 241 220 241 0.97

4 23 0.0051 0.48 11.2 0.4 3 23 249 269 247 269 0.96

5 23 8.9e-05 0.0085 16.7 1.1 2 23 280 301 280 301 0.98

6 23 7.5e-07 7.1e-05 23.3 1.1 1 23 322 344 322 344 0.99

7 23 5.9e-06 0.00056 20.4 0.7 1 20 350 369 350 372 0.95

8 23 4.8e-05 0.0045 17.6 0.5 1 23 378 401 378 401 0.94

9 23 0.00032 0.031 15.0 3.6 1 23 410 433 410 433 0.98

10 23 1.9e-06 0.00018 22.0 2.1 1 23 562 584 562 584 0.98

11 23 0.00032 0.03 15.0 3.3 1 23 590 612 590 612 0.99

12 23 0.0055 0.52 11.1 4.1 1 23 618 640 618 640 0.98

13 23 0.0041 0.39 11.5 6.0 1 23 716 738 716 738 0.98

14 23 4.7e-05 0.0045 17.6 4.8 1 23 744 766 744 766 0.99

15 23 0.00021 0.02 15.5 0.8 3 23 774 794 772 794 0.97

16 23 0.00041 0.038 14.6 7.6 1 23 800 822 800 822 0.98

17 23 0.19 18 6.2 1.9 2 23 1215 1236 1214 1236 0.96

18 23 0.00059 0.056 14.1 1.2 1 23 1242 1264 1242 1264 0.98

19 23 1.8e-07 1.7e-05 25.2 1.4 2 23 1364 1385 1363 1385 0.98

20 23 0.00073 0.07 13.8 3.5 1 23 1391 1413 1391 1413 0.99

21 23 0.00025 0.023 15.3 1.9 1 23 1419 1441 1419 1441 0.98

22 23 0.0014 0.14 12.9 3.6 1 23 1447 1469 1447 1469 0.98

23 23 3.7e-06 0.00035 21.1 1.5 1 23 1728 1751 1728 1751 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.011	1	10.2	0.7	2	23	165	186	164	186	0.96
2	23	0.0001	0.0099	16.5	1.1	1	23	192	214	192	214	0.98
3	23	1.8e-06	0.00017	22.0	0.7	2	23	220	241	220	241	0.97
4	23	0.0051	0.48	11.2	0.4	3	23	249	269	247	269	0.96
5	23	8.9e-05	0.0085	16.7	1.1	2	23	280	301	280	301	0.98
6	23	7.5e-07	7.1e-05	23.3	1.1	1	23	322	344	322	344	0.99
7	23	5.9e-06	0.00056	20.4	0.7	1	20	350	369	350	372	0.95
8	23	4.8e-05	0.0045	17.6	0.5	1	23	378	401	378	401	0.94
9	23	0.00032	0.031	15.0	3.6	1	23	410	433	410	433	0.98
10	23	1.9e-06	0.00018	22.0	2.1	1	23	562	584	562	584	0.98
11	23	0.00032	0.03	15.0	3.3	1	23	590	612	590	612	0.99
12	23	0.0055	0.52	11.1	4.1	1	23	618	640	618	640	0.98
13	23	0.0041	0.39	11.5	6.0	1	23	716	738	716	738	0.98
14	23	4.7e-05	0.0045	17.6	4.8	1	23	744	766	744	766	0.99
15	23	0.00021	0.02	15.5	0.8	3	23	774	794	772	794	0.97
16	23	0.00041	0.038	14.6	7.6	1	23	800	822	800	822	0.98
17	23	0.19	18	6.2	1.9	2	23	1215	1236	1214	1236	0.96
18	23	0.00059	0.056	14.1	1.2	1	23	1242	1264	1242	1264	0.98
19	23	1.8e-07	1.7e-05	25.2	1.4	2	23	1364	1385	1363	1385	0.98
20	23	0.00073	0.07	13.8	3.5	1	23	1391	1413	1391	1413	0.99
21	23	0.00025	0.023	15.3	1.9	1	23	1419	1441	1419	1441	0.98
22	23	0.0014	0.14	12.9	3.6	1	23	1447	1469	1447	1469	0.98
23	23	3.7e-06	0.00035	21.1	1.5	1	23	1728	1751	1728	1751	0.96

Sequence Information

Coding Sequence: ATGTTGACACGACACGCTATAATCACAGAATCTAACCCGGTCGCGGCAGTGCCAATAAATATTGTTGCTACCGAAGATGGTAGAACGCTACTAGCAGTGACAGAAGACAAAGACGGTCTATTGGAAGTTATCGCGACTCCGGTTACTCTTATTGGTCACAACGGCACAGCTGGGTCGTTGATGGATATCAAAAATGTAAATGGTTGTTTGATATTACATCCGTCTCCTCTTCAAATTGGTTTGGACTCCGGCGAAGGTTTGGATTTCGAACTGTCCAAGCAATGTGTCCAAGTCGATTCCGATGTTCCGAGTCAAATCAAAACCAAAGTAGGCTCGGATACAATTAGTGGTTTCCTTGACGACGCGTCTTCACAGAGAGAGAAAAGCAATGAAATTGTTAAAGTGAAGTCGACTGCCACGATCGCGAGAACGAATAGTCCTGGAAGGCCCAAAAAGAGTTCTGCCGTTGCATTGAAAGGCAAAGAGGGCTTGAGATGCGACATATGTCAGCAAGAATTTTTCAAGCAAGCTCCATATAAAAAGCACATGGACAATCATGCTGAAGAGAAGCCACATCGCTGCCCAAAATGTTCGGCATCTTTCAATGTACCGACAAACTTCACGCTTCACATGGCTACACATAATTCTGGTGACCCAAGGTGCCCTGAGTGTGGTAAAAAATTTACAAGAATGGCCAGCTTAAAATCTCATATGCTGTTACACGAGAAGGAAGAGAACTTGTTTTGTACAGAGTGCGAGGACGTTTTCTCGACCAAAACTCAATTGGATGCGCATTTGAAACTTCACGGAGAAAAGTGGACAACCGAAGAAGCAAGGAAATGTAAACTGTGTAATAAGCAGTTCAGGCAACCGGCGTTGTATCGACTACACATTCGTGAACATTACAGGTTGCAGACAAAGGTAGTAAAGCAGACAAAAAGAGGAGCCAAACATAAAACGGTATACAAATGTACGATATGCTTAAAATCCTTCCAAAAGCCAAGCCAATTAATGCGTCACATTCGAGTGCATACGGGTGAGAAGCCGTTCAAGTGTACGGTGTGCGGTCGTGCGTTCACGCAAAAGAGTTCTTTACAAATTCATACGTGGCAGCACAATGGTATACGACCCCATGCTTGCGAGCTCTGTAACGCCAGATTTAGTCAGAAAGGCAATTTAAATGCTCATATAACGAGAGTTCACAATGTGCCAGAGGGTGAACCTATATACAGATGCAACTATTGTTCTTGCGTTTTTAAGAAGCTTGGCAGCTTGAACGGTCACATGAAACGTATGCATACAGGAGTGAACGAGGACAGTGCTACCGTCAGAATCTCCGAATCAGCCGACACCATGGAATCGGACATACGAGCAACAGTAAACAACGTTATAACACAACTGGCGTCTTTAGAGTCGAATACGGACGAAGTTGAAAATGGAAAACCAGAAAACTTTGAGGAGACCGGGTTATTAGCAAATGTCCCTACCAAGAAAGATATTCTACAACAAGCACTGAAAAATAGCGGGTTACCTAGCAGAAACAAAAGTTTGTGCGATGATCCATCCGAAGCAAAAAAGTTGGATGCACGCACAAATTTCGTTACCTTGCTGGACCGAGCATCGGATAACGGTACCAGAAAATACCTGACGATAAAGCAACGGTGTGTAGGGAACATAAGATGGTACGCGTGTACGTTTTGCCATAAAGAGTTTAAGAAACCGTCAGACCTGATACGCCATTTACGAGTGCATACGCAGGAAAAACCATTCAAGTGCACGCACTGTTATCGTTCTTTCGCTTTAAAGTCTACCATGATAGCGCACGAGCGTACTCATACAGGTACCAAGAGATACGCCTGCGGTACTTGCGATAAAACGTTCACGTGCCACAGTAGCTTGGTTATTCATACAAGATCGCACGGGAACTCTGACGAATGTTTTAGCatatcgattgCCGCTCGTTGCAGTAATCGACAGAAAATTAACGCAAACAAGTCAAAGATGTCTCCGAAAACGGAGAGCCTTGCGTCTCAAGTGATACTGTCGGAGCCGTTGGTAATCAGTGACTCTGGAAACAAGATATGCGTGGTACAGATACCTTCGAAAAAGCGTGTTTACGATGCTGCAATCGATCCAGCTAGGCCGCATAAATGTTGGGTGTGCGAAGCGGCATTTCGAAAAATCAGTCATTTGAAGCAACACCATCGACGACACACCGGAGAACGTCCTTATAGGTGTTCCAAATGCGACAGGAGATTCACGTCGAACAGCGTTTTGAAATCGCATTTGCACACGCACGAAGACTCCAGACCTTACGGGTGTTCCATTTGTACCGCAAAATTTTCAACGCAGAGTAGCATGAAAAGACATTTGGTTACTCACAGTAACAAACGACCGTTCATGTGTCCATATTGTCACAAGACGTTCAAGACTTACGTGAATTGCCGTAAACATATGAAAATACACAAACACGAGTTGGTGCAACGGCAACTGGAGCAACAAAAACTGGTATCGCAAGAACAGACTACGAATAAGTTGAATGCGAAGGAGAGCTCTAAACAAGAAACAACGTCCGAGCTATCTTGCTGCTCTCCGTCCAATTTTTCTTCCGGTAACGTTAACGATGTTCCACTCGACGTGTCTGCAAACACCGATACCGGCACTGGCACCGTTGTCGCAACAACTTCCACGTTTTCCGACAATCCGCTGTCTTCGGTCAACTTATCTTTCCAAGAACGAATGGATTCAACCTTTCCACATACTTTCCCTCATCAATTTCAAAGTGTGATCGAAGCGAAAGAGAAAATAAGGCCACTTTTATCAACGAACTTCGCCACTTCGACATCTATTAATCAGAATATGACTGAGATAACCGTGACAAATCTAGAAAATCCACAGATGTTGCACATCGATGAAAGCGGTTCAGTTACATTACCAGTTTATTCGACCGATCAAGCTCTAACACCGGAGAGCATACAAGAAATCGAAGAGACATTGAACCAGCAGCTTTTCAACATCGGAATGAACCTTGGTTTGGGAAGCGACCATTCAAAACATTCCTGTGATACCAGTGACTTGCAGAATGCAAAATTGCAGCATCAGCAACCTGCGTTAAATGTCATTTACACGAGTAACAACAATTCTAATAACAACACGGAACAGTCTGAAGAGCAAGTTTTCGCGTCGCAGCTAGATTCGTTCGAGATTGATCATATTACTTTGCAACCGGATGCTGAAATGACACTGGATAATATTGGCCTCGAAACGAATAATTCGGCGAGTATGGCAAGCATATTGCCGCAAAGTGTGAAAGGAGAGTTATCGAATCAACTTGCCATTTCGGCTGTTTCGCCTGAGAATTTGGCCGACGGTCACCAAGCAAGTGGGTACATGCAAACCGTGTTGCTAATTTCCGAGCAAAATCTTACAGGAAAAGGAAATGCGAGCGATCAATTGAAAATGCGTGAGACTGAAAAGAATGCGGATGGAGTCGTCAACGATCCAACGTTCTTAACGGAACAGTTTCGGAGGACGTCCAAGGTTTCGTCAAAGAGCCAGGAAGTATCTTTGTCGTTCGAGTCGTCTCTTTGTCAAAACGATGAGGTCAACCCAAATCAATCGCAACAGGGGGAGTCTTTGTTGCAGTGCCATATGTGTAGCCAGCAAGGATTTACGGCAACGAAGTTGAAGGAGCACTTGAAGATCCATCGCGGTAAGAAGGAATATCAGTGTACGGAATGCTCTTCAAGATTTTACACGAACGGTGGATTAAACAGACACTCGAAAATACATACGAATAAACAACACTGGAAGAGTAGTTCGTCGTGCGAAAAATATCTCGGTGATAGAACGCAATCGCGATCGCACAGCAAGGTTCATGAAAGCTTCCCGTGGAACGAGAAGGATGTTTCAATTTTGTCGCAAATGCCAGCGACGGTAGATAACGAATCTTCGTTGAACGACGTCGTCATAGATTCCGATTCAACCGTGTCCGAAAGAGTTCTGTTGGACACAGTTGCGGAACGAGAGGTGATGGATCGAGTACAGCACGTAGCAACGGAGAAAAAGGAACGAAAGGAGTACACGAATAAATGTAAATATTGTCCGAAAACGTTTCGTAAACCAAGCGATCTCGTTAGACACGTCCGTACGCACACGGGGGAACGTCCATACAAGTGCGACTATTGCAGCAAAAGTTTCGCTGTAAAGTGCACGTTGGATTCTCACACCAAAGTTCATACCGGCAAAAAGACGTTCCGTTGTCACGTGTGTAGCAGTTTGTTCGCGACGAAGGGCAGCTTGAAAGTACATATGCGTTTGCATACAGGTTCGAAACCGTTCAAATGTTCCATCTGCGATTCGAGATTCCGAACCTCGGGGCATAGGAAAGTACATTTGTTGAAGCACGCCCGAGAACACAAAGGTAATTTCAAGAGGAAACAAAAACATTTGAAAGTTGCTGCCATAGCAGAAGTCGCTATGGCGACAGATATTGAAAAATCTGGCGATGATGGTCGACAAAAGATGTGCAGCTACGGACAAGAACAAGAATCGCAACAGCAGCAGCAACAGCAAGAACAGCAGCATGATCACCAGCACTATGAGCAAACGTCGCAAACAACAGAGGCAGAATATTCGAATTTGCAAGCAATTAACGTCGAAACAACTGCTTCGTGTTTAACCGATCAAATTACATTCGAATCGGAGGGATCCGTTCCAAATAATAATTCGATACTGTCCGTAAACGATGGTAACCAATTGGTGGCCAACTTACATTTTCTTCTGGCGAACGGTCTCGTTACTATACAGACCGCAGAATCGTTATTAACGCTGCCGGCATCGACTGGCAATACACTGTATCAACAATCGACTGTTGTCGCCGATTCCGTCTGCGCAAATTTGATCAATATTACCCCTGAGATTGGTACCAACCAAAGTATTGCTGCTAAAGAAACGATTCACGCGGAGAACGCATTGAAAGCGCAACTATCGTCTCCGTATCAATTGCAGTCAAACAACTGTCTTTTAACCAGCGTTGCAGCGCCATCGCGGATAGAACAATTCGCAAAGGTTCCGACCGTTGAGAAATGTTTGCCGACACTAGAGAAACCCTCTACGAAAGGAACTCCGTCGAAGAAAgagtgcgacatgcatcaaaaGCACCATACAGGCGATCGACCACATCCTTGTCCACGCTGCGAATATTCTTTCACACAAAAAGGCAATCTTCGGACGCACATGAGCCGCGCTCATCGGCTGGATACTGTCGACTCGAAAAAAACGAAACATAATCAGCAGTCGTTGCAACGCAAGTCTCCAGAGAGAAATTTGACCGAGGTTAAAAGTCTGAATTTAGATGACATGTCGTTCATTGAATTTCTTAAATAA
Protein Sequence: MLTRHAIITESNPVAAVPINIVATEDGRTLLAVTEDKDGLLEVIATPVTLIGHNGTAGSLMDIKNVNGCLILHPSPLQIGLDSGEGLDFELSKQCVQVDSDVPSQIKTKVGSDTISGFLDDASSQREKSNEIVKVKSTATIARTNSPGRPKKSSAVALKGKEGLRCDICQQEFFKQAPYKKHMDNHAEEKPHRCPKCSASFNVPTNFTLHMATHNSGDPRCPECGKKFTRMASLKSHMLLHEKEENLFCTECEDVFSTKTQLDAHLKLHGEKWTTEEARKCKLCNKQFRQPALYRLHIREHYRLQTKVVKQTKRGAKHKTVYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACELCNARFSQKGNLNAHITRVHNVPEGEPIYRCNYCSCVFKKLGSLNGHMKRMHTGVNEDSATVRISESADTMESDIRATVNNVITQLASLESNTDEVENGKPENFEETGLLANVPTKKDILQQALKNSGLPSRNKSLCDDPSEAKKLDARTNFVTLLDRASDNGTRKYLTIKQRCVGNIRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHTGTKRYACGTCDKTFTCHSSLVIHTRSHGNSDECFSISIAARCSNRQKINANKSKMSPKTESLASQVILSEPLVISDSGNKICVVQIPSKKRVYDAAIDPARPHKCWVCEAAFRKISHLKQHHRRHTGERPYRCSKCDRRFTSNSVLKSHLHTHEDSRPYGCSICTAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELVQRQLEQQKLVSQEQTTNKLNAKESSKQETTSELSCCSPSNFSSGNVNDVPLDVSANTDTGTGTVVATTSTFSDNPLSSVNLSFQERMDSTFPHTFPHQFQSVIEAKEKIRPLLSTNFATSTSINQNMTEITVTNLENPQMLHIDESGSVTLPVYSTDQALTPESIQEIEETLNQQLFNIGMNLGLGSDHSKHSCDTSDLQNAKLQHQQPALNVIYTSNNNSNNNTEQSEEQVFASQLDSFEIDHITLQPDAEMTLDNIGLETNNSASMASILPQSVKGELSNQLAISAVSPENLADGHQASGYMQTVLLISEQNLTGKGNASDQLKMRETEKNADGVVNDPTFLTEQFRRTSKVSSKSQEVSLSFESSLCQNDEVNPNQSQQGESLLQCHMCSQQGFTATKLKEHLKIHRGKKEYQCTECSSRFYTNGGLNRHSKIHTNKQHWKSSSSCEKYLGDRTQSRSHSKVHESFPWNEKDVSILSQMPATVDNESSLNDVVIDSDSTVSERVLLDTVAEREVMDRVQHVATEKKERKEYTNKCKYCPKTFRKPSDLVRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFKCSICDSRFRTSGHRKVHLLKHAREHKGNFKRKQKHLKVAAIAEVAMATDIEKSGDDGRQKMCSYGQEQESQQQQQQQEQQHDHQHYEQTSQTTEAEYSNLQAINVETTASCLTDQITFESEGSVPNNNSILSVNDGNQLVANLHFLLANGLVTIQTAESLLTLPASTGNTLYQQSTVVADSVCANLINITPEIGTNQSIAAKETIHAENALKAQLSSPYQLQSNNCLLTSVAAPSRIEQFAKVPTVEKCLPTLEKPSTKGTPSKKECDMHQKHHTGDRPHPCPRCEYSFTQKGNLRTHMSRAHRLDTVDSKKTKHNQQSLQRKSPERNLTEVKSLNLDDMSFIEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763369;
90% Identity: iTF_00862032;
80% Identity: -