Basic Information

Insect: Lasioglossum albipes
Gene Symbol: ZNF236
Assembly: GCA_000346575.1
Location: KB641456.1:961701-970397[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0014 0.12 13.1 0.6 2 23 165 186 164 186 0.96

2 25 0.00012 0.0098 16.4 1.1 1 23 192 214 192 214 0.98

3 25 2.1e-06 0.00017 22.0 0.7 2 23 220 241 220 241 0.97

4 25 0.0059 0.48 11.1 0.4 3 23 249 269 247 269 0.96

5 25 0.0001 0.0084 16.7 1.1 2 23 280 301 280 301 0.98

6 25 8.7e-07 7e-05 23.2 1.1 1 23 322 344 322 344 0.99

7 25 6.9e-06 0.00055 20.4 0.7 1 20 350 369 350 372 0.95

8 25 5.6e-05 0.0045 17.5 0.5 1 23 378 401 378 401 0.94

9 25 0.00038 0.031 14.9 3.6 1 23 410 433 410 433 0.98

10 25 2.2e-06 0.00018 21.9 2.1 1 23 546 568 546 568 0.98

11 25 0.00037 0.03 14.9 3.3 1 23 574 596 574 596 0.99

12 25 0.0064 0.51 11.0 4.1 1 23 602 624 602 624 0.98

13 25 0.0048 0.39 11.4 6.0 1 23 738 760 738 760 0.98

14 25 5.5e-05 0.0044 17.5 4.8 1 23 766 788 766 788 0.99

15 25 0.00025 0.02 15.5 0.8 3 23 796 816 794 816 0.97

16 25 0.0002 0.016 15.8 5.4 1 23 822 844 822 844 0.98

17 25 1.1 88 4.0 2.8 2 23 1237 1258 1236 1258 0.96

18 25 0.00055 0.044 14.4 1.4 1 23 1264 1286 1264 1286 0.98

19 25 2.1e-07 1.7e-05 25.2 1.4 2 23 1386 1407 1385 1407 0.98

20 25 0.00086 0.069 13.8 3.5 1 23 1413 1435 1413 1435 0.99

21 25 0.00029 0.023 15.3 1.9 1 23 1441 1463 1441 1463 0.98

22 25 0.0017 0.14 12.9 3.6 1 23 1469 1491 1469 1491 0.98

23 25 5.8e-06 0.00047 20.6 0.6 2 23 1733 1754 1732 1754 0.97

24 25 3.7e-05 0.0029 18.1 3.6 1 23 1760 1782 1760 1782 0.98

25 25 4.3e-06 0.00034 21.0 1.5 1 23 1788 1811 1788 1811 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0014	0.12	13.1	0.6	2	23	165	186	164	186	0.96
2	25	0.00012	0.0098	16.4	1.1	1	23	192	214	192	214	0.98
3	25	2.1e-06	0.00017	22.0	0.7	2	23	220	241	220	241	0.97
4	25	0.0059	0.48	11.1	0.4	3	23	249	269	247	269	0.96
5	25	0.0001	0.0084	16.7	1.1	2	23	280	301	280	301	0.98
6	25	8.7e-07	7e-05	23.2	1.1	1	23	322	344	322	344	0.99
7	25	6.9e-06	0.00055	20.4	0.7	1	20	350	369	350	372	0.95
8	25	5.6e-05	0.0045	17.5	0.5	1	23	378	401	378	401	0.94
9	25	0.00038	0.031	14.9	3.6	1	23	410	433	410	433	0.98
10	25	2.2e-06	0.00018	21.9	2.1	1	23	546	568	546	568	0.98
11	25	0.00037	0.03	14.9	3.3	1	23	574	596	574	596	0.99
12	25	0.0064	0.51	11.0	4.1	1	23	602	624	602	624	0.98
13	25	0.0048	0.39	11.4	6.0	1	23	738	760	738	760	0.98
14	25	5.5e-05	0.0044	17.5	4.8	1	23	766	788	766	788	0.99
15	25	0.00025	0.02	15.5	0.8	3	23	796	816	794	816	0.97
16	25	0.0002	0.016	15.8	5.4	1	23	822	844	822	844	0.98
17	25	1.1	88	4.0	2.8	2	23	1237	1258	1236	1258	0.96
18	25	0.00055	0.044	14.4	1.4	1	23	1264	1286	1264	1286	0.98
19	25	2.1e-07	1.7e-05	25.2	1.4	2	23	1386	1407	1385	1407	0.98
20	25	0.00086	0.069	13.8	3.5	1	23	1413	1435	1413	1435	0.99
21	25	0.00029	0.023	15.3	1.9	1	23	1441	1463	1441	1463	0.98
22	25	0.0017	0.14	12.9	3.6	1	23	1469	1491	1469	1491	0.98
23	25	5.8e-06	0.00047	20.6	0.6	2	23	1733	1754	1732	1754	0.97
24	25	3.7e-05	0.0029	18.1	3.6	1	23	1760	1782	1760	1782	0.98
25	25	4.3e-06	0.00034	21.0	1.5	1	23	1788	1811	1788	1811	0.96

Sequence Information

Coding Sequence: ATGTTGACACGACACGCTATAATCACAGAATCTAACCCGGGCGCGACAGTGCCAATAAATATTGTTGCTACCGAAGATGGTAGAACGCTACTAGCAGTGACAGAAGACAAAGACGGTCTATTGGAAGTTATCGCGACTCCGGTCACTCTTATTGGTCATAATGGCACAGCCGGGTCGTTGATGGATATCAAGAATGTAAATGGTTGTTTGATATTACATCCGTCTCCTCTTCAAATTGGTTTGGACTCCGGCGAAGGTTTGGATCTAGAACTGTCCAAGCAATGTGTCCGAGTCGATTCTGATGATCCGAGTCAAATCAAAACCAAAGTAGGCTCGGATGCAATTAGTGGTTTTCTTGACGACGAGTCTTCGGAGAGAGAGAAGAGCAATGAAATTGTTAAAGGGAAGTCGACTGCCATGATCGCGAGAACGAATAGTCTTGGAAGACCCAGAAAGAGCTCTGCCATTGCGTCGAAAGGTAAAGAGGGCTTGAGGTGCGACATATGTCAGCAAGAATTTTCCAAGCAAGCTCCATATAAAAAGCACATGGACAATCATGCGGAGGAGAAGCCGCATCGCTGCCCAAAATGTTCGGCATCTTTCAATGTACCGACAAACTTCACGCTTCACATGGCTACACATAATTCTGGCGACCCGAGGTGCCCCGAGTGTGGTAAAAAATTCACAAGAATGGCCAGCTTAAAATCTCATATGCTGTTACACGAGAAGGAAGAGAACTTGTTTTGTACGGAGTGCGAAGACGTTTTCTCGACCAAAACTCAATTGGATGCGCATTTGAAACTTCATGGAGAAAAGTGGACGACCGAAGAAGCAAGGAAATGTAAACTGTGTAATAAGCAGTTCAGGCAACCGGCGTTGTATCGACTACACATTCGCGAACATTACAGGTTGCAGACAAAGGTAGTAAAGCAGACGAAAAGAGGGGTCAAACATAAAACGGTATACAAATGTACGATATGCTTAAAATCCTTCCAAAAGCCAAGCCAATTAATGCGTCACATTCGAGTGCATACGGGTGAGAAGCCGTTCAAGTGTACGGTGTGCGGCCGAGCGTTCACGCAAAAGAGTTCTTTACAAATTCATACGTGGCAGCACAACGGCATACGACCCCATGCTTGCGAGCTCTGTAACGCCAGATTTAGTCAGAAAGGCAATTTAAATGCTCATATAACGAGAGTTCACAATGTGCCAGAGGGAGAGCCTATATACAGATGCAACTATTGTTCTTGCGTTTTCAAGAAGCTCGGCAGCTTGAACGGTCACATGAAACGTATGCATACAGGAGTGAACGAGGACAGTGCTACCGTCAGAATCTCCGAATCAGCCGACACCATGGAATCGGACATACGAGCAACAGTTAATAACGTTATAACCCAACTGGCATCTTTAGAGTCGAACACGGACGAAAATGAAAAACCAGAAAACTTCAGGGAGACCGGGTTATTAGCAAATGTCCCTACCAAGAAAGATATTCTACAACAAGCACTAAAAAATAGCGGGTTACCTAGCAGAAACAAGAGTTTGTGCGACGATCCATCCGAAGCAAAAAAGTTGGATGCACGCACAAATTTCGTTACCTTGTTGGACCGAGCATCGGATAACGGTACCAGATGGTACGCGTGTACGTTTTGCCATAAAGAGTTCAAGAAACCATCAGACCTGATACGCCATTTACGGGTGCATACGCAGGAAAAACCATTCAAGTGCACGCACTGTTATCGTTCTTTCGCTTTAAAGTCTACCATGATAGCGCACGAGCGTACTCATACAGGTTCCAAGAGATATGCCTGCGGTACTTGCGATAAAACGTTCACGTGCCACAGTAGCTTGGTTATTCATACAAGATCGCACGGGAACTCTGACGAATGTTTTAGCATATCGATTGGTAACGGTAACGATAATGATAACGGTGCTGGCCATGATCACGGTCACGGCCACGATCACGATCGCGATCATAATAATGATAACGATAACGGTAATGCTGATATTGACGCAACCGTTAACGTAATCGCTCGTTCCAGTAATCGACAGAAAATCAAGTCGAAGATGTCTCCGAAAACGGAGAGCCTTGCGTCTCAAGTGATACTGCCGGAGCCGTTGGTAATCAGTGACTCCGGGAACAAGATATGCGTGGTACAGATACCTTCGAAAAAGCGTGTTTACGATGCCGCAATCGATCCAGCTAGGCCGCATAAATGTTGGGTGTGCGAAGCGGCATTTCGAAAAATCAGTCATTTGAAGCAACACCATCGACGACACACCGGAGAACGTCCTTACAGGTGTTCCAAATGCGACAGGAGATTCACGTCGAACAGTGTTTTGAAATCGCATTTGCACACACACGAAGACTCCAGACCTTACGGGTGTTCCATTTGCACCGCAAAGTTTTCCACGCAGAGTAGCATGAAAAGACATTTAGTTACTCACAGTAACAAACGACCGTTCATGTGTCCGTATTGTCAAAAGACGTTCAAGACTTACGTGAATTGCCGTAAACATATGAAAATACACAAACACGAGTTGGTGCAACGGCAACTGGAGCAACAAAAACTGGTGTCGCAGGAACAGACTACGAATAAATTGAATGCGAAGGAGAGCACTGAACAAGAATCAACGTCAGAGCTATCTTGCTGCTCTCCGTCCAGTTTTCCTTCCGGTAACGTTAACGATGTTCCACTCGACGTGTCCGCAAATACCGACACCGGCACCGTAGTCGCAACAACTTCCACGTTTTCCGACAATTCGCTGCCCTCGGTCAACTTATCTTTCCAAGAACGAATGGGATCAACCTTTCCGCATACTTTCCCGCATCAATTTCAAAATGTGATCGAAGCGAAAGAGAAAATAAGGCCACTTTTATCAACGAACTTCGCCACTTCGACATCTATTAATCAAAATATGACTGAGATAACCGTGACAAATCTAGAAAATCCACAGATGTTGCACATCGATGAAAGCGGTTCGGTTACGTTACCAGTTTATTCGACCGATCAAGCTCTAACACCGGAGAGCATACAAGAAATCGAAGAGACATTGAACCAGCAGCTTTTCAACATCGAAATGAACCTTGGTTTGGGAAGCGACCATTCGAAACATTCCTGTGACACCAACGAATTGCAGAATGCAAAATTGCAGCATCAGCAACCTGCGTTAAATGTCATCTACACGAGCAACAACAATTCTAATAACGGTAACAACGCGGAACAGTCTGAAGAGCAAGTGTTCGCGTCGCAGCTAGATTCGTTCGAGATTGATCATATTACTTTGCAACCGGATGCTGAAATGACACTGGACAATATTGGCCTCGAAACGAATAATTCGACGAGTATGGCCAGCATATTGCCCCAAAGCGTGAAAGGAGAGTTATCGAATCAACTTGCCATTTCGGCTGTTTCGCCTGAGAATCTGACCGACGGTCACCAAGCAAGTGGGTACATGCAAACTGTGTTGCTAATTTCCGAGCAGAATCTTACGGTAAAAGGAAATGCGAGCGATCAATTGAAAATGCACGAGACTGAAAAGAATGCGGATGGAGTCGTCAACGATCCAACGTTCTTAACGGAACAGTTTCGGAGGACGTCCAAGGTTTCGTCAAAGAGCCAGAAAGTATCTTTGTCGTTCGAGTCGTCTCTTTGTCCAAACGATGAGATCAACCCAAATCAATCGCAACAGGGGGAGTCTTTGTTGCAGTGCCATATGTGCAGCCAGCAAGGATTTACGACAACCAAGTTGAAGGAGCACTTGAAGATCCATCGCGGTAAGAAGGAATATGAGTGCACGGAATGCTCTTCAAGATTTTACACGAACGGTGGATTAAACAGACACTCGAAAACACATACGAATAAACAACACTGGAAGAGTAGTTCGTCGTGCGAAAAATATCTCGGCGATAGAACGCAATCGCGATCACATAGCAAGGTTCACGAGAGCTTCTCGTGGAACGAGAAGGATGTTTCAATTTTGTCGCAAATACCGGCAACGGTAGATAACGAATCGTCGTTGAACGACGTCACAATAGATTCCGATTCAACCGTGTCCGAAAGAGTTCTGTTGGACACGGTTGCGGAACGAGAGGTGATGGATCGAGTACAGCACGTAGCAACGGAGAACAAGGAACGAAAGGAGTACACGAATAAATGTAAATATTGCCCGAAAACGTTTCGTAAACCAAGCGATCTCGTTAGACACGTCCGTACGCACACGGGGGAACGTCCGTACAAGTGCGACTATTGCAGCAAAAGTTTCGCTGTGAAGTGCACGTTGGATTCTCACACTAAAGTTCACACCGGCAAAAAGACGTTCCGTTGTCACGTGTGTAGCAGTTTGTTCGCGACGAAGGGCAGCTTGAAAGTACACATGCGTTTGCATACAGGTTCGAAACCGTTCAAATGTTCCATCTGCGATTCGAGATTCCGAACCTCGGGGCACAGGAAAGTACATTTGTTGAAGCACGCCCGAGAACACAAAGGTAATTTCAAGAGGAAACAAAAACATTTGAAAGTTGCTGCTATAGCAGAAGTCGCTATGGCGACGGACATTGAAAAATCCGTCGATGCTGATCGACAAGAGGTGTGCAGCTACGTAGAAGAACAAGAATCGCAACAGCAACAGCAAGAACAGCAGGATAATCACCAGCACTATGAGCAAACGTCGCAAACGACAGAGGCAGAATATTCGAATTTGCAAGCCATTAACGTCGAAACAACTGCCTCGTGTTTAACCGACCAAATCACATTCGAATCGGAGGGATCCGTTCCAAACAACTCGATACTGTCCGTGAGCGACGGTAACCAATTGGTGGCCAACTTACATTTCCTTCTGGCGAACGGTCTCGTTACTATACAGACTGCAGAACCGTTATTAACCCAGCCGGCATCGACCGGCGATACGCTGCACCAACAACCGACTGTTGTCGCCGATTCCGTCTGCGCATCGATGATCAATATTACCCCTGAGATCGGTACCAACCAAAGTATTGCTGCTAAAGAAACGATTCACGCGGAGAACGCATTGAAAGCGCAACTATCGTCTCCGTACCAATTGCAGTCGGACAACTGTCTTCTAACCAGCGTTGCAGCGCCATCGCAGATAGAACAGTTCGCAAAGGTTCCGACCGTTGAGAAGTGTTTGCCGACGCTGGAGAAACCCTCTGCCAAAGGAACTCCGTCGAAGAAAGAGTGCGACGTTTGTGGGAAAACGTTCACGAAACCGTATCAAGTCGAACGCCATAAACGAATTCACACGGGCGAACGACCGTACAAGTGCGATTTATGTGTCAAATCGTTCGCTCAAAAGTCCACGTTACAGATGCATCAAAAACACCATACAGGCGATCGACCACATCCCTGTCCACGCTGCGAATATTCTTTCACACAAAAAGGCAATCTTCGCACACACATGAGCCGCGCTCATCGGCTGGATACTGTCGACTCGAGAAAAACGAAACATAATCAACAGCCGTTGCAACGCAAGTCTCCGGAGAGAAATTTGACCGAGGTTAAAAGTCTGAATTTAGATGACATGTCGTTCATCGAATTTCTTAAATAA
Protein Sequence: MLTRHAIITESNPGATVPINIVATEDGRTLLAVTEDKDGLLEVIATPVTLIGHNGTAGSLMDIKNVNGCLILHPSPLQIGLDSGEGLDLELSKQCVRVDSDDPSQIKTKVGSDAISGFLDDESSEREKSNEIVKGKSTAMIARTNSLGRPRKSSAIASKGKEGLRCDICQQEFSKQAPYKKHMDNHAEEKPHRCPKCSASFNVPTNFTLHMATHNSGDPRCPECGKKFTRMASLKSHMLLHEKEENLFCTECEDVFSTKTQLDAHLKLHGEKWTTEEARKCKLCNKQFRQPALYRLHIREHYRLQTKVVKQTKRGVKHKTVYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACELCNARFSQKGNLNAHITRVHNVPEGEPIYRCNYCSCVFKKLGSLNGHMKRMHTGVNEDSATVRISESADTMESDIRATVNNVITQLASLESNTDENEKPENFRETGLLANVPTKKDILQQALKNSGLPSRNKSLCDDPSEAKKLDARTNFVTLLDRASDNGTRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHTGSKRYACGTCDKTFTCHSSLVIHTRSHGNSDECFSISIGNGNDNDNGAGHDHGHGHDHDRDHNNDNDNGNADIDATVNVIARSSNRQKIKSKMSPKTESLASQVILPEPLVISDSGNKICVVQIPSKKRVYDAAIDPARPHKCWVCEAAFRKISHLKQHHRRHTGERPYRCSKCDRRFTSNSVLKSHLHTHEDSRPYGCSICTAKFSTQSSMKRHLVTHSNKRPFMCPYCQKTFKTYVNCRKHMKIHKHELVQRQLEQQKLVSQEQTTNKLNAKESTEQESTSELSCCSPSSFPSGNVNDVPLDVSANTDTGTVVATTSTFSDNSLPSVNLSFQERMGSTFPHTFPHQFQNVIEAKEKIRPLLSTNFATSTSINQNMTEITVTNLENPQMLHIDESGSVTLPVYSTDQALTPESIQEIEETLNQQLFNIEMNLGLGSDHSKHSCDTNELQNAKLQHQQPALNVIYTSNNNSNNGNNAEQSEEQVFASQLDSFEIDHITLQPDAEMTLDNIGLETNNSTSMASILPQSVKGELSNQLAISAVSPENLTDGHQASGYMQTVLLISEQNLTVKGNASDQLKMHETEKNADGVVNDPTFLTEQFRRTSKVSSKSQKVSLSFESSLCPNDEINPNQSQQGESLLQCHMCSQQGFTTTKLKEHLKIHRGKKEYECTECSSRFYTNGGLNRHSKTHTNKQHWKSSSSCEKYLGDRTQSRSHSKVHESFSWNEKDVSILSQIPATVDNESSLNDVTIDSDSTVSERVLLDTVAEREVMDRVQHVATENKERKEYTNKCKYCPKTFRKPSDLVRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFKCSICDSRFRTSGHRKVHLLKHAREHKGNFKRKQKHLKVAAIAEVAMATDIEKSVDADRQEVCSYVEEQESQQQQQEQQDNHQHYEQTSQTTEAEYSNLQAINVETTASCLTDQITFESEGSVPNNSILSVSDGNQLVANLHFLLANGLVTIQTAEPLLTQPASTGDTLHQQPTVVADSVCASMINITPEIGTNQSIAAKETIHAENALKAQLSSPYQLQSDNCLLTSVAAPSQIEQFAKVPTVEKCLPTLEKPSAKGTPSKKECDVCGKTFTKPYQVERHKRIHTGERPYKCDLCVKSFAQKSTLQMHQKHHTGDRPHPCPRCEYSFTQKGNLRTHMSRAHRLDTVDSRKTKHNQQPLQRKSPERNLTEVKSLNLDDMSFIEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763369;
90% Identity: iTF_00862032;
80% Identity: -