Basic Information

Insect: Lasioglossum zephyrum
Gene Symbol: ZNF236
Assembly: GCA_028455615.1
Location: CM052327.1:6418053-6425852[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0014 0.12 13.1 0.6 2 23 164 185 163 185 0.96

2 25 0.00012 0.01 16.4 1.1 1 23 191 213 191 213 0.98

3 25 2e-06 0.00018 22.0 0.7 2 23 219 240 219 240 0.97

4 25 0.0056 0.49 11.1 0.4 3 23 248 268 246 268 0.96

5 25 9.9e-05 0.0086 16.7 1.1 2 23 279 300 279 300 0.98

6 25 8.3e-07 7.2e-05 23.2 1.1 1 23 321 343 321 343 0.99

7 25 6.5e-06 0.00057 20.4 0.7 1 20 349 368 349 371 0.95

8 25 5.3e-05 0.0046 17.5 0.5 1 23 377 400 377 400 0.94

9 25 0.00036 0.031 14.9 3.6 1 23 409 432 409 432 0.98

10 25 2.1e-06 0.00018 21.9 2.1 1 23 561 583 561 583 0.98

11 25 0.00035 0.031 14.9 3.3 1 23 589 611 589 611 0.99

12 25 0.0061 0.53 11.0 4.1 1 23 617 639 617 639 0.98

13 25 0.0036 0.31 11.8 6.3 1 23 754 776 754 776 0.98

14 25 5.2e-05 0.0045 17.5 4.8 1 23 782 804 782 804 0.99

15 25 0.00023 0.02 15.5 0.8 3 23 812 832 810 832 0.97

16 25 9.9e-05 0.0086 16.7 5.4 1 23 838 860 838 860 0.98

17 25 0.21 19 6.2 1.9 2 23 1255 1276 1254 1276 0.96

18 25 0.00066 0.057 14.1 1.2 1 23 1282 1304 1282 1304 0.98

19 25 6e-08 5.3e-06 26.8 1.4 2 23 1401 1422 1400 1422 0.98

20 25 0.00081 0.071 13.8 3.5 1 23 1428 1450 1428 1450 0.99

21 25 0.00027 0.024 15.3 1.9 1 23 1456 1478 1456 1478 0.98

22 25 0.0016 0.14 12.9 3.6 1 23 1484 1506 1484 1506 0.98

23 25 5.5e-06 0.00048 20.6 0.6 2 23 1740 1761 1739 1761 0.97

24 25 3.5e-05 0.003 18.1 3.6 1 23 1767 1789 1767 1789 0.98

25 25 1e-06 8.7e-05 22.9 0.6 1 23 1795 1818 1795 1818 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0014	0.12	13.1	0.6	2	23	164	185	163	185	0.96
2	25	0.00012	0.01	16.4	1.1	1	23	191	213	191	213	0.98
3	25	2e-06	0.00018	22.0	0.7	2	23	219	240	219	240	0.97
4	25	0.0056	0.49	11.1	0.4	3	23	248	268	246	268	0.96
5	25	9.9e-05	0.0086	16.7	1.1	2	23	279	300	279	300	0.98
6	25	8.3e-07	7.2e-05	23.2	1.1	1	23	321	343	321	343	0.99
7	25	6.5e-06	0.00057	20.4	0.7	1	20	349	368	349	371	0.95
8	25	5.3e-05	0.0046	17.5	0.5	1	23	377	400	377	400	0.94
9	25	0.00036	0.031	14.9	3.6	1	23	409	432	409	432	0.98
10	25	2.1e-06	0.00018	21.9	2.1	1	23	561	583	561	583	0.98
11	25	0.00035	0.031	14.9	3.3	1	23	589	611	589	611	0.99
12	25	0.0061	0.53	11.0	4.1	1	23	617	639	617	639	0.98
13	25	0.0036	0.31	11.8	6.3	1	23	754	776	754	776	0.98
14	25	5.2e-05	0.0045	17.5	4.8	1	23	782	804	782	804	0.99
15	25	0.00023	0.02	15.5	0.8	3	23	812	832	810	832	0.97
16	25	9.9e-05	0.0086	16.7	5.4	1	23	838	860	838	860	0.98
17	25	0.21	19	6.2	1.9	2	23	1255	1276	1254	1276	0.96
18	25	0.00066	0.057	14.1	1.2	1	23	1282	1304	1282	1304	0.98
19	25	6e-08	5.3e-06	26.8	1.4	2	23	1401	1422	1400	1422	0.98
20	25	0.00081	0.071	13.8	3.5	1	23	1428	1450	1428	1450	0.99
21	25	0.00027	0.024	15.3	1.9	1	23	1456	1478	1456	1478	0.98
22	25	0.0016	0.14	12.9	3.6	1	23	1484	1506	1484	1506	0.98
23	25	5.5e-06	0.00048	20.6	0.6	2	23	1740	1761	1739	1761	0.97
24	25	3.5e-05	0.003	18.1	3.6	1	23	1767	1789	1767	1789	0.98
25	25	1e-06	8.7e-05	22.9	0.6	1	23	1795	1818	1795	1818	0.97

Sequence Information

Coding Sequence: ATGTTGACACGACAAGCTGTAATCACAGAATCCAACCCGGTCGCGGCAGTGCCAATAAATATCGTTGCAACCGAAGATGGTAGAACGTTACTAGCAGTGACAGAAGACAAAGATGGTCTATTGGAAGTCATTGCGACTCCGGTTACTCTCATCGGTCACAATGTCACAGCCGGGTCGTTGATGGATATCAAGAATGTAAACGGTTGTTTGATATTACATCCGTCTCCTCTTCAAATTGGTTTGGACTCCGGCGAAGGTTTGGATCTCGAACTGTCCAAGCAATGTGTTCGAGTCGATTCTGACGCTAGTCGAATCAAAACCAAAGTAGGCTTGGATACAATTACTGGTTTCCTTGAAGATGAGTCTTCGCAGAGAGAGAAGAGCAACGAAATTGTCAAGGGGAAGTCGACTGCCATGATCACGAGAACAAATAGTCCTGGAAGACCCAAAAAGAGCTCCGCCGTTGCATTGAAAGGCAAAGAGGGCTTGAGATGCGACATATGTCAGCAAGAATTTTCCAAGCAAGCTCCGTACAAAAAACACATGGACAATCATGCGGAAGAGAAGCCACATCGCTGCCCAAAATGTTCGGCATCATTCAATGTACCGACAAACTTCACGCTTCACATGGCTACACATAATTCCGGTGACCCGAGGTGCCCCGAGTGCGGTAAGAAATTTACGAGAATGGCCAGCTTAAAATCTCATATGCTGTTACACGAGAAGGAAGAGAACTTGTTTTGTACCGAGTGCGAAGACGTTTTCTCGACCAAGACTCAATTGGATGCGCATTTGAAACTTCACGGAGAAAAGTGGACAACCGAAGAAGCAAGGAAATGTAAGCTGTGTAATAAGCAGTTCAGGCAACCGGCGTTGTATCGACTACACATTCGTGAACATTACAGGTTGCAGACAAAGGTAGTAAAGCAAACAAAAAGAGGGGCTAAACATAAAACGGTATACAAATGTACGATATGCTTAAAATCCTTCCAAAAGCCAAGCCAATTAATGCGTCACATCCGAGTGCATACGGGTGAGAAGCCGTTCAAGTGTACGGTGTGCGGTCGTGCGTTCACGCAAAAGAGTTCTTTACAAATTCATACGTGGCAGCACAATGGTATACGACCCCATGCTTGCGAGCTCTGTAACGCCAGATTTAGTCAGAAAGGCAATTTAAATGCTCATATAACGAGAGTCCACAATGTGCCAGAGGGAGAGCCTATATACAGATGCAACTACTGTTCTTGCGTTTTCAAGAAGCTTGGCAGCTTGAACGGTCACATGAAACGTATGCATACAGGAGTGAACGAGGACAGTGCTACCGTTAGAATCTCCGATTCAGCTGACACCATCGAATCGGACATACGAGCGACGGTAAACAACGTTATAACGCAACTGGCGTCTTTAGAGTCGAATACGGACGAAATTGAAAATGGAAAACCAGAAAACTTTGAGGAGACCGGGTTATTGGCAAGTGTCCCTACCAAGAAAGATATTCTACAACAGGCACTGAAAAATAGCGGGTTACCTAGTAGAAACAAAAGTTCGTGCGACGATCTATCCGAAGCAAAAAAGTTGGATGCACGCACGAATTTCGTTACCTTGCTGGACCGGGCATCGGACAGCGGTACCAGAAAATACCTGACGATAAAGCAACGGTGTGTAGGGAACATAAGATGGTACGCGTGTACGTTTTGCCATAAAGAGTTCAAGAAACCATCGGACCTGATACGCCATTTACGAGTGCACACGCAAGAAAAACCATTCAAGTGCACGCACTGTTATCGTTCTTTCGCTTTAAAGTCCACCATGATAGCGCACGAGCGTACTCATACAGGTACCAAGAGATACGCCTGCGGTACTTGCGATAAAACGTTCACGTGCCACAGTAGCTTGGTTATTCATACAAGATCGCACGGGAACTCtgacgaatgttttagcatatcgattggtaacgaaaatgataacggtactggtcacgatcatggtcacggtcacgatcataataatgataacgataacaacaccgataacggtaatgccgatattgaCGCAACGGTTAACGTAGCCGCTCGTTGCAGTAATCGACAGAAAATTAACGCAAACAAGTCAAAGATGTCTCCGAAAACGGAGAGCCTCGCGTCTCAAGTGATACTGTCGGAGCCGTTGGTAATCAGTGACTCCGGAAACAACATATGCGTGGTACAGATACCTTCGAAAAAGCGTGTTTACGATGCTGCAATCGATCCAGCTAGGCCGCATAAATGTTGGGAATGCGAAGCGGCATTTCGAAAAATCAGTCATTTGAAGCAACACCATCGACGACACACCGGAGAACGTCCTTACAGGTGTTCCAAATGCGACAGGAGATTCACGTCGAACAGCGTTTTGAAATCGCATCTGCACACGCACGAGGACTCCAGACCTTACGGGTGTTCCATTTGTACCGCAAAATTTTCAACGCAGAGCAGCATGAAAAGACATTTGGTTACTCACAGCAATAAACGACCGTTCATGTGTCCGTATTGTAACAAGACGTTCAAGACTTACGTGAATTGCCGTAAACATATGAAAATACACAAACACGAGTTGGTGCAACGGCAACTGGAGCAAGAGAAACTGGCATCGCAAGAGCAGACTGCGAATAAGTTGAATGCGAAGGAGAGCTCTAAACAAGAAACAACGTCCGAGTTATCTTGCTGCTCTCCGTCCAATTTTGCTTCCGCTAACGTCAACGATGTTCCACTCGACGTGTCTGCAAACACGGACACCGATACTGGCACCGTTGTCGCGACAACTTCCACGTTTTCCGACAATCAGCTGTCTTCGGTCAACTTATCTTTCCAAGAACGAATGGGATCAACCTTTCCGCATGCTTTCCCGCATCAATTTCAAAGTGTGATCGAACCGAAAGAGAAAATAAGACCACTCTTATCAACGAACTTCGCCACCTCTGCATCTATTAATCAGAATATGACTGAGATAACCGTGACAAATCTAGAAAATCCACAGATGTTGCACATCGATGAAAGCGGTTCGGTTACGTTACCAGTTTATTCGACCGATCAAGCTCTAACACCGGAGAGCATACAAGAAATCGAGGAGACATTGAACCAGCAGATTTTCAATATCGAAATGAACCTTGGCTTGGGAAGCGATCATTCGAAACATTCCTTCGATACCAGCGAATTGCAGAATGCAAAATTGCAGCATCAACAACCAGCGTTAAATGTCATTTACACGAGTAACAACAATTCTAATAACGATAACAACACGGAACAGTCTGAAGAGCAAGTGTTCGCGTCGCAGCTGGATTCGTTCGAGATCGATCATATTACTTTGCAACCGGATGCTGAAATAACACTGGACAATATTGGCCTCGAAACGAATAATTCGACGAGTATGGCAAGCATATTACCGCAAAGCGTGAAAGGAGAGTTATCGAGTCAACTTGCCATTTCGGCCGTATCGCCTGAGAATTTGACCGACGGTCACCAAGCAAGTGGGTACATGCAAACCGTGTTGCTAATTTCCGAGCAGAATCTTACAGGAAAAGGAAACGCGAGCGATCAATTGAAAATGCGCGAGAGTGAAAAGAATGCGGATGGAGTCGTCAACGATCCAACGTTCTTAACGGAACAGTTTCGAAGGACGTCCAAGGTTTCGTCAAAGAGCCAGGAAGTATCTTTGACGTTCGAGTCGCCACTTTGTCGAAACGATGAGATCGATCCAAATCAATCGCAGCAGGGGGAGTCTCTGTTGCAGTGTCATATGTGTAGCCAGCAAGGATTTACGGCAACCAAGTTGAAGGAACACTTGAAGATCCATCGCGGTAAGAAGGAATATCAGTGTACGGAATGCTCTTCAAGATTTTACACGAACGGTGGATTAAACAGACACTCGAAAATACATACAAATAAACAACACTGGAAGAGTAGTTCGTGCGAAAAATATCTCGGTGATAGAACGCAATCGCATAGCAAGGTTCATGAAAGCTTCTCGTGGAACGAGAAGGATGTTTCGATTTTGTCGCAAATACCAGCAACGGTAGATAACGAATCGTCGTTGAACGAAGTCGCAATCGATTCCGATTCAACCGTGTCCGAAAGGGTTCTGTTGGACACGGTTGCGGAACGAGAGGTGATGGAACGAGTACAGCACGTAGCAACGGAGGAAAAGGAGCGAAAAGAGTACACGAATAAATGTAAATATTGTCCGAAAAcgtttcgtaaaccaagcgatctggttagacacatccgtacgcacacaggtgagcgtccatacaagtgcgactattgcagcaaaagtttcgctgtaaagtgcacgttggattctcacactaaagttcataccggcaaaaagacgttccgttgtcacgtgtgtagcagtttgttcgcgacgaagggcagcttgaaagtgcatatgcgtttgcatacagGTTCGAAACCGTTTAAATGTTCCATCTGCGATTCGAGATTCCGAACCTCGGGGCATAGGAAAGTGCACTTGTTGAAACACGCCCGAGAACACAAAGGTAATTTCAAGAGGAAGCAAAAACATTTGAAAGTTGCTGCCATAGCAGAAGTCGCTATGGCGACAGATATTGAAAAGTCTGGCGATGACGGTCGACAAAAGGTGTGCACCTACGAACAGGAACAAGAATCGCAACATCAAGAACAGCACTATGAGCAAACATCGCAAACAACGGAGGCAGAATATTCGAATTTGCAGGCAATCAACGTCGAAACAACTGCTTCGTGTTTGACCGACCAAATCACATTCGAGTCGGAGGGATCCGTTCCAAATAATTCGATACTGTCCGTAAACGATGGTAACCGATTGGTGGCCAACTTACATTTTCTTCTGACGAACGGTCTCGTTACCATACAGACCGCAGAATCGTTATTAACGCAGCCGGCATCGACTGACAATACACTGCATCCACAATCGACTGTTGTCGCCGATTCCGTCTGCGCATCGATGATCAATATTACCCCCGAGATCGGTACCAATCAAAGTATTGCTGTTAAAGAAACGATTCACGCGGAGAACGCATTGAAAGCGCAAATGTCTCCGTATCAATTGCAGTCAAACAACTGTCTTTTAACCAGCGTTGCAGCGCCATCGCGGATAGAACAGTTCACAAAGGTTCCTACCGTTGAGAAGTGTCTGCCGACACTGGAGAAACCCTCTACCAAAGGAACTCCGTCTAAGAAAGagtgcgacgtttgtgggaaaacgttcacgaagccgtatcaagttgaacgccataaacgaattcacacgggcgaacgaccgtacaagtgcgatttatgtgtaaaatcgttcgctcagaaatctacgctgcaaatgcatcaaaagcaccatacaggcgatcgaccatatccttgtccacgctgcgaatattctttcacgcaaaagggcaatcttcgcacgcacatgagcCGTGCTCATCGGATGGATACTGTCGACTCGAAAAAAACGAAACACAATCAGCAGTCGTTGCAACACAAGTCTCCGGAGAGAAATTTGACCGAGGTTAAAAGTCTGAACTTAGATGACATGTCGTTCATCGAATTTCTTAAATAA
Protein Sequence: MLTRQAVITESNPVAAVPINIVATEDGRTLLAVTEDKDGLLEVIATPVTLIGHNVTAGSLMDIKNVNGCLILHPSPLQIGLDSGEGLDLELSKQCVRVDSDASRIKTKVGLDTITGFLEDESSQREKSNEIVKGKSTAMITRTNSPGRPKKSSAVALKGKEGLRCDICQQEFSKQAPYKKHMDNHAEEKPHRCPKCSASFNVPTNFTLHMATHNSGDPRCPECGKKFTRMASLKSHMLLHEKEENLFCTECEDVFSTKTQLDAHLKLHGEKWTTEEARKCKLCNKQFRQPALYRLHIREHYRLQTKVVKQTKRGAKHKTVYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACELCNARFSQKGNLNAHITRVHNVPEGEPIYRCNYCSCVFKKLGSLNGHMKRMHTGVNEDSATVRISDSADTIESDIRATVNNVITQLASLESNTDEIENGKPENFEETGLLASVPTKKDILQQALKNSGLPSRNKSSCDDLSEAKKLDARTNFVTLLDRASDSGTRKYLTIKQRCVGNIRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHTGTKRYACGTCDKTFTCHSSLVIHTRSHGNSDECFSISIGNENDNGTGHDHGHGHDHNNDNDNNTDNGNADIDATVNVAARCSNRQKINANKSKMSPKTESLASQVILSEPLVISDSGNNICVVQIPSKKRVYDAAIDPARPHKCWECEAAFRKISHLKQHHRRHTGERPYRCSKCDRRFTSNSVLKSHLHTHEDSRPYGCSICTAKFSTQSSMKRHLVTHSNKRPFMCPYCNKTFKTYVNCRKHMKIHKHELVQRQLEQEKLASQEQTANKLNAKESSKQETTSELSCCSPSNFASANVNDVPLDVSANTDTDTGTVVATTSTFSDNQLSSVNLSFQERMGSTFPHAFPHQFQSVIEPKEKIRPLLSTNFATSASINQNMTEITVTNLENPQMLHIDESGSVTLPVYSTDQALTPESIQEIEETLNQQIFNIEMNLGLGSDHSKHSFDTSELQNAKLQHQQPALNVIYTSNNNSNNDNNTEQSEEQVFASQLDSFEIDHITLQPDAEITLDNIGLETNNSTSMASILPQSVKGELSSQLAISAVSPENLTDGHQASGYMQTVLLISEQNLTGKGNASDQLKMRESEKNADGVVNDPTFLTEQFRRTSKVSSKSQEVSLTFESPLCRNDEIDPNQSQQGESLLQCHMCSQQGFTATKLKEHLKIHRGKKEYQCTECSSRFYTNGGLNRHSKIHTNKQHWKSSSCEKYLGDRTQSHSKVHESFSWNEKDVSILSQIPATVDNESSLNEVAIDSDSTVSERVLLDTVAEREVMERVQHVATEEKERKEYTNKCKYCPKTFRKPSDLVRHIRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFKCSICDSRFRTSGHRKVHLLKHAREHKGNFKRKQKHLKVAAIAEVAMATDIEKSGDDGRQKVCTYEQEQESQHQEQHYEQTSQTTEAEYSNLQAINVETTASCLTDQITFESEGSVPNNSILSVNDGNRLVANLHFLLTNGLVTIQTAESLLTQPASTDNTLHPQSTVVADSVCASMINITPEIGTNQSIAVKETIHAENALKAQMSPYQLQSNNCLLTSVAAPSRIEQFTKVPTVEKCLPTLEKPSTKGTPSKKECDVCGKTFTKPYQVERHKRIHTGERPYKCDLCVKSFAQKSTLQMHQKHHTGDRPYPCPRCEYSFTQKGNLRTHMSRAHRMDTVDSKKTKHNQQSLQHKSPERNLTEVKSLNLDDMSFIEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763369;
90% Identity: iTF_00862032;
80% Identity: -