Basic Information

Insect: Lasioglossum malachurum
Gene Symbol: ZNF236
Assembly: GCA_028455605.1
Location: CM052318.1:24493605-24501515[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0013 0.1 13.2 0.6 2 23 165 186 164 186 0.96

2 22 0.00011 0.0085 16.5 1.1 1 23 192 214 192 214 0.98

3 22 2e-06 0.00015 22.1 0.7 2 23 220 241 220 241 0.97

4 22 0.0056 0.41 11.2 0.4 3 23 249 269 247 269 0.96

5 22 9.8e-05 0.0073 16.8 1.1 2 23 280 301 280 301 0.98

6 22 8.2e-07 6.1e-05 23.3 1.1 1 23 322 344 322 344 0.99

7 22 6.5e-06 0.00048 20.5 0.7 1 20 350 369 350 372 0.95

8 22 5.2e-05 0.0039 17.6 0.5 1 23 378 401 378 401 0.94

9 22 0.00036 0.026 15.0 3.6 1 23 410 433 410 433 0.98

10 22 2.1e-06 0.00015 22.0 2.1 1 23 562 584 562 584 0.98

11 22 0.00035 0.026 15.0 3.3 1 23 590 612 590 612 0.99

12 22 0.006 0.44 11.1 4.1 1 23 618 640 618 640 0.98

13 22 0.0045 0.34 11.5 6.0 1 23 716 738 716 738 0.98

14 22 5.1e-05 0.0038 17.6 4.8 1 23 744 766 744 766 0.99

15 22 0.00023 0.017 15.6 0.8 3 23 774 794 772 794 0.97

16 22 0.00044 0.033 14.7 7.6 1 23 800 822 800 822 0.98

17 22 0.21 16 6.3 1.9 2 23 1217 1238 1216 1238 0.96

18 22 0.00052 0.038 14.5 1.4 1 23 1244 1266 1244 1266 0.98

19 22 2e-07 1.4e-05 25.3 1.4 2 23 1366 1387 1365 1387 0.98

20 22 0.00081 0.06 13.9 3.5 1 23 1393 1415 1393 1415 0.99

21 22 0.00027 0.02 15.4 1.9 1 23 1421 1443 1421 1443 0.98

22 22 0.0016 0.12 13.0 3.6 1 23 1449 1471 1449 1471 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0013	0.1	13.2	0.6	2	23	165	186	164	186	0.96
2	22	0.00011	0.0085	16.5	1.1	1	23	192	214	192	214	0.98
3	22	2e-06	0.00015	22.1	0.7	2	23	220	241	220	241	0.97
4	22	0.0056	0.41	11.2	0.4	3	23	249	269	247	269	0.96
5	22	9.8e-05	0.0073	16.8	1.1	2	23	280	301	280	301	0.98
6	22	8.2e-07	6.1e-05	23.3	1.1	1	23	322	344	322	344	0.99
7	22	6.5e-06	0.00048	20.5	0.7	1	20	350	369	350	372	0.95
8	22	5.2e-05	0.0039	17.6	0.5	1	23	378	401	378	401	0.94
9	22	0.00036	0.026	15.0	3.6	1	23	410	433	410	433	0.98
10	22	2.1e-06	0.00015	22.0	2.1	1	23	562	584	562	584	0.98
11	22	0.00035	0.026	15.0	3.3	1	23	590	612	590	612	0.99
12	22	0.006	0.44	11.1	4.1	1	23	618	640	618	640	0.98
13	22	0.0045	0.34	11.5	6.0	1	23	716	738	716	738	0.98
14	22	5.1e-05	0.0038	17.6	4.8	1	23	744	766	744	766	0.99
15	22	0.00023	0.017	15.6	0.8	3	23	774	794	772	794	0.97
16	22	0.00044	0.033	14.7	7.6	1	23	800	822	800	822	0.98
17	22	0.21	16	6.3	1.9	2	23	1217	1238	1216	1238	0.96
18	22	0.00052	0.038	14.5	1.4	1	23	1244	1266	1244	1266	0.98
19	22	2e-07	1.4e-05	25.3	1.4	2	23	1366	1387	1365	1387	0.98
20	22	0.00081	0.06	13.9	3.5	1	23	1393	1415	1393	1415	0.99
21	22	0.00027	0.02	15.4	1.9	1	23	1421	1443	1421	1443	0.98
22	22	0.0016	0.12	13.0	3.6	1	23	1449	1471	1449	1471	0.98

Sequence Information

Coding Sequence: ATGTTGACGCGACACGCTATAATCACAGAATCTAACCCGGTCGCGACAGTGCCAATAAATATTGTTGCTACCGAAGATGGTAGAACGCTACTAGCAGTGACAGAAGACAAAGACGGTCTATTGGAAGTTATTGCGACTCCAGTCACTCTTATTGGTCACAATGGCACAGCCGGGTCGTTGATGGATATCAAGAATGTAAATGGTTGTTTGATATTACATCCGTCTCCTCTTCAAATTGGTCTGGACTCCGGCGAAGGTTTGGATCTAGAACTGTCCAAGCAATGTGTCCGAGTCGATTCCGATGATCAGAGTCAAATCAAAACCAAAGTAGGCTCTGATACAATTAGTGGTTTTCTTGACAACGAGTCTTCGGAGAGAGAGAAGAGCAACGAAATTGTTAAAGGGAAGTCAACTGCCATGGTCGCGAGTACGAATAGTCTTGGAAGACCCAGAAAGAGCTCTGCCGTTGCGTCGAAAGGTAAAGAGCTCTTGAGATGCGACATATGTCAGCAAGAATTTTCCAAGCAAGCTCCATATAAAAAGCACATGGACAATCATGCGGAGGAGAAGCCACATCGCTGCCCAAAATGTTCGGCATCTTTCAATGTACCGACAAACTTCACGCTTCACATGGCTACACATAATTCTGGCGACCCGAGGTGCCCTGAGTGTGGTAAAAAATTCACAAGAATGGCCAGCTTAAAATCTCATATGCTGTTACACGAGAAGGAAGAGAACTTGTTTTGTACGGAGTGCGAAGACGTTTTTTCGACCAAAACTCAATTGGATGCGCATTTGAAACTACACGGAGAAAAGTGGACGACCGAAGAAGCAAGGAAATGTAAACTGTGTAATAAGCAGTTCAGGCAACCGGCGTTGTATCGACTACACATTCGCGAACATTACAGGTTGCAGACAAAGGTAGTAAAGCAGACGAAAAGAGGGGCCAAACATAAAACGGTATACAAATGTACGATATGCTTAAAATCCTTCCAAAAGCCAAGCCAATTAATGCGTCACATTCGAGTGCATACGGGTGAGAAGCCGTTCAAGTGTACGGTGTGCGGCCGAGCGTTTACGCAAAAGAGTTCTTTACAAATTCACACGTGGCAGCACAATGGCATACGACCCCATGCTTGCGAGCTCTGTAACGCCAGATTTAGTCAAAAAGGCAATTTAAATGCTCATATAACGAGAGTTCATAATGTGCCAGAGGGAGAGCCTATATACAGATGCAACTATTGTTCTTGCGTTTTCAAGAAGCTCGGCAGCTTGAACGGTCACATGAAACGTATGCATACAGGAGTGAACGAGGACAGTGCTACCGTCAGAATCTCCGAATCAGCCGACACCATGGAATCGGACATACGAGCAACAGTAAACAACGTTATAACGCAACTGGCGTCTTTAGAGTCGAACACGGACGAAGTTGAAAATGGAAAACCAGAAAACTTCGGGGAGACCGGGTTATTAGCAAATGTCCCTACCAAAAAAGATATTCTACAACAAGCACTAAAAAATAGCGGGTTACCTAGCAGAAACAAAAGTTTGTGCGACGATCCATCCGAAGCAAAAAAGTTGGATTCACGCACAAATTTCGTTACCTTGCTAGACCGAGCATCGGATAACGGTACCAGAAAATATCTGACGATAAAGCAACGGTGTGTAGGGAACATAAGATGGTACGCGTGTACGTTTTGCCATAAAGAGTTTAAGAAACCATCAGACCTGATACGCCATTTACGAGTGCATACGCAGGAAAAACCATTCAAGTGCACGCACTGTTATCGTTCTTTCGCTTTAAAGTCTACCATGATAGCGCACGAGCGTACTCATACAGGTACCAAGAGATACGCCTGCGGTACTTGCGATAAAACGTTCACTTGCCACAGTAGCTTGGTTATTCATACAAGATCGCACGGAAACTCTGACGAATGTTTTAGCatatcgattgTCGCTCGTTCCAGTAATCGACAGAAAATTAATGCAAACAAGTCGAAGATGTCTCCGAAAACGGAGAGCCTTGCGTCTCAAGTGATACTGCCGGAGCCGTTGGTAATCAGTGACTCCGGAAACAAGATATGCGTGGTACAGATACCTTCGAAAAAGCGTGTTTACGATGCTGCAATCGATCCAGCTAGGCCGCATAAATGTTGGGTGTGCGAAGCGGCATTTCGAAAAATCAGTCATTTGAAGCAACACCATCGACGACACACCGGAGAACGTCCTTACAGGTGTTCCAAATGCGACAGGAGATTCACGTCGAACAGTGTTTTGAAATCGCATTTGCACACGCACGAAGACTCCAGACCTTACGGGTGTTCCATTTGCACCGCAAAGTTCTCCACGCAGAGTAGCATGAAAAGACATCTGGTTACTCACAGTAACAAACGACCGTTCATGTGTCCGTATTGTCACAAGACGTTCAAGACTTACGTGAATTGCCGTAAACATATGAAAATACACAAACACGAGTTGGTGCAACGGCAACTGGAGCAACAAAAACTGGTGTCGCAGGAACAGACTACGAATAACTTGAATGCGAAGGAGAGCTCTGAACAAGAAACAACGTCCGAGCTATCTTGCTGCTCTCCGTCTAGTTTTCCTTCCGGTAACGTTAACGATGTTCCACTCGACGTGTCTGCAAATACCGATACCGGCACTGGCACCGTTGTCGCAACAACTTCCACGTTTTCCGACAATCCGCTGTCCTCGGTCAACTTATCTTTCCAAGAACGAATGGGATCAACCTTTTCGCATACTTTCCCGCATCAATTTCAAAGTGTGATCGAAGCGAAAGAGAAAATAAGGCCACTTTTATCAACGAACTTCGCCACTTCGACATCTATTAATCAGAATATGACTGAGATAACCGTGACAAATCTAGAAAATCCACAGATGTTGCACATCGATGAAAGCGGTTCGGTTACGTTACCAGTTTATTCGACCGATCAAGCTCTAACACCGGAGAGCATACAAGAAATCGAAGAGACATTGAACCAGCAGCTTTTCAACATCGAAATGAACCTTGGTTTGGGAAGCGACCATTCGAAACATTCCTGTGATACCAGCGAATTGCAGAATGCAAAATTGCAGCATCAGCAACCTGCGTTAAATGTCATCTACACAAGCAACAACAATTCTAATAACGGTAACAACGTGGAACAGTCCGAAGAGCAAGTGTTCGCGTCGCAGCTAGATTCGTTCGAGATTGATCATATTACTTTGCAACCGGATGCTGAAATGACACTGGACAATATTGGCCTCGAAACGAATAATTCGACGAGTATGGCCAGCATATTGCCGCAAAGCGTGAAAGGAGAGTTATCGAATCAACTTGCCATTTCGGCTGTTTCGCCTGAGAATCTGACCGACGGTCACCAAGCAGGTGGGTACATGCAAACCGTGTTGCTAATTTCCGAGCAGAATCTTACGGTAAAAGGAAACGCGAGTGATCAATTGAAGATGCACGAAACTGAAAAGAACGCGGATGGAGTCGTCAACGATCCAACGTTCTTAACGGAACAGTTCCGGAGGACGTCCAAGGTTTCGTCGAAGAGCCAGAAAGTATCTTTGTCGTTCGAGTCGTCTCTTTGTCCAAACGATGAGATCAACCCAAATCAATCGCAACAGGGGGAGTCTTTGTTGCAGTGCCATATGTGCAGCCAGCAAGGATTTACGGCAACCAAGTTGAAGGAGCACTTGAAGATCCATCGCGGTAAGAAGGAATATGAGTGCACGGAATGCTCTTCAAGATTTTACACGAACGGTGGATTAAACAGACACTCGAAAACACATACGAATAAACAACACTGGAAGAGTAGTTCGTCGTGCGAAAAATATCTCGGTAATAGAACGCAATCGCGATCGCATAGCAAGGTTCACGAGAGCTTCCCGTGGAACGAGAAGGATGTTTCAATTTTGTCGCAGATACCGGCAACGGTAGATAACGAATCGTCGTTGAACGACGTCACAATAGATTCCGATTCAACCGTGTCCGAAAGAGTTCTGTTGGACACGGTTGCGGAACGAGAGGTGATGGATCGAGTACAGCACGTAGCAACGGAGAACAAGGAACGAAAGGAGTACACGAATAAATGTAAATATTGTCCGAAAACGTTTCGTAAACCAAGCGATCTCGTTAgacacgtccgtacgcacacgggggaacgtccgtacaagtgcgactattgcagcaaaagtttcgctgtgaagtgcacGTTGGATTCGCACACTAAAGTTCATACCGGCAAAAAGACGTTCCGTTGTCACGTGTGTAGCAGTTTGTTCGCGACGAAGGGCAGCTTGAAAGTACACATGCGTTTGCATACAGGTTCGAAACCGTTCAAATGTTCCATCTGCGATTCGAGATTCCGAACCTCGGGGCACAGGAAAGTACATTTGTTGAAGCACGCCCGAGAACACAAAGGTAATTTCAAGAGGAAACAAAAACATTTGAAAGTTGCTGCCATAGCAGAAGTCGCTATGGCGACAGACATTGAAAAATCTGGCGATGCTGGTCGACAAGAGGTGTGCAGCTACGTAGAAGAACAAGAATCGCAACAGCAAGAACAGCAGGATAATCATCAGCACTATGAGCAAACGTCGCAAACGACAGAGGCAGAATATTCGAATTTGCAAGCAATTAACGTCGAAACAACTGCTTCGTGTTTAACCGACCAAATCACATTCGAGTCGGAGGGATCCGTTCCAAACAATAACTCGATACTGTCCGTGAGCGACGGTAACCAATTGGTGGCCAACTTACATTTTCTTCTGGCGAACGGTCTCGTTACCATACAGACTGCAGAACCGTTATTAACCCAGCCGGCATCGACCGGCGATACGCTGCATCAACAATCGACTGTCGTTGCCGATTCCGTCTGCGCATCGATGATCAATATTACCCCTGAGATCGGTACCAACCAAAGTATTGCTGCTAAAGAAACGATTCACGTGGAGAACGCATTGAAAGCGCAACTATCGTCTCCGTATCAATTGCAGTCGACCAACTGTCTTCTAACTAGCGTTACAGCGCCATCGCGGATAGAACAATTCGCAAAGGTTCCGACCGTTGAGAAGTGTTTGCCGACGCTGGAGAAACCCTCTGCCAAAGGAACTCCGTCGAAGAAAgagtgcgacCCGTTGCAACGTAAGTCTCCGGAGAGAAATTTGACCGAGGTTAAAAGTCTGAATTTAGATGACATGTCGTTCATCGAATTTCTTAAATAA
Protein Sequence: MLTRHAIITESNPVATVPINIVATEDGRTLLAVTEDKDGLLEVIATPVTLIGHNGTAGSLMDIKNVNGCLILHPSPLQIGLDSGEGLDLELSKQCVRVDSDDQSQIKTKVGSDTISGFLDNESSEREKSNEIVKGKSTAMVASTNSLGRPRKSSAVASKGKELLRCDICQQEFSKQAPYKKHMDNHAEEKPHRCPKCSASFNVPTNFTLHMATHNSGDPRCPECGKKFTRMASLKSHMLLHEKEENLFCTECEDVFSTKTQLDAHLKLHGEKWTTEEARKCKLCNKQFRQPALYRLHIREHYRLQTKVVKQTKRGAKHKTVYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACELCNARFSQKGNLNAHITRVHNVPEGEPIYRCNYCSCVFKKLGSLNGHMKRMHTGVNEDSATVRISESADTMESDIRATVNNVITQLASLESNTDEVENGKPENFGETGLLANVPTKKDILQQALKNSGLPSRNKSLCDDPSEAKKLDSRTNFVTLLDRASDNGTRKYLTIKQRCVGNIRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHTGTKRYACGTCDKTFTCHSSLVIHTRSHGNSDECFSISIVARSSNRQKINANKSKMSPKTESLASQVILPEPLVISDSGNKICVVQIPSKKRVYDAAIDPARPHKCWVCEAAFRKISHLKQHHRRHTGERPYRCSKCDRRFTSNSVLKSHLHTHEDSRPYGCSICTAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELVQRQLEQQKLVSQEQTTNNLNAKESSEQETTSELSCCSPSSFPSGNVNDVPLDVSANTDTGTGTVVATTSTFSDNPLSSVNLSFQERMGSTFSHTFPHQFQSVIEAKEKIRPLLSTNFATSTSINQNMTEITVTNLENPQMLHIDESGSVTLPVYSTDQALTPESIQEIEETLNQQLFNIEMNLGLGSDHSKHSCDTSELQNAKLQHQQPALNVIYTSNNNSNNGNNVEQSEEQVFASQLDSFEIDHITLQPDAEMTLDNIGLETNNSTSMASILPQSVKGELSNQLAISAVSPENLTDGHQAGGYMQTVLLISEQNLTVKGNASDQLKMHETEKNADGVVNDPTFLTEQFRRTSKVSSKSQKVSLSFESSLCPNDEINPNQSQQGESLLQCHMCSQQGFTATKLKEHLKIHRGKKEYECTECSSRFYTNGGLNRHSKTHTNKQHWKSSSSCEKYLGNRTQSRSHSKVHESFPWNEKDVSILSQIPATVDNESSLNDVTIDSDSTVSERVLLDTVAEREVMDRVQHVATENKERKEYTNKCKYCPKTFRKPSDLVRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFKCSICDSRFRTSGHRKVHLLKHAREHKGNFKRKQKHLKVAAIAEVAMATDIEKSGDAGRQEVCSYVEEQESQQQEQQDNHQHYEQTSQTTEAEYSNLQAINVETTASCLTDQITFESEGSVPNNNSILSVSDGNQLVANLHFLLANGLVTIQTAEPLLTQPASTGDTLHQQSTVVADSVCASMINITPEIGTNQSIAAKETIHVENALKAQLSSPYQLQSTNCLLTSVTAPSRIEQFAKVPTVEKCLPTLEKPSAKGTPSKKECDPLQRKSPERNLTEVKSLNLDDMSFIEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763369;
90% Identity: iTF_00862032;
80% Identity: -