Etag006409.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Erynnis tages
Gene Symbol
-
Assembly
GCA_905147235.1
Location
LR990081.1:1923869-1928774[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 3.1e-06 0.00018 21.8 1.7 1 23 219 241 219 241 0.98
2 9 2.9e-08 1.7e-06 28.1 1.6 3 23 249 269 247 269 0.98
3 9 0.0001 0.0059 17.0 0.3 1 23 275 297 275 297 0.98
4 9 1.1e-05 0.00064 20.1 1.7 1 23 303 325 303 325 0.99
5 9 2.2e-05 0.0013 19.1 1.7 2 23 509 530 508 530 0.96
6 9 2.8e-09 1.7e-07 31.3 1.6 1 23 536 558 536 558 0.98
7 9 0.0024 0.14 12.7 0.6 3 23 566 586 564 586 0.97
8 9 4.6e-05 0.0027 18.1 1.4 1 23 592 614 592 614 0.99
9 9 0.019 1.1 9.8 0.8 1 23 620 644 620 644 0.95

Sequence Information

Coding Sequence
ATGGGCTGCAGTGACCACTCATTAGTACGCTTCTTTAATACAACTGCTCCTTACGTGCTCTACAAAGATGGAGTGGAGCGTGCTCCTCCCGGAACACAATGGGGCGGCGCCGTCCTGGACGGCGGGTACCAGATGCAGCACCAAAGCCCCGGCGGGCCGTCACCGCAGCCCGAGCCGCAGCTCGCGTCCCCCGCGCCCTCGCCGTATCCCCCCGCCCCTCCGCCCCCCGACCCCTCGGCGGAGGAGGCCGCTCAGCAGCTCGCTCAGCAACAGGCCCAGCAGCAAGCGCAACAGCAGCAACAACAACAGCAACAGACTTCACCCGAACACATGCAAGTGGAACAGCAGCTACAAAACCAGCAACAGCCCCAGCCAACATCGCAAGATCATCTCGATCGAACGCCTTGTTTCGTACCGCAGCCAGACTTACAACAGCAATATGCGACGCCATATTTCAAGGAGACGAGACCCACGAGTCACATGCTAGGGACCGGTGGTTTCCCTCTGCACTACTTGAAGCAGAACGGCGGTGTGCTCTCGCTAGAAGGGCCCCTGGACCAGTACGCGACGCCTGACCTCCGCCACCTACCGGACATCGTCCAGCCCGAGCCACCCAAGCCTCGGAAGCACAATCCGAACTCCGAGCTCCGCCTGTTCAAGTGCCTGACGTGCGGCAAAGACTTCAAGCAGAAGTCGACGCTGCTCCAACACGAGCGCATCCACACGGACTCCCGGCCGTACGGCTGTCCCGAGTGCGGCAAGCGGTTCCGCCAGCAGTCGCACCTCACGCAGCACCTGCGCATCCACGCGAACGAGAAACCCTACGCGTGCGTCTACTGTCCCCGCTCGTTCCGGCAGCGCGCGATCCTGAACCAGCACCTGCGAATCCATTCTGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCCCCTCCCCGCTCCCCGCGCGCGCCGCCTGCGCTGACCCGAGAGCCTCGCGTCAGTGCCGGCGCCGCCCGCGATCCCCGCCGCACCCCACTCGTTCGATTCGGTCTCGCATCCATTGGCCTTCCTATCAGACAAATTCTCGGTCCCCTAGTCGCCCGCTTAGCGGAGGGCGCCCGCGAGACGCGGAACCGACCGCCGGACGTTCCCGTAACCGTCCTAAACGTGTCGCCGCATCTCATCTTCAAGAACGGGACGACGCCGACCCTTTGGCCCCAGGACGTGCCCTTCCCGCCGGACGAGAACAAGGAGGAGATACAATCGACGTTCGGAGACGCGGACGGCCAGAACGGCGAACAGCGCGGCTCGTGCTTCTCCCCCGGCGACACCGCCCAGTATCCCGCCTACTTCAAGGACACGAAAGGTCTCAACCACGCGGTGTTCGGCTCCGGCCTCTCGCTTCAGTATCTCAAGGGCGGAAAGCTCCCGGACGTCCTCGGCGGGCGCGCGATGCCCCTCTACGTTCGCTGCCCGATCTGCCAGAAGGAGTTCAAGCAGAAGTCGACGCTGCTCCAGCACGGCTGCATCCACATCGAGTCGCGGCCCTACCCGTGCCCGGAGTGCGGCAAGCGGTTCCGCCAGCAGTCGCACCTCACGCAGCACCTGCGCATCCACACGAACGAGAAGCCGTACGGCTGCGTGTACTGCCCGCGGTTCTTCCGGCAGCGGACGATCCTGAACCAGCACCTGCGCATCCACACCGGCGAGAAGCCGTACAAGTGCAACCAGTGCGGGAAGGACTTCAGGCAGAAGGCGATCCTGGACCAGCACACGCGGACGCACCAGGGCGACCGGCCGTTCTGCTGCCCGATGCCGAACTGCCGGCGGCGGTTCGCGACAGAGCCGGAGGTGAAGAAGCACATCGACAACCACATGAACCCGCACGCGGCGAAGGCGCGACGGGCGGACGCGAAGACGCCGCGGCCGCTGCCCCCCGCGGCGGCGGTGGTGAAGCCGGAGCTGTACTTCCCGCAGTGCTACGCGCCGCCGTTCCAGCAGTTCCCGGCGGGCGGGGAGTTCAAGCCGGCGGTGGGGCCGGGCGCGGGCGTGGCGTGCCTGCCGGCGCAGTGA
Protein Sequence
MGCSDHSLVRFFNTTAPYVLYKDGVERAPPGTQWGGAVLDGGYQMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDPSAEEAAQQLAQQQAQQQAQQQQQQQQQTSPEHMQVEQQLQNQQQPQPTSQDHLDRTPCFVPQPDLQQQYATPYFKETRPTSHMLGTGGFPLHYLKQNGGVLSLEGPLDQYATPDLRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPPRSPRAPPALTREPRVSAGAARDPRRTPLVRFGLASIGLPIRQILGPLVARLAEGARETRNRPPDVPVTVLNVSPHLIFKNGTTPTLWPQDVPFPPDENKEEIQSTFGDADGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHAVFGSGLSLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCNQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADAKTPRPLPPAAAVVKPELYFPQCYAPPFQQFPAGGEFKPAVGPGAGVACLPAQ