Basic Information

Insect: Idaea biselata
Gene Symbol: -
Assembly: GCA_958496205.1
Location: OY292399.1:12328275-12330459[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.7e-06 0.00027 21.9 1.7 1 23 174 196 174 196 0.98

2 9 3.5e-08 2.6e-06 28.3 1.6 3 23 204 224 202 224 0.98

3 9 0.00012 0.0088 17.2 0.3 1 23 230 252 230 252 0.98

4 9 1.3e-05 0.00095 20.2 1.7 1 23 258 280 258 280 0.99

5 9 2.6e-05 0.0019 19.2 1.7 2 23 458 479 457 479 0.96

6 9 3.4e-09 2.5e-07 31.5 1.6 1 23 485 507 485 507 0.98

7 9 0.0029 0.21 12.8 0.6 3 23 515 535 513 535 0.97

8 9 7.4e-05 0.0055 17.8 1.5 1 23 541 563 541 563 0.99

9 9 0.023 1.7 10.0 0.8 1 23 569 593 569 593 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.7e-06	0.00027	21.9	1.7	1	23	174	196	174	196	0.98
2	9	3.5e-08	2.6e-06	28.3	1.6	3	23	204	224	202	224	0.98
3	9	0.00012	0.0088	17.2	0.3	1	23	230	252	230	252	0.98
4	9	1.3e-05	0.00095	20.2	1.7	1	23	258	280	258	280	0.99
5	9	2.6e-05	0.0019	19.2	1.7	2	23	458	479	457	479	0.96
6	9	3.4e-09	2.5e-07	31.5	1.6	1	23	485	507	485	507	0.98
7	9	0.0029	0.21	12.8	0.6	3	23	515	535	513	535	0.97
8	9	7.4e-05	0.0055	17.8	1.5	1	23	541	563	541	563	0.99
9	9	0.023	1.7	10.0	0.8	1	23	569	593	569	593	0.95

Sequence Information

Coding Sequence: ATGCAGCACCAGAGCCCCGGCGGCCCCAGTCCGCAACCGGAGCCCCAGCTCGCTTCGCCCGCACCGTCTCCTTATCCACCCGCACCTCCACCTCCAGACCAATCGGCAGCCGAAGACGCCGCTCAACAGCTCGCTCAGCAACAAGCACAACAGCAAGCGCAACAACAGGCCCAGCAACAGCAGCAACAACAGACTTCTCCCGAACATATGACCGTCGAGCAACAGCTACAAAACTCACAGCCACCTCCGCAGGATCACCTAGACCGAACGCCTTGCTTCGTCCCACAACCAGATCTTCAACAACAATATACACCTTATTTCAAAGAGACGCGGCCTACGAGCCATATGCTCGGCACTGGTGGATTTCCATTACACTATCTAAAACAGAACGGCGGCGTCCTCTCGCTCGAGGCACCGCTCGACCAGTATACGACACCCGATTTGCGTCATCTGCCCGATATCGTCCAACCGGAGCCGCCGAAACCACGCAAGCACAATCCCAACTCGGAGTTGCGGCTATTTAAATGCCTAACGTGCGGGAAAGACTTTAAGCAGAAGTCGACACTGCTCCAGCACGAGCGGATCCACACAGACTCGCGGCCGTACGGGTGCCCGGAGTGCGGCAAGCGGTTCCGGCAGCAGTCCCACCTGACGCAGCACCTGAGGATCCACGCCAACGAGAAGCCGTACGCGTGCGTGTACTGCCCGCGCTCCTTCCGCCAGCGCGCCATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCCCCTCCCCGGCCCCCGCGCGCGTCGCCAGCTCCCCCCGGAGCCGGCGCCGCCCGCGCTCCCCGCCGCCCCCCGCACGTTCGATTCGGTCTCGCAACCATTGGCCTTCCTATCAGACAAATTCTCGGACCTCTCTTTGCCCGGCTAGCGGAGGGCGCTCGCGAGACACGGAACCGATCGCCGGACGATCCCGTAACCGTCCTTAACGTGTCGCCCCATCTCATCTTCAAGAACGGAACGACGCCAACGCTCTGGCCTCAGGACGTGCCCTACCCACCCGACGAGAATAAAGAGGAGATTCAGTCGACGTTCGGAGACGACGGCCAGGGCGGTGAACAGCGCGGATCTTGCTTCTCGCCAGGAGACACAGCCCAATACCCCGCTTACTTCAAGGATACCAAAGGCCTCAACCATACAGTCTTCGGTTCCGGGATTTCGCTCCAATATCTTAAAGGCGGCAAACTTCCCGATGTGCTCGGTGGCCGCGCGATGCCGCTCTACGTACGCTGCCCTATCTGCCAGAAGGAGTTCAAGCAGAAGTCTACTTTACTGCAACACGGCTGCATCCACATAGAGTCACGGCCGTATCCATGCCCCGAATGCGGCAAGCGGTTCCGACAACAGTCGCATTTGACGCAACATCTCCGTATTCACACCAACGAGAAACCGTACGGTTGCGTGTACTGTCCACGTTTCTTCCGGCAACGAACGATCTTGAACCAACACCTGCGTATACACACCGGTGAGAAACCTTACAAATGCACGCAATGCGGAAAAGACTTCAGGCAGAAGGCGATTCTGGACCAGCACACGCGCACGCATCAAGGCGACCGGCCGTTCTGTTGTCCAATGCCGAACTGTAGGCGGCGGTTCGCGACCGAGCCCGAGGTCAAGAAACACATCGACAACCACATGAACCCGCACGGGGGTAAAGCGCGACGCGCTGACGCTGCGAAATCCCCTCGGCCGTTACCGCCAGCTTCAGCAGTTGTGAAACCGGAGCTGTACTTCCCGCAGTGTTACGCGCCACCGTTCCAGCAGTTCGGTGGGCAGGAGTTCAAGCCGACTGTGGGGACCGCTTGCCTCCCGGCGCAGTGA
Protein Sequence: MQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDQSAAEDAAQQLAQQQAQQQAQQQAQQQQQQQTSPEHMTVEQQLQNSQPPPQDHLDRTPCFVPQPDLQQQYTPYFKETRPTSHMLGTGGFPLHYLKQNGGVLSLEAPLDQYTTPDLRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPPRPPRASPAPPGAGAARAPRRPPHVRFGLATIGLPIRQILGPLFARLAEGARETRNRSPDDPVTVLNVSPHLIFKNGTTPTLWPQDVPYPPDENKEEIQSTFGDDGQGGEQRGSCFSPGDTAQYPAYFKDTKGLNHTVFGSGISLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHGGKARRADAAKSPRPLPPASAVVKPELYFPQCYAPPFQQFGGQEFKPTVGTACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00428362;
90% Identity: iTF_00673685;
80% Identity: -