Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990256.1:14408868-14413415[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.5e-06 0.00025 21.8 1.7 1 23 234 256 234 256 0.98

2 9 3.4e-08 2.4e-06 28.1 1.6 3 23 264 284 262 284 0.98

3 9 0.00011 0.008 17.0 0.3 1 23 290 312 290 312 0.98

4 9 1.2e-05 0.00086 20.0 1.7 1 23 318 340 318 340 0.99

5 9 2.5e-05 0.0018 19.1 1.7 2 23 524 545 523 545 0.96

6 9 3.3e-09 2.3e-07 31.3 1.6 1 23 551 573 551 573 0.98

7 9 0.0028 0.19 12.6 0.6 3 23 581 601 579 601 0.97

8 9 7.1e-05 0.005 17.6 1.5 1 23 607 629 607 629 0.99

9 9 0.022 1.5 9.8 0.8 1 23 635 659 635 659 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.5e-06	0.00025	21.8	1.7	1	23	234	256	234	256	0.98
2	9	3.4e-08	2.4e-06	28.1	1.6	3	23	264	284	262	284	0.98
3	9	0.00011	0.008	17.0	0.3	1	23	290	312	290	312	0.98
4	9	1.2e-05	0.00086	20.0	1.7	1	23	318	340	318	340	0.99
5	9	2.5e-05	0.0018	19.1	1.7	2	23	524	545	523	545	0.96
6	9	3.3e-09	2.3e-07	31.3	1.6	1	23	551	573	551	573	0.98
7	9	0.0028	0.19	12.6	0.6	3	23	581	601	579	601	0.97
8	9	7.1e-05	0.005	17.6	1.5	1	23	607	629	607	629	0.99
9	9	0.022	1.5	9.8	0.8	1	23	635	659	635	659	0.95

Sequence Information

Coding Sequence: ATGAAGTTAACAACTAAAAATGTGTTTTGTACAAAGGTACATCTTAGATTGTACGAATCGATTGTTGTGGTTCGAGTTTTTAAAAGATTTTATCAAACCTACACGACCGCCCCGTACGTCCTCTACAAGGATGGAGTGGAGCGCGCCCCGCCGGGCACGCAGTGGGGTGGCGCCGTGCTGGACGGCGGCTACCAGAGCATGCAGCACCAGAGCCCCGGGGGACCCTCCCCGCAGCCCGAGCCGCAACTAGCCTCGCCAGCGCCCTCGCCCTACCCGCCCGCGCCGCCGCCCCCCGACCCCGCGGCGGACGAGGCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCTTCTCAGGACCATCTCGATCGCACCCCGTGCTTCATCCCCCAGCCGGAGCTGCAGCAGCAGTACACGCCGTACTTTAAGGACACCAGACCCGCGAGTCACATGCTCGGAACGGGCGGCTTTCCGCTCCATTATCTGAAACAGAACGGCGGAGTTCTATCGCTCGAGGGCCCGCTAGACCAGTACGCCACTCCCGATTTGCGCCACCTACCTGATATCGTGCAAGCGGAGCCCCCGAAGCCTCGAAAACACAATCCCAACTCCGAGCTCCGCCTGTTCAAATGCCTGACGTGCGGTAAAGACTTCAAACAGAAGTCGACGCTGCTGCAGCACGAGCGGATCCACACAGACTCGCGGCCGTACGGGTGCCCGGAGTGCGGCAAGCGGTTCCGCCAGCAGTCCCACCTGACGCAGCACCTCCGCATCCACGCCAACGAGAAACCGTACGCGTGCGTGTACTGCCCGCGCTCCTTCCGCCAGCGGGCCATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCCCCGGCCAGCTCCCCGCACGCGCCGCCCGCACTGACCCGAAGCGATCGCGTCAATGCCGGCGCCGCCTGCGATCCCCGCCAACCTTCACCCGTTCGATTCGGTCTCGCATCCATTGGCCTTCCTATCAGTCAAATTCTCGGTCCCCTCGTCGCCCGCCTAGCGGAGCGCGCTCGCGAGACGCGGAACCGATCGCCGGACGCTCCTGTAACCGTCCCCAACGTTTCCCCGCATCTTATCTTCAAGAACGGGACGACGCCGACGTTGTGGCCTCAAGACGTACCGTTCCCGCCGGACGAAAACAAGGAGGAGATACAGTCAACCTTCGGGGACGCGGACGGCCAGAACGGGGAGCAGCGCGGGTCATGTTTTTCGCCCGGCGATACGGCTCAGTATCCAGCATACTTTAAAGACACGAAGGGTCTGAATCACACAGTTTTCGGCTCTGGATTGTCCCTTCAATATCTGAAGGGCGGAAAGCTTCCGGACGTCCTTGGCGGGCGCGCGATGCCGCTGTACGTACGTTGTCCCATTTGCCAGAAGGAGTTCAAGCAGAAGTCCACTCTCTTACAGCACGGCTGCATCCACATCGAGTCGAGGCCCTACCCGTGCCCGGAGTGCGGCAAACGCTTCCGACAGCAGTCGCATCTCACGCAACATCTGCGCATTCACACTAACGAGAAGCCCTACGGGTGCGTATACTGCCCGCGATTCTTCCGCCAGCGGACGATCCTCAACCAGCACCTACGCATTCACACCGGAGAGAAGCCGTACAAGTGCACGCAGTGCGGAAAAGACTTCAGGCAGAAGGCCATCCTGGACCAGCACACGCGGACGCACCAGGGCGACCGGCCATTCTGCTGCCCGATGCCGAACTGCCGGCGGCGCTTCGCGACGGAGCCGGAGGTGAAAAAACACATCGACAACCACATGAACCCGCACGCGGCCAAGACCCGGCGCGCCGACGCCAAGACGCCGCGCCCGCTGCCGCCCGCATCCGCCGTGGTCAAGCCCGAGCTGTACTTCCCGCAGTGCTACGCGCCGCCCTTCCAGCAGTTCGGCGGCGGGCCGGAGTTCAAGCCGGCGGTGGGGGCGGGCGGCGCCTGCCTGCCCGCGCAGTGA
Protein Sequence: MKLTTKNVFCTKVHLRLYESIVVVRVFKRFYQTYTTAPYVLYKDGVERAPPGTQWGGAVLDGGYQSMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDPAADEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSQDHLDRTPCFIPQPELQQQYTPYFKDTRPASHMLGTGGFPLHYLKQNGGVLSLEGPLDQYATPDLRHLPDIVQAEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPASSPHAPPALTRSDRVNAGAACDPRQPSPVRFGLASIGLPISQILGPLVARLAERARETRNRSPDAPVTVPNVSPHLIFKNGTTPTLWPQDVPFPPDENKEEIQSTFGDADGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHTVFGSGLSLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKTRRADAKTPRPLPPASAVVKPELYFPQCYAPPFQQFGGGPEFKPAVGAGGACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078408;
90% Identity: iTF_00673685;
80% Identity: -