Basic Information

Insect: Heliconius hewitsoni
Gene Symbol: -
Assembly: GCA_018230445.1
Location: DWAN01001869.1:3320-5354[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.1e-06 0.00026 21.9 1.7 1 23 173 195 173 195 0.98

2 9 3e-08 2.5e-06 28.3 1.6 3 23 203 223 201 223 0.98

3 9 0.0001 0.0083 17.2 0.3 1 23 229 251 229 251 0.98

4 9 1.1e-05 0.0009 20.2 1.7 1 23 257 279 257 279 0.99

5 9 2.3e-05 0.0018 19.2 1.7 2 23 456 477 455 477 0.96

6 9 2.9e-09 2.4e-07 31.5 1.6 1 23 483 505 483 505 0.98

7 9 0.0025 0.2 12.8 0.6 3 23 513 533 511 533 0.97

8 9 6.3e-05 0.0052 17.8 1.5 1 23 539 561 539 561 0.99

9 9 0.019 1.6 10.0 0.8 1 23 567 591 567 591 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.1e-06	0.00026	21.9	1.7	1	23	173	195	173	195	0.98
2	9	3e-08	2.5e-06	28.3	1.6	3	23	203	223	201	223	0.98
3	9	0.0001	0.0083	17.2	0.3	1	23	229	251	229	251	0.98
4	9	1.1e-05	0.0009	20.2	1.7	1	23	257	279	257	279	0.99
5	9	2.3e-05	0.0018	19.2	1.7	2	23	456	477	455	477	0.96
6	9	2.9e-09	2.4e-07	31.5	1.6	1	23	483	505	483	505	0.98
7	9	0.0025	0.2	12.8	0.6	3	23	513	533	511	533	0.97
8	9	6.3e-05	0.0052	17.8	1.5	1	23	539	561	539	561	0.99
9	9	0.019	1.6	10.0	0.8	1	23	567	591	567	591	0.95

Sequence Information

Coding Sequence: ATGCAGCACCAGAGCCCTGGCGGGCCCTCCCCACAGCCGGAGCCCCAGCTCGCCTCCCCCGCCCCGTCCCCGTACCCGCCTGCCCCGCCCCCTCCCGACCAGTCCGCAGACGAGGCCGCCCAACAGCTCGCGCAGCAACAAGCGCAACAACAGGCGCAGCAACAACAAGCGCAACAACAACAAACTTCTCCCGAACACTTGCAAGTGGACCAGCAGCTCCAAAACCAAACACAACCTCCAACACAAGATCATCTCGACAGAACTCCATGCTTTGTTCCGCAACCGGACTTACAACAACAATATGCAACTCCTTACTTCAAAGAAACAAGACCAGCGAGTCACATGCTAGGAACGGGTGGCTTTCCATTGcattatttgaaacaaaacGGTGGTGTGCTATCACTAGAAGGTCCTTTGGACCAGTATGCGACACCAGACTTGCGTCACTTACCAGATATAGTGCAAGCTGAGCCTCCCAAACCTCGGAAACACAACCCGAATTCAGAACTGCGCCTGTTCAAATGCCTAACCTGTGGCAAAGACTTCAAGCAGAAATCAACGTTACTCCAGCACGAGCGGATCCACACGGACTCGCGGCCATACGGGTGTCCGGAGTGCGGCAAGCGGTTCCGCCAGCAGTCCCATCTGACGCAGCACCTACGCATCCACGCGAACGAGAAACCGTACGCGTGTGTGTACTGCCCGCGCTCGTTCCGGCAGCGCGCCATCCTCAACCAGCACCTCCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACAACTATATGCCCCGCCCCGGTCCCCGCGCGCGGCGCCGGCGCTGGTCATACACAGTAACGGCGCCGCGCGCGCCTCCACCCGCCCCCCACACGTTCGGTTCGCATCCATTGGCCTTCCTATCAAACAAATTCTCGGTCCCCTCGTCGCCCACTTAGCGATGGGTGTTCGCGAGAACCGATCGCCGGACGCTCCCGTAACCGTCCTAAACGTATCTCCGCATCTTATCTTCAAGAACGGGACAACGCCTACACTGTGGCCGCAAGATGTTCCGTTTCCACCGGATGAGAACAAAGAAGAGGTGCAGTCTACCTTCGGCGACACCGATGGGCAGAACGGCGAGCAGCGAGGATCATGTTTTTCACCGGGCGATACCGCACAATACCCAGCTTACTTCAAAGATACGAAAGGTCTCAACCACGCAGTCTTTGGTTCAGGGCTGTCACTTCAATACATTAAAGGAGGAAAATTACCCGATGTGCTCGGTGGTCGTGCAATGCCTTTGTACGTTCGTTGCCCTATCTGCCAAAAAGAATTCAAGCAGAAGTCAACACTTCTACAGCACGGGTGCATACACATAGAGTCGCGGCCGTACCCTTGTCCGGAGTGCGGCAAGCGTTTCCGCCAGCAGTCACACTTAACTCAGCACTTGCGCATTCACACAAACGAAAAGCCATACGGATGCGTATATTGCCCTCGATTTTTCCGACAACGGACGATACTCAACCAGCACCTGCGCATCCACACGGGCGAGAAGCCGTACAAGTGCACGCAGTGCGGCAAGGACTTCCGGCAGAAGGCCATCCTCGACCAGCACACGCGCACGCACCAGGGCGACCGGCCCTTCTGCTGCCCCATGCCCAACTGCCGGCGCCGCTTCGCCACCGAGCCCGAGGTGAAGAAGCACATCGACAACCACATGAACCCGCACGCCGCCAAGACGCGGCGCGACTCCAAGACGCCGCGGCCGCTGCCGCCCGCCGCCGTGGTGAAGCCCGAGCTGTACTTCCCGCAGTGCTACGCGCCGCCCTTCCAGCAGTTCGCGGCGCCCGCGGAGTTCAAGCCCGCGGTGGGCGGCGGCGTGGCGTGCCTGCCGGCGCAGTGA
Protein Sequence: MQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDQSADEAAQQLAQQQAQQQAQQQQAQQQQTSPEHLQVDQQLQNQTQPPTQDHLDRTPCFVPQPDLQQQYATPYFKETRPASHMLGTGGFPLHYLKQNGGVLSLEGPLDQYATPDLRHLPDIVQAEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSQLYAPPRSPRAAPALVIHSNGAARASTRPPHVRFASIGLPIKQILGPLVAHLAMGVRENRSPDAPVTVLNVSPHLIFKNGTTPTLWPQDVPFPPDENKEEVQSTFGDTDGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHAVFGSGLSLQYIKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKTRRDSKTPRPLPPAAVVKPELYFPQCYAPPFQQFAAPAEFKPAVGGGVACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00358842;
90% Identity: iTF_00673685;
80% Identity: iTF_00778180; iTF_00782822;