Basic Information

Insect: Heliconius nattereri
Gene Symbol: -
Assembly: GCA_013403645.1
Location: JAAIXI010000232.1:8286650-8290478[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.7e-06 0.00019 21.8 1.7 1 23 213 235 213 235 0.98

2 9 2.6e-08 1.8e-06 28.2 1.6 3 23 243 263 241 263 0.98

3 9 8.8e-05 0.006 17.1 0.3 1 23 269 291 269 291 0.98

4 9 9.5e-06 0.00065 20.1 1.7 1 23 297 319 297 319 0.99

5 9 2e-05 0.0013 19.1 1.7 2 23 496 517 495 517 0.96

6 9 2.5e-09 1.7e-07 31.4 1.6 1 23 523 545 523 545 0.98

7 9 0.0021 0.15 12.7 0.6 3 23 553 573 551 573 0.97

8 9 5.5e-05 0.0037 17.7 1.5 1 23 579 601 579 601 0.99

9 9 0.017 1.2 9.9 0.8 1 23 607 631 607 631 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.7e-06	0.00019	21.8	1.7	1	23	213	235	213	235	0.98
2	9	2.6e-08	1.8e-06	28.2	1.6	3	23	243	263	241	263	0.98
3	9	8.8e-05	0.006	17.1	0.3	1	23	269	291	269	291	0.98
4	9	9.5e-06	0.00065	20.1	1.7	1	23	297	319	297	319	0.99
5	9	2e-05	0.0013	19.1	1.7	2	23	496	517	495	517	0.96
6	9	2.5e-09	1.7e-07	31.4	1.6	1	23	523	545	523	545	0.98
7	9	0.0021	0.15	12.7	0.6	3	23	553	573	551	573	0.97
8	9	5.5e-05	0.0037	17.7	1.5	1	23	579	601	579	601	0.99
9	9	0.017	1.2	9.9	0.8	1	23	607	631	607	631	0.95

Sequence Information

Coding Sequence: ATGGCACATGAAAAGACGTACGACACGACAGCGCCTTACGTGCTATATAAAGATGGAGTGGAGCGCGCTCCGCCTGGCACGCAATGGGGTGGTGCAGTGTTGGACGGAGGCTACCAAGCCATGCAGCACCAGAGCCCTGGTGGACCCTCCCCACAGCCGGAGCCCCAGCTCGCCTCCCCCGCCCCGTCCCCATACCCGCCTGCCCCGCCCCCTCCCGACCCGTCCGCAGACGAGGCCGCCCAGCAACTGGCTCAGCAACAAGCGCAACAACAAGCGCAGCAACAACAAGCGCAACAACAACAAACTTCCCCCGAACACTTGCAAGTGGACCAGCAGCTCCAAAATCAAACACAACCTCCATCCCAAGATCATCTCGACAGGACTCCATGCTTTGTTCCGCAACCGGACTTACAACAACAATACGCAACTCCTTACTTCAAAGAAACAAGACCAGCGAGTCATATGCTAGGAACGGGTGGCTTTCCACTGCATTATTTGAAACAAAACGGTGGCGTATTATCACTAGAAGGTCCATTGGACCAATATGCGACACCAGACTTGCGTCACTTACCAGACATAGTGCAAGCTGAACCTCCCAAGCCTCGGAAACACAACCCGAACTCAGAACTGCGCCTGTTCAAATGCCTTACCTGCGGTAAAGACTTCAAGCAGAAATCGACGTTACTCCAGCACGAGCGGATCCACACAGACTCGCGGCCGTACGGGTGTCCGGAGTGCGGCAAGCGGTTCCGCCAGCAGTCCCACCTGACGCAGCACCTGCGCATCCACGCGAACGAGAAACCGTACGCGTGCGTGTACTGCCCGCGCTCGTTCCGGCAGCGCGCCATCCTCAACCAGCACCTCCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACAACTATATGCCCCGCCCCGGTCCCCGCGCGCGGCGCCGGCGCTGGTCATGCACAGTAACGGCGCCGCGCGCGCCTCCACCCGCCCCCCACACGTTCGGTTCGCATCCATTGGCCTTCCTATCAAACAAATTCTCGGTCCCCTCGTCGCCCACTTAGCGATGGGTGTTCGCGAGAACCGATCGCCGGACGCTCCCGTAACCGTCCTAAACGTATCTCCGCATCTTATCTTCAAGAACGGGACGACGCCTACACTGTGGCCGCAAGATGTTCCGTTTCCACCGGACGAGAACAAAGAAGAGGTGCAGTCTACCTTCGGTGACACCGATGGGCAGAATGGCGAGCAGCGAGGATCATGTTTTTCACCGGGCGATACCGCACAATACCCAGCGTACTTTAAAGATACGAAAGGTCTCAATCACGCCGTCTTTGGTTCAGGGCTGTCACTTCAGTACATTAAAGGAGGTAAATTACCCGATGTGCTCGGTGGTCGTGCAATGCCTTTGTACGTTCGTTGCCCTATCTGCCAAAAAGAATTCAAGCAGAAGTCGACACTTTTACAACATGGCTGCATACACATAGAGTCGCGGCCGTATCCTTGCCCGGAGTGTGGCAAACGTTTCCGCCAGCAGTCACACTTGACTCAGCACTTGCGCATTCACACAAACGAAAAGCCATACGGATGCGTATATTGTCCTCGATTTTTCCGGCAACGGACGATACTGAACCAGCATCTGCGCATCCACACGGGCGAGAAGCCGTACAAGTGCACGCAGTGCGGCAAGGACTTCCGGCAGAAGGCTATCCTCGACCAGCACACGCGCACGCACCAGGGCGACCGGCCCTTCTGCTGCCCCATGCCCAACTGCCGGCGCCGCTTCGCCACCGAGCCCGAGGTGAAGAAGCACATCGACAACCACATGAACCCGCACGCCGCCAAGACGCGCCGTGACTCCAAGACGCCGCGGCCGCTGCCACCCGCAGCCGTGGTGAAGCCCGAGTTGTACTTCCCGCAGTGCTACGCGCCGCCCTTCCAGCAGTTTTCGGCGCCCGCGGAGTTCAAACCCGCGGTAGGCGGCGGTGTGGCGTGCCTACCGGCGCAGTGA
Protein Sequence: MAHEKTYDTTAPYVLYKDGVERAPPGTQWGGAVLDGGYQAMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDPSADEAAQQLAQQQAQQQAQQQQAQQQQTSPEHLQVDQQLQNQTQPPSQDHLDRTPCFVPQPDLQQQYATPYFKETRPASHMLGTGGFPLHYLKQNGGVLSLEGPLDQYATPDLRHLPDIVQAEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSQLYAPPRSPRAAPALVMHSNGAARASTRPPHVRFASIGLPIKQILGPLVAHLAMGVRENRSPDAPVTVLNVSPHLIFKNGTTPTLWPQDVPFPPDENKEEVQSTFGDTDGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHAVFGSGLSLQYIKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKTRRDSKTPRPLPPAAVVKPELYFPQCYAPPFQQFSAPAEFKPAVGGGVACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00358842;
90% Identity: iTF_00673685;
80% Identity: -