Basic Information

Insect: Cyaniris semiargus
Gene Symbol: -
Assembly: GCA_905187585.1
Location: LR994560.1:12974285-12978037[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.8e-06 0.00021 22.0 1.7 1 23 134 156 134 156 0.98

2 9 2.7e-08 2e-06 28.3 1.6 3 23 164 184 162 184 0.98

3 9 9.1e-05 0.0069 17.2 0.3 1 23 190 212 190 212 0.98

4 9 9.8e-06 0.00074 20.3 1.7 1 23 218 240 218 240 0.99

5 9 2e-05 0.0015 19.3 1.7 2 23 424 445 423 445 0.96

6 9 2.6e-09 2e-07 31.5 1.6 1 23 451 473 451 473 0.98

7 9 0.0022 0.17 12.9 0.6 3 23 481 501 479 501 0.97

8 9 5.7e-05 0.0043 17.9 1.5 1 23 507 529 507 529 0.99

9 9 0.017 1.3 10.1 0.8 1 23 535 559 535 559 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.8e-06	0.00021	22.0	1.7	1	23	134	156	134	156	0.98
2	9	2.7e-08	2e-06	28.3	1.6	3	23	164	184	162	184	0.98
3	9	9.1e-05	0.0069	17.2	0.3	1	23	190	212	190	212	0.98
4	9	9.8e-06	0.00074	20.3	1.7	1	23	218	240	218	240	0.99
5	9	2e-05	0.0015	19.3	1.7	2	23	424	445	423	445	0.96
6	9	2.6e-09	2e-07	31.5	1.6	1	23	451	473	451	473	0.98
7	9	0.0022	0.17	12.9	0.6	3	23	481	501	479	501	0.97
8	9	5.7e-05	0.0043	17.9	1.5	1	23	507	529	507	529	0.99
9	9	0.017	1.3	10.1	0.8	1	23	535	559	535	559	0.95

Sequence Information

Coding Sequence: ATGCAATTGTACGAATCGATTTTTGTGGCTCGAGTTTTTAAAAGATTTTATCAAACCTACACGACCGCCCCGTACGTCCTCTACAAGGATGGAGTGGAGCGCGCCCCGCCAGGCACGCAGTGGGGCGGCGCGGACCATCTCGATCGCACCCCGTGCTTCGTCCCCCAGCCGGAGCTGCAGCAGCAGTATACCCCGTACTTCAAGGACACCAGACCCGCGAGTCACATGCTCGGAACGGGCGGCTTTCCGCTCCATTATCTAAAACAGAACGGCGGAGTTCTATCACTCGAGGGCCCGCTAGACCAGTACGCCACTCCCGATTTGCGGCACCTACCGGATATCGTGCAAGCGGAGCCTCCGAAGCCCCGAAAACACAATCCCAACTCCGAGCTCCGCCTGTTCAAATGCCTGACGTGCGGCAAAGACTTCAAACAGAAGTCGACGCTGCTGCAGCACGAGCGCATCCACACCGACTCGCGGCCGTACGGGTGCCCGGAGTGCGGCAAGCGGTTCCGCCAGCAGTCCCACCTGACGCAGCACCTTCGCATCCACGCCAACGAGAAACCGTACGCGTGCGTGTACTGCCCGCGCTCCTTCCGCCAGCGGGCCATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCCCCGGCCAGCTCCCCGCACGCGCCGCCCGCACTGACCCGAAGCGATCGCGTCAATGCCGGCGCCGCCTGCGATCCCCGCCTACCTTCACCCGTTCGATTCGGTCTCGCATCCATTGGCCTTCCTATCAGTCAAATTCTCGGTCCCCTCGTCGCCCGCCTAGCGGAGCGCGCTCGCGAGACGCGGAACCGATCGCCGGACGCTCCTGTAACCGTCCCCAACGTTTCCCCGCATCTTATCTTCAAGAACGGGACGACGCCGACGTTGTGGCCACAAGATGTACCGTTCCCGCCGGACGAAAACAAGGAGGAGATACAGTCGACCTTCGGGGACGCAGACGGCCAGAACGGGGAGCAGCGCGGGTCATGTTTTTCGCCGGGCGATACGGCTCAGTATCCAGCATACTTTAAAGACACGAAGGGTCTGAATCACACAGTTTTCAGCTCCGGATTGTCCCTTCAATATCTGAAGGGCGGGAAACTTCCGGACGTCCTGGGCGGACGCGCGATGCCGCTGTACGTGCGGTGTCCCATTTGCCAGAAGGAGTTCAAGCAGAAGTCCACTCTCCTGCAGCACGGCTGCATCCACATCGAGTCGAGGCCCTACCCGTGCCCGGAGTGCGGCAAGCGCTTCCGACAGCAGTCGCATCTCACGCAACACCTGCGCATTCACACCAACGAGAAGCCCTACGGGTGCGTATACTGCCCGCGATTCTTCCGCCAGCGGACGATCCTCAACCAGCACCTCCGCATTCACACCGGAGAGAAGCCGTACAAGTGCACGCAGTGCGGAAAAGACTTCAGGCAGAAGGCCATCCTGGACCAGCACACGCGGACGCACCAGGGCGACCGGCCGTTCTGCTGCCCGATGCCGAACTGCCGGCGGCGCTTCGCGACGGAGCCGGAGGTGAAGAAGCACATCGACAACCACATGAACCCGCACGCGGCCAAGGCCCGGCGCGCCGATGCCAAGACGCCGCGCCCGCTGCCGCCCGCGTCCGCCGTGGTCAAGCCCGAGCTGTACTTCCCGCAGTGCTACGCGCCGCCCTTCCAGCAGTTCGGCGGCGGGCCGGAGTTCAAGCCGGCGGTAGGGGCGGGCGGCGCCTGTCTGCCCGCGCAGTGA
Protein Sequence: MQLYESIFVARVFKRFYQTYTTAPYVLYKDGVERAPPGTQWGGADHLDRTPCFVPQPELQQQYTPYFKDTRPASHMLGTGGFPLHYLKQNGGVLSLEGPLDQYATPDLRHLPDIVQAEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPASSPHAPPALTRSDRVNAGAACDPRLPSPVRFGLASIGLPISQILGPLVARLAERARETRNRSPDAPVTVPNVSPHLIFKNGTTPTLWPQDVPFPPDENKEEIQSTFGDADGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHTVFSSGLSLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADAKTPRPLPPASAVVKPELYFPQCYAPPFQQFGGGPEFKPAVGAGGACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078408;
90% Identity: iTF_00673685;
80% Identity: -