Ebal022666.1
Basic Information
- Insect
- Episyrphus balteatus
- Gene Symbol
- -
- Assembly
- GCA_026256485.1
- Location
- JAGTYB010000036.1:3001610-3007651[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.7e-14 6.3e-11 42.6 0.0 3 43 293 333 291 335 0.91 2 3 0.012 21 5.8 0.0 27 37 364 374 355 379 0.87 3 3 1.4e-15 2.4e-12 47.2 0.0 4 40 403 439 401 443 0.92
Sequence Information
- Coding Sequence
- ATGAATCATCTCAAATGGATGGGCCACACGGCAACCATCCTCGACATACAAAAGGCTCTCAAAAATGATCCAGCAACCTGTGACGTTACAATAACTTGCCGAGGCAAATCTGTGAAAGCCAATCGTTTTGTGCTATGCTCCTGCAGCGATCTATTGCGTGACATTCTAAATGATTTGCCTGTGGGACAGGAAGCCACCATAATAGTACCCGATATAAAAGGTTCACTTCTTGACAGTGTACTGAGCTTCGTTTATATGGGCGAGACGAGTTTGTCGTCGACTAATCTTTCCGACTTTCTCGAGGCTATTAATGTGCTGGGCATCAAGAGTGCCATTAGTTTTGAATGTGCAACCAGTTATTCTGCAAATAACGTGAAATCGGATATTCCCGAGATAGAAGAGGAACTTATGGAAGCTGAACCGGAGCAAGAAATAGTAGAGGATAAAGATGAAGAAGAGGACCCGCAAACATGTGCCGGTGATACAAGCGTGCGTGAGCTTGAATTTCTCGAAGTGTACAATGAACAAGACAAAATCAGCTATACCATCGAAAATATCACTCCAAACAATCCAAACGAATATATTTTAACAGAAAGCTCAGGTACATTTACTCTAACACCGAATATGAAAATCGATCCCGCCGAAGTGGGTACATTAGTTGAGAAGAACGATGAAGAAACTCAATTGATGGAACAATATGTAAATGATCCCATAGGTGACAGCAGTCATTGCTCAAGCACAGACCAAAAAGACGTCAAACCCAATAAAAAATTAAAAGATGAATTCAGTGAATTTCAAGGTCTAAGTCCGGAAGATCGTAAGGAAATATCAAGAGCTAGTTTACAAAACTTCAACGAAACCCAATCAGCAAGAGTGGAAGCATTAGAAAATGCTGTCTTGGCTGTTGTAGATGAAGGTATGAGCTTACAAAAAGCAGCAATAAAGTTTAACATATCTAAAACTGTTTTGTGGAGAAGAGTTAAAAAGCATCCGCTCTACATGAAAACCACTCGTGAGAATCCACTTATAACGGCAGCTTGTGAACGGCTCAAGAGTGGTGACTCTCTAAAAAGTATAAGCCAAGCCCTCGATATACCAATGTCAACTCTACATAGGCATAAAGTACGACTGGCTCAGGAAGGCAGGCTCCCCGACTATGTCACATTTAAGAAACGAGGCCCATTGTCAAAAGAAGTATTGAAAGCAAAACTTAACAAAGCAGTGACTGCTTGTTTGGGAAATGGAATGTCTCAAAATCATGCGGCAAATGTTTTCAATGTTCCAAAAAGTACACTTTGGAGACATTTACAGAAAAAAATCTGTCGTTCTGCTGATGATCCCAATAGTGTATGCATTAAAGAGGAAATAGTTTCGCCCGAGAATTGA
- Protein Sequence
- MNHLKWMGHTATILDIQKALKNDPATCDVTITCRGKSVKANRFVLCSCSDLLRDILNDLPVGQEATIIVPDIKGSLLDSVLSFVYMGETSLSSTNLSDFLEAINVLGIKSAISFECATSYSANNVKSDIPEIEEELMEAEPEQEIVEDKDEEEDPQTCAGDTSVRELEFLEVYNEQDKISYTIENITPNNPNEYILTESSGTFTLTPNMKIDPAEVGTLVEKNDEETQLMEQYVNDPIGDSSHCSSTDQKDVKPNKKLKDEFSEFQGLSPEDRKEISRASLQNFNETQSARVEALENAVLAVVDEGMSLQKAAIKFNISKTVLWRRVKKHPLYMKTTRENPLITAACERLKSGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPDYVTFKKRGPLSKEVLKAKLNKAVTACLGNGMSQNHAANVFNVPKSTLWRHLQKKICRSADDPNSVCIKEEIVSPEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00665862; iTF_01396682; iTF_00665008; iTF_01396409; iTF_00664763; iTF_01318152; iTF_00694507; iTF_00693683; iTF_00694835; iTF_01318394; iTF_00693980; iTF_00894113; iTF_00893774; iTF_00426260; iTF_00426521; iTF_00427428; iTF_00427043; iTF_00664236; iTF_00663977; iTF_00974557; iTF_00974900; iTF_00984399; iTF_00984143; iTF_00335222; iTF_00334897; iTF_01356765; iTF_01357185;
- 80% Identity
- iTF_00665862;