Eeuc019327.1
Basic Information
- Insect
- Epistrophella euchroma
- Gene Symbol
- -
- Assembly
- GCA_947049305.1
- Location
- CAMRIP010000176.1:765782-767276[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.5 1e+04 -2.9 0.0 27 38 277 288 277 290 0.84 2 4 4.7e-11 7.6e-08 32.8 0.0 3 43 295 335 293 337 0.90 3 4 0.013 21 5.8 0.0 27 37 366 376 357 381 0.87 4 4 7.7e-16 1.2e-12 48.1 0.0 4 41 405 442 403 446 0.92
Sequence Information
- Coding Sequence
- ATGAATCACCTTAAATGGATGGGCCACACGGCAACCATCCTCGACATACAAAAGGCACTTAAAAATGATCCAGCAACCTGTGACATTACGCTTACTTGCCGAGGTAAATCGGTGAAGGCTAATCGCTTTGTGCTATGCTCCTGCAGTGATCTATTGCGTGATATTCTAAATGATGTGCCTGTTGGTCAGGAAGCCACCATAATAGTACCCGATATTAAAGGTGCACTGCTCGACAGTGTATTAAGTTTCGTTTATATGGGCGAGACGAGTCTGTCATCATCGAATCTGTCTGACTTTCTCGAGGCCATTAATGTACTTGGCATTAAGAGTGCTATTAGTTTTGAATGTGCAACCAGTTATTCTTCTAGCAGCACCAAGAATGTTACAGAAATCGCAGAGATGGAAGAGGAACTTATGGAAGCTGAACCGGAGCAAGAAATACTTGAGGAGAAAGATGAAGAAGAGGACCAGCAAACATGTCCAGGTGACTCTAGCGTACGTGAACTTGAATTCCTTGAGGTGTACAATGAGCAAGATAAGATTAGTTACACCATCGAAAATATCGCCCCCAATAATCCAAATGAGTACATTTTAACTGAAAGTTCTGGCACATTTACTTTGACACCTAATATGAAAATAGATCCGAGCGAAGTTGGCGCGTTAGTTGAAAAGACCGAGGAAGAAACCCATTTAATAGAACAATATGTAAATGATCCCATAGGTGAGAGCAGTCATTGTTCGAGCACAGACCAAAAAGACATCAAACCcaataagaaattaaaagatGAATTTAGTGAATTTCAGGGACTAAGTCCAGAGGAACGTAAAGATATATCTAGAGCCAGCTTACAAAACTTCAACGAAACGCAATCGGCTCGTGTGGAAGCACTAGAGAATGCAGTCTTAGCTGTAGTAGATGAGGGCAAGAGTTTACAGAAAGCTGCCATAATGTTTAACATATCAAAAACGGTTCTGTGGAGAAGAGTGAAAAAGCATCCCCTCTATATGAAAACTACTCGCGAGAACCCATTAATAACGGCAGCTTGTGAACGCCTCAAAAGTGGAGACTCACTAAAAAGTATAAGTCAAGCACTCGATATACCAATGTCGACACTACATCGACACAAAGTGAGACTAGCACAGGAAGGCAGGCTACCCGACTATGTCACTTTTAAGAAACGAGGCCCATTGTCAAAAGAAGTACTCAAAGCAAAACTTAACAAGGCAGTGAGTGCTTGTTTGGGAAATGGAATGTCACAAAATCATGCGGCAAATGTGTTTAATGTTCCAAAGAGCACGCTTTGgagacatttacaaaaaaaaatgtgtagctCGACCGATGACTCGAACACTGTATGCATAAAAGAGGAAATTGTTTCGCCAgagaattga
- Protein Sequence
- MNHLKWMGHTATILDIQKALKNDPATCDITLTCRGKSVKANRFVLCSCSDLLRDILNDVPVGQEATIIVPDIKGALLDSVLSFVYMGETSLSSSNLSDFLEAINVLGIKSAISFECATSYSSSSTKNVTEIAEMEEELMEAEPEQEILEEKDEEEDQQTCPGDSSVRELEFLEVYNEQDKISYTIENIAPNNPNEYILTESSGTFTLTPNMKIDPSEVGALVEKTEEETHLIEQYVNDPIGESSHCSSTDQKDIKPNKKLKDEFSEFQGLSPEERKDISRASLQNFNETQSARVEALENAVLAVVDEGKSLQKAAIMFNISKTVLWRRVKKHPLYMKTTRENPLITAACERLKSGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPDYVTFKKRGPLSKEVLKAKLNKAVSACLGNGMSQNHAANVFNVPKSTLWRHLQKKMCSSTDDSNTVCIKEEIVSPEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00665554;
- 80% Identity
- iTF_00665008;