Eeli008032.1
Basic Information
- Insect
- Epistrophe eligans
- Gene Symbol
- -
- Assembly
- GCA_951394125.1
- Location
- OX596029.1:20069725-20071290[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.5e-11 6.2e-08 32.8 0.0 3 43 295 335 293 337 0.90 2 3 0.012 17 5.8 0.0 27 37 366 376 357 381 0.87 3 3 7.3e-16 1e-12 48.1 0.0 4 41 405 442 403 446 0.92
Sequence Information
- Coding Sequence
- ATGAATCACCTTAAATGGATGGGCCACACGGCAACCATCCTCGACATACAAAAGGCACTCAAAAATGATCCAGCAACCTGTGACATTACACTTACTTGCCGAGGCAAATCGGTGAGGGCTAATCGTTTTGTGTTATGCTCTTGCAGTGATCTATTGCGTGACATTCTAAATGATGTGCCTGTTGGACAGGAAGCCACCATAATAGTACCCGATATTAAAGGTGCACTGCTCGACAGTGTATTAAGTTTCGTTTATATGGGCGAGACGAGTCTTTCATCAACAAATTTGTCGGACTTTCTCGAGGCCATTAATGTACTTGGAATCAAGAGTGCCATTAGTTTTGAATGTGCGACCAGTTATTCTTCTACGAACACCAAGAATGTTACAGAAATCGCCGAGATGGAAGAGGAATTAATGGAAGCTGAACCTGAGCAAGAAATAGTTGAGGAGAAAGATGAAGAAGAGgACCAGCAAACATGTGCAGGTGATTCTAGTGTGCGTGAGCTTGAATTCCTTGAGGTGTATAATGAACAAGATAAGATTAGCTATACCATCGAAAATATCGCCCCAAACAATCCAAATGAATACATTTTAACTGAAAGTTCTGGCACATTTACTTTGACACCGAATATGAAAATAGATCCAAACGAAGTGGGTGCATTGGTTGAAAAGACCGAAGAAGAAACCCATTTGATGGATCAATATGTAAATGATCCAATAGGTGACAGCAGTCATTGTTCGAGCACAGACCAGAAAGACCTTAAACCCAATAAGAAATTAAAGGATGAATTTAGTGAATTTCAGGAACTAAGTCCAGAGGAACGTAAGGAAATTTCAAGAGCCAGCTTACAAAACTTCAACGAAACGCAATCGGCCCGAGTGGAAGCACTAGAAAATGCAGTCTTAGCTGTAGTAGATGAAGGCAAAAGTTTGCAGAAAGCTGCCATAATGTTTAACATATCGAAAACGGTTCTGTGGAGAAGAGTGAAAAAACATCCCCTTTATATGAAAACTACTCGCGAGAATCCACTTATAACGGCAGCATGTGAACGCCTCAAGAGTGGTGACTCACTTAAAAGTATAAGTCAAGCACTTGATATACCAATGTCGACACTTCATCGACACAAAGTCAGACTAGCACAAGAAGGCAGGCTACCCGAATatgtaacttttaaaaaacGAGGCCCATTGTCAAAAGAAGTACTTAAAGCAAAACTTAACAAGGCAGTGAGTGCTTGTTTGGGGAACGGTATGTCACAAAATCATGCGGCGAATGTGTTCAATGTTCCAAAGAGTACGCTTTGGAGacatttacagaaaaaaatgtgtagctCGACAGAAGACCCGAACAGTGTATGCATTAAAGAGGAAATTGTTTCACCAgagaattga
- Protein Sequence
- MNHLKWMGHTATILDIQKALKNDPATCDITLTCRGKSVRANRFVLCSCSDLLRDILNDVPVGQEATIIVPDIKGALLDSVLSFVYMGETSLSSTNLSDFLEAINVLGIKSAISFECATSYSSTNTKNVTEIAEMEEELMEAEPEQEIVEEKDEEEDQQTCAGDSSVRELEFLEVYNEQDKISYTIENIAPNNPNEYILTESSGTFTLTPNMKIDPNEVGALVEKTEEETHLMDQYVNDPIGDSSHCSSTDQKDLKPNKKLKDEFSEFQELSPEERKEISRASLQNFNETQSARVEALENAVLAVVDEGKSLQKAAIMFNISKTVLWRRVKKHPLYMKTTRENPLITAACERLKSGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPEYVTFKKRGPLSKEVLKAKLNKAVSACLGNGMSQNHAANVFNVPKSTLWRHLQKKMCSSTEDPNSVCIKEEIVSPEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00665554;
- 80% Identity
- iTF_00664236;