Elun029625.1
Basic Information
- Insect
- Eupeodes luniger
- Gene Symbol
- -
- Assembly
- GCA_951509635.1
- Location
- OX608074.1:18128662-18130147[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-10 1.3e-07 32.7 0.0 3 43 297 337 295 339 0.90 2 3 0.043 35 5.7 0.0 27 37 368 378 359 383 0.87 3 3 2.6e-15 2.1e-12 48.1 0.0 4 41 407 444 405 448 0.92
Sequence Information
- Coding Sequence
- ATGAATCACCTTAAATGGATGGGCCACACGGCAACCATCCTCGACATACAAAAGGCACTAAAAAATGACCCAGCAACCTGTGACATTACGCTTACCTGTCGAGGAAAATCGGTGAAGGCTAATCGCTTCGTGTTATGTTCCTGCAGTGATCTGCTACGAGACATTCTAAATGATGTCCCAGTTGGACAGGAAGCGACGATAATAGTGCCAGATATCAAAGGTACATTGCTCGACAGTGTCTTGAGTTTCGTTTATATGGGAGAAACGAGTCTTTCGTCGACTAACCTGTCGGATTTTCTCGAAGCTATCAACGTACTGGGAATTAAGAGTGCTATAAGTTTTGAATGTGCCACCAGTTATTCCTCTACCAACATCAAGAATGTCCCAGAAATCACCGAGATGGAAGAGGAACTTATGGAAGCAGAACCGGAGCAAGAAATTGtcgaggagaaagatgaagaagaggaCCAACAAACATGCCCAGGCGATACCAATGTGCGTGATCTCGAATTTCTTGAGGTATACAACGAACAAGACAAGATTAGTTACACTATCGAAAATATCACCCCAAACAATCCAAATGAATACATTTTAACCGAAAGTTCAGGAACGTTTACTCTGACCCCCAATATGAAGATAGAATCGACAGGAGTGGAAGCATTGGTGGACAAGACTGATGAAGAAACTCATTTGATGGAACAATATGTAAACGACCCCATAGGCGATAGCAGCCACTGTTCAAGTGCAGACCAGAGCCAAAAGGAAACCAAACccaataagaaattaaaagacGAATTTAGTGAATTTCAAGGACTAAGCCCCGATGAACGTAAAGACATATCTAGAGCCAGTTTACAAAACTTCAACGAAACACAATCGGCCAGAGTCGAAGCACTAGAGAATGCAGTCTTAGCTGTGGTAGATGAGGGCAAGAGTTTGCAGAAAGCTGCTATAATGTTCAACATATCCAAAACAGTTCTGTGGCGAAgagtaaaaaaacaccctctctATATGAAAACAACTCGCGAGAATCCACTCATAACGGCAGCATGTGAACGACTCAAGAGTGGAGACTCACTGAAAAGTATCAGTCAAGCACTCGATATTCCAATGTCGACTCTCCATCGACACAAAGTGAGACTGGCACAGGAAGGCAGGCTACCCGACTATGTCACTTTTAAGAAACGCGGTCCATTATCTAAAGAAGTACTCAAAGCTAAACTAAACAAGGCTGTGAGTGCTTGTTTGGGTAATGGAATGTCTCAGAACCATGCAGCGAATGTGTTCAATGTTCCAAAGAGCACACTTTGGAGAcatttacaaaagaaaatgtGTAGCTCCACAGATGATCCGAATAGTGTGTGTATTAAGGAAGAAATTATATCgccagaaaattaa
- Protein Sequence
- MNHLKWMGHTATILDIQKALKNDPATCDITLTCRGKSVKANRFVLCSCSDLLRDILNDVPVGQEATIIVPDIKGTLLDSVLSFVYMGETSLSSTNLSDFLEAINVLGIKSAISFECATSYSSTNIKNVPEITEMEEELMEAEPEQEIVEEKDEEEDQQTCPGDTNVRDLEFLEVYNEQDKISYTIENITPNNPNEYILTESSGTFTLTPNMKIESTGVEALVDKTDEETHLMEQYVNDPIGDSSHCSSADQSQKETKPNKKLKDEFSEFQGLSPDERKDISRASLQNFNETQSARVEALENAVLAVVDEGKSLQKAAIMFNISKTVLWRRVKKHPLYMKTTRENPLITAACERLKSGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPDYVTFKKRGPLSKEVLKAKLNKAVSACLGNGMSQNHAANVFNVPKSTLWRHLQKKMCSSTDDPNSVCIKEEIISPEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00665554;
- 80% Identity
- iTF_00694835;