Basic Information

Insect: Eupeodes corollae
Gene Symbol: -
Assembly: GCA_945859775.1
Location: CAMAOS010000483.1:358122-359607[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.8e-10 7.7e-08 32.7 0.0 3 43 297 337 295 339 0.90

2 3 0.05 21 5.7 0.0 27 37 368 378 359 383 0.87

3 3 3e-15 1.3e-12 48.1 0.0 4 41 407 444 405 448 0.92

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.8e-10	7.7e-08	32.7	3	43	297	337	295	339	0.90
2	3	0.05	21	5.7	27	37	368	378	359	383	0.87
3	3	3e-15	1.3e-12	48.1	4	41	407	444	405	448	0.92

Sequence Information

Coding Sequence: ATGAATCACCTTAAATGGATGGGCCACACGGCAACCATCCTCGACATACAAAAGGCACTAAAAAATGACCCAGCAACCTGTGACATTACGCTTACTTGTCGAGGAAAATCGGTGAAGGCTAATCGCTTCGTGTTATGTTCCTGCAGTGATCTGCTACGAGACATTCTAAATGATGTCCCTGTTGGACAGGAAGCGACGATAATAGTGCCAGATATCAAAGGTACATTGCTCGACAGTGTCTTGAGCTTCGTTTATATGGGAGAAACGAGTCTTTCGTCGACTAACCTGTCGGATTTCCTCGAAGCTATCAACGTACTGGGAATTAAGAGTGCTATAAGTTTTGAATGTGCCACCAGTTATTCCTCTACCAACATCAAGAATGTCCCAGAAATCACCGAGATGGAAGAGGAACTTATGGAAGCAGAACCGGAGCAAGAAATTGTCGAGGAGAAAGATGAAGAAGAGGACCAACAAACATGCCCAAGCGATACTAATGTGCGTGATCTCGAATTTCTTGAGGTATACAACGAACAAGACAAGATTAGTTACACTATCGAAAATATCACCCCAAATAATCCAAATGAATACATTTTAACCGAAAGTTCAGGAACGTTTACTCTGACCCCCAATATGAAGATAGAATCAACTGCAGTGGGAGCATTGGTGGACAAGGCTGATGAAGAAACTCACTTGATGGAACAATATGTAAACGACCCCATAGGCGATAGCAGCCACTGTTCAAGTGCAGACCAGAGCCAAAAGGAAACCAAACCCAATAAGAAATTAAAAGACGAATTTAGTGAATTTCAAGGACTTAGCCCCGATGAACGCAAAGACATATCTAGAGCCAGTTTACAAAACTTCAACGAAACACAATCGGCAAGAGTCGAAGCACTAGAGAATGCAGTCTTAGCTGTGGTAGATGAGGGCAAGAGTTTGCAAAAAGCTGCTATAATGTTTAACATATCCAAAACAGTTCTGTGGCGAAGAGTAAAAAAACACCCCCTATATATGAAAACAACTCGCGAGAATCCACTCATAACGGCAGCATGTGAACGACTCAAGAGTGGAGACTCACTGAAAAGTATCAGCCAAGCACTTGATATTCCAATGTCGACTCTCCATCGACACAAAGTGAGACTGGCACAGGAAGGCAGGCTACCCGACTATGTCACTTTTAAGAAACGCGGTCCATTATCTAAGGAAGTCCTCAAAGCTAAACTAAACAAGGCAGTAAGTGCTTGTTTGGGTAATGGAATGTCTCAGAATCATGCAGCAAATGTGTTCAATGTTCCAAAGAGCACACTTTGGAGACATCTACAAAAGAAAATGTGTAGCTCCACAGATGATCCGAATAGTGTGTGTATTAAGGAAGAAATTATATCGCCAGAGAACTAA
Protein Sequence: MNHLKWMGHTATILDIQKALKNDPATCDITLTCRGKSVKANRFVLCSCSDLLRDILNDVPVGQEATIIVPDIKGTLLDSVLSFVYMGETSLSSTNLSDFLEAINVLGIKSAISFECATSYSSTNIKNVPEITEMEEELMEAEPEQEIVEEKDEEEDQQTCPSDTNVRDLEFLEVYNEQDKISYTIENITPNNPNEYILTESSGTFTLTPNMKIESTAVGALVDKADEETHLMEQYVNDPIGDSSHCSSADQSQKETKPNKKLKDEFSEFQGLSPDERKDISRASLQNFNETQSARVEALENAVLAVVDEGKSLQKAAIMFNISKTVLWRRVKKHPLYMKTTRENPLITAACERLKSGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPDYVTFKKRGPLSKEVLKAKLNKAVSACLGNGMSQNHAANVFNVPKSTLWRHLQKKMCSSTDDPNSVCIKEEIISPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00311727;
90% Identity: iTF_00665554;
80% Identity: iTF_00693980;