Cfes050419.1
Basic Information
- Insect
- Chrysotoxum festivum
- Gene Symbol
- -
- Assembly
- GCA_963931855.1
- Location
- OZ007556.1:181280589-181283341[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-10 1.5e-07 32.8 0.0 3 43 294 334 292 336 0.90 2 3 0.057 41 5.8 0.0 27 37 365 375 356 380 0.87 3 3 3.4e-15 2.4e-12 48.1 0.0 4 41 404 441 402 445 0.92
Sequence Information
- Coding Sequence
- ATGAATCACCTTAAATGGATGGGCCACACGGCAACTATCCTCGACATACAAAAGGCACTCAAAAACGATCCAGCGACCTGTGACATTACACTTACTTGCCGAGGCAAATCGGTGAAGGCTAATCGCTTTGTGTTATGCTCCTGTAGTGATCTATTGCGTGACATTCTCAATGATGTGCCTGTGGGACAGGAAGCCACCATAATAGTACCCGATATTAAAGGTGCACTGCTCGACAGTGTATTGAGTTTCGTTTATATGGGCGAGACGAGTCTTTCGTCGTCAAATCTTTCGGACTTTCTCGAGGCCATTAATGTTTTGGGAATCAAGAGTGCCATTAGTTTTGAATGTGCGACCAGTTATTCTGCTAGCAGCGCCAAGAATGTAACAGAAATTCCCGACATAGAAGAGGAACTTATGGAAGCTGAACCGGAGCAGGAAATAGTCGAAAAGGATGAAGAAGAGgacCAGCAAACATGTACAGGGGATAGCAGCGTGCGTGAACTTGAATTCCTGGAGGTGTACAATGAACAAGATAAGATAAGTTACaccatagaaaatatagccCCAAACAATCCAAATGAATACATTTTAACCGAAAGTTCAGGGACATTTACTCTGACACCGAATATGAAAATAGATTCGGCTGAAGTTGGTACATTGGTTGAAAAGACGGACGAAGAAACCCATTTGATGGAACAATATGTAAATGATCCCATAGGTGACAGCAGTCATTGTTCGAGCACAGATCAAAAAGAcaacaaattgaataaaaatttaaaagatgaaTTTAGTGAATTTCAGGGACTAAGTCCGGAGGAACGTAAAGAAATATCTCGAGCCAGCTTACAAAACTTCAATGAAACCCAATCGGCACGAGTGGAAGCACTAGAAAATGCAGTTTTAGCTGTGGTAGATGAGGGCAAAAGTTTACAGAAAGCCGCCATAATGTTTAACATATCCAAAACGGTACTATGGAGAAGAGTTAAAAAACATCCGCTTTATATGAAAACGACTCGTGAGAATCCACTTATAACAGCAGCATGTGAACGCCTCAAGAATGGAGACTCACTTAAGAGTATCAGTCAAGCACTCGATATACCAATGTCAACACTGCATCGACACAAAGTGAGACTGGCACAGGAAGGCAGGCTACCCGACTATGTCACTTTCAAGAAACGAGGCCCATTATCCAAAGAAGTACTCAAAGCAAAACTTAACAAGGCAGTGAGTGCTTGTTTGGGAAACGGAATGTCTCAGAATCATGCGGCGAACGTATTCAATGTTCCTAAGAGTACGCTTTGGagacatttacaaaaaaaaatgtgtagctcACCAGATGACAGTGTATGCATTAAAGAGGAAATTGTTTCGCCAGAGAATTAA
- Protein Sequence
- MNHLKWMGHTATILDIQKALKNDPATCDITLTCRGKSVKANRFVLCSCSDLLRDILNDVPVGQEATIIVPDIKGALLDSVLSFVYMGETSLSSSNLSDFLEAINVLGIKSAISFECATSYSASSAKNVTEIPDIEEELMEAEPEQEIVEKDEEEDQQTCTGDSSVRELEFLEVYNEQDKISYTIENIAPNNPNEYILTESSGTFTLTPNMKIDSAEVGTLVEKTDEETHLMEQYVNDPIGDSSHCSSTDQKDNKLNKNLKDEFSEFQGLSPEERKEISRASLQNFNETQSARVEALENAVLAVVDEGKSLQKAAIMFNISKTVLWRRVKKHPLYMKTTRENPLITAACERLKNGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPDYVTFKKRGPLSKEVLKAKLNKAVSACLGNGMSQNHAANVFNVPKSTLWRHLQKKMCSSPDDSVCIKEEIVSPEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00665554;
- 80% Identity
- iTF_00335222;