Maur021697.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- -
- Assembly
- GCA_948107695.1
- Location
- OX403617.1:70116660-70118583[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.1e-14 4.6e-11 42.6 0.0 3 43 296 336 294 338 0.91 2 3 0.017 15 5.8 0.0 27 37 367 377 358 382 0.87 3 3 1.7e-15 1.5e-12 47.4 0.0 4 41 406 443 404 447 0.91
Sequence Information
- Coding Sequence
- ATGAATCATCTCAAATGGATGGGCCACACTTCAACTATCCTCGACATACAAAAGGCACTCAAAAACGATCCAGCAACCTGTGACGTTACAATAACATGTCGAGGCAAATCTGTAAAGGCCAATCGCTTTGTACTATGCTCCTGCAGCGACCTATTGCGTGACATTCTCAATGATTTGCCCGTTGGACAGGAAGCTACCATTATAGTGCCCGACATAAAGGGTTCTCTTCTCGATAGTGTATTGAGTTTCGTTTATATGGGCGAGACGAGTCTATCGTCAACAAACCTTTCTGACTTTCTTGAGGCAATTAATGTGCTGGGCATTAAGAGTGCCATTAGTTTTGAATGTGCAACCAGCTATTCTGGTGGTAGCAACATCAAGAATGTTACGGACATTCCTGAGATAGAAGAGGAACTTATGGAAGCCGAACCGGAGCAAGAGATAGCAGAGGAAAAAGATGAAGAAGAGGAACCACAAACATGTCCAGGCAATACTAGTGTACGTGAGCTGGAATTCCTTGAGGTATACAATGAACAAGACAAAATCAGCTATACCATCGAAAATATCACTCCAAACAATCCAAACGAATACATTTTGACAGAAAGCTCAGGTACATTTACTCTGACACCGAATATGAAAATAGATCCCGCCGAAGTGGGAACATTGGTTGAGAAAAACGACGAAGAAGCTCACTTAATGGAACAATATGTAAATGATCCCATCGGTGACAGCAGTCATTGTTCGAGCACAGACCAAAAAGACATCAAACCCAGTAAAAAATTAAAAGACGAATTTAGTGAATTTCAAGGGCTAAGTCCAGAAGATCGCAAAGAAATATCAAGAGTCAGCTTACAAAATTTCAATGAAACCCAGTCTGCACGAGTGGAAGCATTAGAAAATGCCGTCTTAGCTGTCGTCGATGAAGGCATGAGCTTACAAAAAGCAGCCATTAAATTTAACATATCTAAAACAGTTTTGTGGAGAAGAGTTAAAAAACATCCACTTTATATGAAAACCGCTCGCGAGAATCCACTTATAACTGCAGCATGTGAACGGCTAAAGAGTGGCGACTCTTTAAAAAGTATAAGCCAAGCCCTTGATATACCAATGTCAACTCTGCATCGACATAAAGTACGATTAGCCCAGGAAGGCAGACTACCTGACTATGTCACATTTAAAAAACGAGGCCCATTGTCAAAGGAAGTATTGAAAGCAAAACTTAACAAAGCAGTGACTGCTTGCTTGGGAAACGGAATGTCTCAAAATCATGCGGCGAATGTATTCAATGTTCCAAAGAGTACACTGTGGAGACATTTGCAGAAAAAAATCTGTCGCTCTACAGATGACCCGAACGGTGTATGCATTAAAGAGGAAATAGTTACGCCTGAGAATTGA
- Protein Sequence
- MNHLKWMGHTSTILDIQKALKNDPATCDVTITCRGKSVKANRFVLCSCSDLLRDILNDLPVGQEATIIVPDIKGSLLDSVLSFVYMGETSLSSTNLSDFLEAINVLGIKSAISFECATSYSGGSNIKNVTDIPEIEEELMEAEPEQEIAEEKDEEEEPQTCPGNTSVRELEFLEVYNEQDKISYTIENITPNNPNEYILTESSGTFTLTPNMKIDPAEVGTLVEKNDEEAHLMEQYVNDPIGDSSHCSSTDQKDIKPSKKLKDEFSEFQGLSPEDRKEISRVSLQNFNETQSARVEALENAVLAVVDEGMSLQKAAIKFNISKTVLWRRVKKHPLYMKTARENPLITAACERLKSGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPDYVTFKKRGPLSKEVLKAKLNKAVTACLGNGMSQNHAANVFNVPKSTLWRHLQKKICRSTDDPNGVCIKEEIVTPEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00665554;
- 80% Identity
- iTF_00984399;