Eeli012976.1
Basic Information
- Insect
- Epistrophe eligans
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951394125.1
- Location
- OX596029.1:108650525-108668710[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-114 1.2e-109 366.7 32.3 1 299 220 510 220 511 0.94 2 2 0.23 3e+03 -2.3 4.4 221 244 540 563 515 585 0.46
Sequence Information
- Coding Sequence
- ATGGTGCAACTAACCCTTGATAGCCGGCTTATTGGAAAGTTTGCCAAACAATGGGGTCCATCGCTAAGCGACTGCCTGGAAATACACGCTTCTATTAAAACGGGTGTAGCCAACAAGGGAACCTGGAAATCCGTAATAACTGTGTCTGATGACAATATGTCAGAAGTGATAAAACAATCTAATGGATTGATCTATGATCAACACAACAATGaggagaataataataataatagtttaagAAAAGCCGACGATTATGACGAAATCGGCGAAGAATTCGATTTCAGTGATAGTGAATTAAATGATGACAACATCAGTAATGTCAAacctaataataaaatgaattcgaATGACGTTTGTAACGTCACAGTGAATAATGGTGTTACCATTGTTGATATTGGTTCGTCAGAACCCTTAAACATAAATCTAGATCAGTCGAAAGAAGTCCAAATGGATGCGTTCTGTCCAATAACTCCGAGTAAAATTTTCGATTGTGAAGAGAGTAATAAACCTACCACCGGCACTGGTAAGAACACTTCAAACGGACATAACAGTGAGTTCAGTGGTAAATTGGAAAACGGTGGCGATGACGATGATGtagcagaagaagaagaagatgacgAATTGATTGTACAATTTTTAGGACAAGCTAATCAAATTGCTGAAGCCAGACTGGCAGCCAGACGGCAGGCACGTGCCGAAGCACGGGAAATTCGCATGCGCGAATTGGAACGCCAGCAAAAAGAACTGGAACAAAATGCTGATCGAGTATTCGATATGCAAACAGCAGCCGGCATTGATCCTCTGGCTAGATCGCGTCTCAACGCATCCAGTGTCACCGGAGTGGTTAATTCGGTGCGTGCCAGTTCTATGTCCTCCCGCAGAAGTAGTGAAGATTCCTTGGAAGAGGAAGGACGCAGTTTACGTGATATAAGGCATGAACTGAAGGATGTGGAGGAACGTTTTCGAAAAGCAATGATAGCCAATGCACAGCTAGACAATGAACGGGCCTCACAATCTTATCAAATTCAATTGCTCAAGGATAAACTGGAAGAAATGGAAGAATCCTTTTCCCAGCTACAGCGTGAATTCAAAGAGAAAACACGTGAATGTAATGCTTTCAAGCGTAACCTTGACAAATTGACAGAAGAACTGAAGCTTGTCCATGGCCAGCTGACTGAACGAGATGCGCTTATTGCCGAGCAGGGTTTAGTCATTGTAGCTGTCGAAAACGAGGATGGCTCTGATGCAAAACGTGCTCTAGTCACTTTAGAAAATGCACAATTGTTAGGATCTGTTCAAGGTTCTCTAGacgTTCGACTCAAAAAATTCAGCGAGGAAAAAATTCAACTTCAGGCCGAAGTGCAAAACTTACAGGACCAATTAGAAAATGTCAAGACCCAGGGACGAGGACGAGGCAATTCAATGAATGGCACCCTTGGTACTGATGAAGATTATGAGGCTCAAAgagaAGCCAACAAAATTATCTCTGACTACAAGTATAAATTGCAAAAAGCCGAACAAGAAATTGCTAGTCTACAAGCCAGCTTAGCTAGATCAGAGACACAAGTTATACGATATAAAAGTACAGCGGAAGCTGCTGAAAAAGCCGAGGCAGAGTTGAAAATCGAAAGGAGAAAACTCCAACGAGAGAACCGTGAAGCAATGGAACGACTAGAAGAACTAGAAACATCTAATAATCACCTTCTAAAGCGACTGGATAAATTAAAGAACGCCAAGAGTGCTCTTCTCAAAGAACTCTGA
- Protein Sequence
- MVQLTLDSRLIGKFAKQWGPSLSDCLEIHASIKTGVANKGTWKSVITVSDDNMSEVIKQSNGLIYDQHNNEENNNNNSLRKADDYDEIGEEFDFSDSELNDDNISNVKPNNKMNSNDVCNVTVNNGVTIVDIGSSEPLNINLDQSKEVQMDAFCPITPSKIFDCEESNKPTTGTGKNTSNGHNSEFSGKLENGGDDDDVAEEEEDDELIVQFLGQANQIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDMQTAAGIDPLARSRLNASSVTGVVNSVRASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESFSQLQREFKEKTRECNAFKRNLDKLTEELKLVHGQLTERDALIAEQGLVIVAVENEDGSDAKRALVTLENAQLLGSVQGSLDVRLKKFSEEKIQLQAEVQNLQDQLENVKTQGRGRGNSMNGTLGTDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00315970;
- 90% Identity
- iTF_00665633; iTF_00426338; iTF_00664834; iTF_01396516; iTF_01318246; iTF_00974664; iTF_00694635; iTF_00984235; iTF_00693838; iTF_00427151; iTF_00893880;
- 80% Identity
- -