Basic Information

Insect: Eupeodes luniger
Gene Symbol: lrrfip2
Assembly: GCA_951509635.1
Location: OX608074.1:141444976-141454366[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.7e-114 2.5e-109 366.8 32.7 1 299 173 463 173 464 0.93

2 2 0.1 5.7e+03 -2.1 4.4 221 244 493 516 468 538 0.45

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.7e-114	2.5e-109	366.8	32.7	1	299	173	463	173	464	0.93
2	2	0.1	5.7e+03	-2.1	4.4	221	244	493	516	468	538	0.45

Sequence Information

Coding Sequence: ATGTCAGAAGTGATAAAACAAACGAATGGTTTGATCTATGATCAAAACACAAATGaggagaataataataataataatagtttgaAAAAAGCCGAAGATTATGACGAAATTGGTGAAGAATTCGATTTCAGTGATAGTGAATTAATTGATGACAACATCAGTACTGTCAAATCTAATAATAACATAAATGACGTGAATGACGTTTTAAACGTCACAGTGAATAATGGTGTATCAATTGTTGATATCGGTCTGTCAAAACCCTCGAATCTTAATCTAGATCAATCGAAAGAAGTGCAAATGGATGCGATATGTCCCATGACACCTAGTAAAATCTTCGATTGTGAAGAGAGTAATAAGTCTTCAATCGACACCACCGGCAATAGTAAGAATATTCCAAACGGCCATAACAGTGCCGAAACGGAAGACGTCAACggcgacgactacgacgatgaTGTAGCCGAAGACGAAGAAGATGACGAATTGATTGTACAATTTTTAGGACAAGCTAATCAAATTGCTGAAGCAAGACTGGCAGCCAGACGGCAAGCACGTGCCGAAGCACGAGAAATTCGCATGCGCGAATTGGAGCGCCAGCAAAAAGAACTGGAGCAAAATGCTGATCGAGTATTTGATATGCAAACAGCAGCCGGCATTGATCCTCTGGCTAGATCGCGTCTCAACGCATCCAGTGTCACCGGAGTGGTTAATTCGGTACGTGCCAGTTCTATGTCCTCCCGCAGAAGTAGTGAAGATTCCCTGGAAGAGGAAGGACGTAGCTTACGTGATATTAGGCATGAACTCAAGGATGTCGAGGAACGTTTTCGAAAAGCAATGATAGCCAATGCACAACTAGACAATGAACGAGCCTCACAATCTTATCAAATTCAATTGCTTAAAGATAAACTGGAAGAAATGGAAGAATCCTTTTCCCAGTTACAGCGTGAATTTAAAGAGAAAACACGTGAATGTAACGCTTTTAAGCGTAACCTTGACAAATTGACAGAAGAACTGAAACTTGTTAATGGCCAGTTAACCGAACGGGATGCGCTAATTGCCGAGCAGGGTTTGGTTATTGTAGCTGTCGAAAATGAGGATGGCTCTGATGCCAAACGTGCTCTAGTCACTTTAGAAAATGCACAATTGTTAGGATCTGTTCAAGGTTCTCTTGATGTTCGACTTAAAAAATTTAGcgaagaaaaaattcaacttcAGGCTGAAGTGCAAAATTTACAGGACCAATTAGAAAATGTCAAGACCCAGGGACGAGGACGAGGTAATTCAATGAATGGCACCCTTGGCTCTGATGAGGATTATGAAGCTCAAAgaGAAGCCAATAAAATTATCTCTGACTACAAATATAAATTGCAAAAAGCCGAACAAGAAATTGCTAGTCTACAAGCCAGCTTAGCTAGATCAGAAACACAAGTTATACGATATAAAAGTACAGCGGAAGCTGCTGAAAAAGCCGAAGCAGAATTAAAAATCGAGAGGAGAAAACTCCAACGAGAGaaccGCGAAGCAATGGAACGACTAGAAGAACTAGAAACATCTAATAATCACCTTCTTAAGCGACTGGATAAATTAAAGAACGCCAAGAGTGCTCTTCTCAAAGAACTCTGA
Protein Sequence: MSEVIKQTNGLIYDQNTNEENNNNNNSLKKAEDYDEIGEEFDFSDSELIDDNISTVKSNNNINDVNDVLNVTVNNGVSIVDIGLSKPSNLNLDQSKEVQMDAICPMTPSKIFDCEESNKSSIDTTGNSKNIPNGHNSAETEDVNGDDYDDDVAEDEEDDELIVQFLGQANQIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDMQTAAGIDPLARSRLNASSVTGVVNSVRASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESFSQLQREFKEKTRECNAFKRNLDKLTEELKLVNGQLTERDALIAEQGLVIVAVENEDGSDAKRALVTLENAQLLGSVQGSLDVRLKKFSEEKIQLQAEVQNLQDQLENVKTQGRGRGNSMNGTLGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01356878;
90% Identity: iTF_00664072;
80% Identity: -