Maur017783.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_948107695.1
- Location
- OX403617.1:3001985-3012333[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-114 1e-109 366.9 32.4 1 299 178 468 178 469 0.93 2 2 0.11 2.5e+03 -2.2 4.4 221 244 498 521 473 543 0.45
Sequence Information
- Coding Sequence
- ATGTCAGAAGTGATAAATAAATCATCTAATGAATTGATCTATGATCAATACACAAATGAGGAGAATAATAATACAAATAAAAATAGTTTAAGAAAATCCGACGATTATGACGAAATCGGTGAAGAATTTGACTTCAGTGATAGTGAATTAAATGATGACAGTACTGTCACTATCAGTAGTGTCAAAACTGATAATAAAATGAATGTGAATGACGTTTGTGACGTCAAAGTGAATAATGGTGTTACTATTGTAGACATCGGTATGTCAAAACCTTCAGATCTAAATCTTGATCAATCGAAATCAGTCCAAATGGATGCGTTCTGTCCAATAACGCCGAGTAAGATTTTCGATTGTGAGGAGAATAATAAATACAACACCACTACCATCAACACCGGCACTGACAAGAACACTCCAAATGGACATCGCAGTGAATTCAGTGGTGAACTGGAAGACGACGACGATGATGATGCAGCAGCAGAAGAAGAAGATGACGAATTGATTGTACAATTTTTAGGACAAGCTAATCAAATTGCTGAAGCAAGACTGGCAGCCAGACGACAGGCACGTGCTGAAGCACGAGAAATTCGAATGCGCGAATTGGAACGCCAGCAAAAGGAACTGGAACAAAATGCTGATCGAGTTTTCGATATGCAAACAGCAGCCGGCATTGATCCATTGGCACGATCGCGCCTTAATGCATCCAGTGTCACCGGAGTGGTTAATTCGGTACGTGCCAGTTCCATGTCCTCCCGCAGAAGTAGTGAAGATTCCCTGGAAGAGGAAGGACGCAGCTTACGTGATATTAGGCATGAACTGAAGGATGTCGAGGAACGTTTTCGAAAAGCAATGATAGCCAATGCACAACTAGATAACGAACGGGCCTCTCAATCTTATCAAATTCAATTGCTTAAGGATAAACTGGAAGAAATGGAGGAATCCTTCTCTCAGTTGCAGCGTGAATTCAAAGAGAAAACACGCGAATGCAACGCTTTTAAGCGTAACCTTGACAAATTGACAGAAGAACTGAAGCTTGTCCATGGCCAGCTGACTGAACGAGATGCGCTTATTGCCGAGCAGGGTTTGGTCATTGTAGCTGTCGAAAACGAGGATGGCTCCGATGCCAAACGTGCTCTAGTCACTTTAGAAAATGCACAATTGTTAGGATCCGTTCAAGGTTCCTTAGACGTTCGACTCAAAAAATTCAGTGAAGAAAAAATTCAACTTCAGGCCGAAGTGCAAAATTTACAGGACCAATTAGAAAATGTCAAGACACAGGGACGAGGAAGGGGTAATTCAATGAATGGAACCCTTGGTTCCGATGAGGATTATGAAGCTCAGAGAGAAGCCAACAAAATCATCTCTGATTATAAATATAAATTGCAAAAAGCCGAACAAGAAATTGCTAGTCTACAAGCCAGCTTAGCTAGATCAGAAACACAAGTTATACGATATAAGAGTACAGCGGAAGCTGCTGAAAAAGCCGAAGCAGAGTTGAAAATCGAAAGGAGAAAACTCCAACGAGAGAACCGTGAAGCAATGGAACGACTGGAAGAACTAGAAACATCTAATAATCACCTTCTAAAACGACTGGATAAATTAAAGAATGCCAAGAGTGCTCTTCTCAAAGAACTCTGA
- Protein Sequence
- MSEVINKSSNELIYDQYTNEENNNTNKNSLRKSDDYDEIGEEFDFSDSELNDDSTVTISSVKTDNKMNVNDVCDVKVNNGVTIVDIGMSKPSDLNLDQSKSVQMDAFCPITPSKIFDCEENNKYNTTTINTGTDKNTPNGHRSEFSGELEDDDDDDAAAEEEDDELIVQFLGQANQIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDMQTAAGIDPLARSRLNASSVTGVVNSVRASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESFSQLQREFKEKTRECNAFKRNLDKLTEELKLVHGQLTERDALIAEQGLVIVAVENEDGSDAKRALVTLENAQLLGSVQGSLDVRLKKFSEEKIQLQAEVQNLQDQLENVKTQGRGRGNSMNGTLGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01356878;
- 90% Identity
- iTF_00664072;
- 80% Identity
- -