Eeuc006417.1
Basic Information
- Insect
- Epistrophella euchroma
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_947049305.1
- Location
- CAMRIP010000047.1:2989753-3006556[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-114 9.4e-110 367.4 32.0 1 299 170 460 170 461 0.93 2 2 0.1 3.3e+03 -2.1 4.4 221 244 490 513 465 535 0.45
Sequence Information
- Coding Sequence
- ATGTCAGAAGTGATAAAACAATCTAATGGATTGATCTATGATCAACACAACAATGAggagaataataataatagtttaaTAAAAGCCGAAGATTATGACGAAATCGGTGAGGAATTCGATTTCAGTGATAGTGAATTAAATGATGACAACATCAGTACTGTCAAacctaataataaaatgaaTGTGAATGACGTTAGTAACGTCACAGTGAATAATGGTGTTACCATTGTTGACATCGGTTTGTCAAAACCATCAAATCTAAATCTAGATCAGACGAAAGAAATTAAAATGGATGCGTTCTGTCCAATAACACCgagtaaaatttttgattgtgAGGAAAGTAATAAATCTACCATCGGTAATGGTAAGAAAACTTTAAACGGGCATAACAGTGAATTCAGTGGACAACTGGAAGACGGCGACGACGACAACGTCGACGACGATGATGTAGCAGAGGAAGAAGATGACCAATTGATTGTACAATTTTTAGGACAAGCTAATCAAATTgCTGAAGCAAGACTGGCAGCCAGGAGGCAGGCACGTGCTGAAGCACGGGAAATTCGCATGCGCGAATTGGAACGCCAGCAGAAAGAACTGGAACAAAATGCTGATCGAGTATTCGATATGCAAACAGCAGCCGGCATTGATCCCCTGGCCAGATCGCGTCTCAATGCATCCAGTGTCACCGGGGTGGTTAATTCGGTACGTGCCAGTTCAATGTCCTCCCGCAGAAGTAGTGAAGATTCCCTGGAAGAGGAAGGACGCAGTTTACGTGATATTAGGCATGAACTCAAGGATGTTGAGGAACGTTTTCGAAAAGCAATGATAGCCAATGCACAACTTGACAACGAACGAGCCTCACAATCTtatcaaattcaattgctcaAGGATAAACTTGAAGAAATGGAAGAATCTTTTTCCCAGCTACAGCGTGAATTCAAAGAGAAAACACGTGAATGTAATGCTTTTAAGCGCAACCTTGACAAATTAACAGAAGAACTGAAGCTTGTCCATGGCCAGCTGACTGAACGAGATGCGCTTATTGCCGAGCAGGGTTTGGTCATTGTAGCTGTCGAAAACGAGGATGGTTCTGATGCCAAACGTGCTCTAGTCACTTTAGAAAATGCACAATTATTAGGATCTGTTCAAGGTTCTCTAGATGTTCGACTTAAAAAGTTCAGcgaagaaaaaattcaacttcaggCCGAAGTGCAAAATTTACAGGACCAATTAGAAAATTTCAAGACACAGGGACGAGGACGAGGCAATTCAATGAATGGCACCCTTGGTTCTGATGAAGATTATGAAGCTCAAAgaGAAGCCAATAAAATCATCTCTGACTACAAATATAAATTGCAAAAAGCCGAACAAGAAATTGCTAGTCTTCAAGCCAGCTTAGCTAGATCAGAGACACAAGTTATACGGTATAAAAGTACAGCGGAAGCTGCTGAAAAAGCCGAAGCAGAGTTGAAAATTGAAAGGAGAAAACTCCAACGAGAGAACCGTGAAGCAATGGAACGACTAGAAGAACTAGAAACATCTAATAATCACCTTTTAAAGCGACTGGATAAATTAAAGAATGCCAAGAGTGCTCTTCTCAAAGAACTCTGA
- Protein Sequence
- MSEVIKQSNGLIYDQHNNEENNNNSLIKAEDYDEIGEEFDFSDSELNDDNISTVKPNNKMNVNDVSNVTVNNGVTIVDIGLSKPSNLNLDQTKEIKMDAFCPITPSKIFDCEESNKSTIGNGKKTLNGHNSEFSGQLEDGDDDNVDDDDVAEEEDDQLIVQFLGQANQIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDMQTAAGIDPLARSRLNASSVTGVVNSVRASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESFSQLQREFKEKTRECNAFKRNLDKLTEELKLVHGQLTERDALIAEQGLVIVAVENEDGSDAKRALVTLENAQLLGSVQGSLDVRLKKFSEEKIQLQAEVQNLQDQLENFKTQGRGRGNSMNGTLGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01356878;
- 90% Identity
- iTF_00664072;
- 80% Identity
- -