Ebal012410.1
Basic Information
- Insect
- Episyrphus balteatus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_026256485.1
- Location
- JAGTYB010000174.1:272692-289206[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.25 8.1e+03 -3.4 0.1 60 75 23 38 10 55 0.62 2 3 4.2e-114 1.3e-109 366.9 32.4 1 299 173 463 173 464 0.93 3 3 0.1 3.4e+03 -2.1 4.4 221 244 493 516 468 538 0.45
Sequence Information
- Coding Sequence
- ATGTCAGAATTGATAAATAAATCAACTAATGAATTGATCTATGATCAATACACAAATGAGGAGAATAATAATAATAATCATAAAAATAGTTTAAGAAAATCCTCCACCGACGATTATGATGAAATCGGTGAAGAATTCGATTTTAGTGATAGTGAATTAAATGATGACAGTTGTAATGTCAGTGTCAATAATTGTATTAAGTCTGATAACAAAATGAGTGTAAATGACGTTTGTGACGTCACTGTGAATAATGGTGTTACCATAGTAGACATTGGTATGTCTAAACCAACAGATCTAAATCTTGACCAATCGAAAACAGTTGAAATAGATGCGTTCTGTCCGATTACACCGAGTAAAATTTTCGATTGTGAGGAGAATAATAAATTTGACAACAGCACTGGTGAGAACACTCCGAATGGGCATCGCAGTGGCGAATTGGAAGACGACGATGATGATAATGAAGCAGAAGAAGATGACGAATTGATTGTACAATTTCTAGGACAAGCTAATCAAATTGCTGAAGCAAGACTGGCAGCTAGACGCCAGGCACGTGCTGAAGCACGAGAAATTCGCATGCGCGAATTGGAACGCCAGCAAAAGGAACTGGAACAAAATGCTGATCGAGTTTTCGATATGCAAACAGCAGCCGGCATTGATCCGCTGGCCAGATCGCGTCTCAATGCATCCAGTGTCACCGGTGTGGTTAATTCAGTACGTGCCAGTTCCATGTCCTCCCGCAGAAGTAGTGAAGATTCCTTGGAAGAGGAAGGACGCAGTTTACGTGATATTAGGCATGAACTCAAGGATGTCGAGGAACGTTTTCGAAAAGCAATGATAGCCAATGCACAATTAGATAACGAACGAGCCTCACAATCTTATCAAATTCAATTGCTCAAGGATAAACTGGAAGAAATGGAAGAATCCTTTTCACAGTTGCAGCGTGAATTTAAAGAGAAAACACGTGAATGCAATGCATTCAAGCGTAACCTTGACAAATTAACAGAAGAACTGAAGCTTGTCCATGGCCAGCTGACTGAACGTGATGCTTTAATTGCTGAGCAGGGTTTGGTCATTGTAGCTGTCGAAAATGAGGATGGCTCTGATGCCAAACGTGCTCTAGTCACTTTAGAAAATGCACAATTGTTAGGATCCGTTCAAGGTTCTTTAGATGTTCGACTTAAAAAATTCAGCGAAGAAAAAATTCAACTTCAAGCTGAAGTGCAAAATTTACAGGACCAATTAGAAAATGTCAAGACACAGGGACGAGGAAGGGGTAATTCAATGAATGGTACCCTTGGTTCCGATGAGGATTATGAAGCTCAAAGAGAAGCAAATAAAATCATCTCTGATTACAAATATAAATTGCAAAAAGCCGAACAAGAAATTGCTAGTCTACAAGCCAGCTTAGCTAGATCAGAAACACAAGTTATACGATATAAAAGTACAGCGGAAGCAGCTGAAAAAGCCGAAGCTGAGTTGAAAATCGAAAGGAGAAAACTCCAACGAGAAAACCGTGAAGCAATGGAACGACTAGAAGAATTAGAAACATCTAATAATCACCTTCTAAAACGACTGGATAAATTAAAGAATGCCAAGAGTGCTCTTCTCAAAGAACTCTGA
- Protein Sequence
- MSELINKSTNELIYDQYTNEENNNNNHKNSLRKSSTDDYDEIGEEFDFSDSELNDDSCNVSVNNCIKSDNKMSVNDVCDVTVNNGVTIVDIGMSKPTDLNLDQSKTVEIDAFCPITPSKIFDCEENNKFDNSTGENTPNGHRSGELEDDDDDNEAEEDDELIVQFLGQANQIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDMQTAAGIDPLARSRLNASSVTGVVNSVRASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESFSQLQREFKEKTRECNAFKRNLDKLTEELKLVHGQLTERDALIAEQGLVIVAVENEDGSDAKRALVTLENAQLLGSVQGSLDVRLKKFSEEKIQLQAEVQNLQDQLENVKTQGRGRGNSMNGTLGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01356878;
- 90% Identity
- iTF_00664072;
- 80% Identity
- -