Dsuz000367.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila suzukii
Gene Symbol
sip1
Assembly
GCA_013340165.1
Location
WWNF01000001.1:10310448-10313620[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-94 1.3e-90 303.6 14.1 5 275 416 681 412 681 0.97
2 2 0.065 5.2e+02 -0.1 0.1 157 199 693 732 686 736 0.69

Sequence Information

Coding Sequence
ATGTCGGACAACGAGTACGAGCGATTCGAGATAACGGACTACGATCTGGACAATGAGTTCAACATCAACCGGCCCCGTGGACGCCAGAGCAGGCACCAACAGATCTACGGCATTTGGGCGGATGACAGCGAGGAGGAGAGCGGCGGTGAAGGCGGGGGCACGCGGAGAGGACGGTCCGCCCGGAAGCCCAAGGATTACACCATGCCGGTCAGCTTCGTGGCCGGCGGCATTCAGCAGgcgggcaaaaagaagaaaaaggaaGTGAAGGCAAAGGAAGATGGAGGATCAAGGGCGGACCAGGACGAGCAGAGCGACGAGTCCACCGCCAGCGGTCGTCCAGCCTTCGGACAGAGCGACCCGGACAGCTCCAACAGCTCTGCGGAAGAGGAGAGACCCTCTCTGAGTCGAAAACCAATCAGTGCTCCCTTCCAACACCGCTCGCACATCTCCAGTGAGCGAAATGTGGGCGCCTGGGAACAGCATACACGTGGCATTGGAGCTAAGCTCCTTCTCCAGATGGGCTACGAGCCCGGCAAGGGTCTGGGCAAGGACCTGCAGGGCATCTCGCAGCCGGTGCAGGCCCATGTCCGCAAAGGTAGAGGCGCCATCGGTGCGTATGGACCCGAAACTGCAGCCAGCATTGGTGGAAAGCCCACCAAGAGCATCAAGGTGGATGAGGATGTGCGCGAAGCCAAGGAGTTCAAGGAACAGCTGAACAAGTGGCGGAAAGGAGGAACCGCTGGAGCCGCCGATCCTGTCGAGCGGCAGGGAAAGCGCTACTACTACAAGTCTGTCGAGGAGGTGATCGCCAAGGGCCACACATCGAGCCATCTGCTTTCGGAGAAGCTGAGCAAGAAACTGGGCAATGTCCCGGTGATCGACATGACGGGACCCGAAAAGCGAGTGCTGAGCGGCTATCACGCCTTGGGCCAGACCAAAATCACGCCGGAGGAGACGCTCTACGATGCCGAACCGACTGAAAAGGGAGCGGCTCCCGTCTGCGTGTTTGCCATGCCCGAACTGACCCACAACCTGCAGCTCTTGGTCAGCCAGTGCGAGCAGCAGATCATCGCCATCGACAACCAGGAGCGCGAGTGCTCCAGTCAACAGGCAGCTCTGGAAAGCGAACACCGaaagctggaggagatcgTCCAACTGGAACGGAATCACATTCGCACTCTGGAGGAATCTCTGGACCGAGTGGAGCGGCTGAGCGAGAATCCCGATATGACTTTGCCTCAGGCCGAACTACTCTTTCGGGAGCTTCTCGAAGACTACGCTGCCGAGTTCCAGGAGTTCGGCCTGGCGGATCTTGCAGCGGGCGTGATTGCGCCTCTCCTGAAGAGGGAACTAGTCCAGTGGCAGCCGCTGGAGAAGCCAACGGAGCCCTTGCAGCTGATTAAAAAATGGCGCGCAATGCTGCAGAAAGGAGAGCCGGCGGAGCAGCAGCCTCGCAACGTCTTCGATCCGTACTCCTCGCTCATCTGGGCAGGGGTGATGCCGTCGTTCCGGGCCAGCATCGCCGCGTGGCACTCCAAGGAGCATCCGCCCATGGCTGCCCTGCTCGACGCCTGGGCCCCCTTGCTACCCAGTTGGGTTCTCGACTCGGTTCTGGAGCAGTTGGTATTGCCTCGACTGGTGGCCGGCGTTCAGGAATGGGATCCCCTCACCGACACTGTGCCCATCGACAGTTGGGTGCTGCCGTGGCACGGAATACTGGGCAGCAAGTTGGAGGAGGCCGTCTACCCGCAGATACGCAGCAAACTGGGCGTCGCTTTGCGCGCCTGGTCTCCGCAAGATCGGTCCGCTAGGGCCATGCTAACGCCCTGGCAGCAGGCCTTCCCTGAGGAAGAGATGCAGGAGTTCCTGCAGCGGCACATTGTGCCAAAACTGCAGGCCACTCTGGGCGAGTTCGTTATCAACCCACTGCATCAGGACCTGGAGCTGTGGCACCAGGTATGGGAGTGGCACGAGCTCATCGACCCAATGTACATGGCTCAGCTGCTGGACAGGCACTTCTTTCCGCGCTGGATGCAGGTGCTCGTGGTCTGGCTGAATCAGAGTCCAGACTATGCGGAGATATCGCGGTGGTACACCGGCTGGAAGAGTATGTTGAGCGAGGCACTGCTGCGCGAGCCTAGCGTCAAGGAGCATCTGCGGCGAGCTCTGGAGATGATGCACAGGGCCAGCGACGCCCTGCTGCAGCCCACGGTCACGCCCACGCCCCCACCTCCTGTGCCTCCGGCTCCTGTAATGATGATGGACCACCTGATTCACCCGCCCGCCCAGCTGGAGTTCAAGGAGCTCGTGTCGCAGCAATGCGCTGACTTGGGCATCATCTTCGCTCCGCTTCCGGGGAGAAGGGAGATGGGCAAACAGATATATCGCGTGGGCAAGCTCTTTTGTTTCATCGATCGACACGTCTGCATGGTCAGCGATGGAAGCTTCAGCAATTGGCAGCCGATGGCACTGAATCATCTGCTGGAACGCTCACAAACTGGAATCCTATAA
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGEGGGTRRGRSARKPKDYTMPVSFVAGGIQQAGKKKKKEVKAKEDGGSRADQDEQSDESTASGRPAFGQSDPDSSNSSAEEERPSLSRKPISAPFQHRSHISSERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKPTKSIKVDEDVREAKEFKEQLNKWRKGGTAGAADPVERQGKRYYYKSVEEVIAKGHTSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQTKITPEETLYDAEPTEKGAAPVCVFAMPELTHNLQLLVSQCEQQIIAIDNQERECSSQQAALESEHRKLEEIVQLERNHIRTLEESLDRVERLSENPDMTLPQAELLFRELLEDYAAEFQEFGLADLAAGVIAPLLKRELVQWQPLEKPTEPLQLIKKWRAMLQKGEPAEQQPRNVFDPYSSLIWAGVMPSFRASIAAWHSKEHPPMAALLDAWAPLLPSWVLDSVLEQLVLPRLVAGVQEWDPLTDTVPIDSWVLPWHGILGSKLEEAVYPQIRSKLGVALRAWSPQDRSARAMLTPWQQAFPEEEMQEFLQRHIVPKLQATLGEFVINPLHQDLELWHQVWEWHELIDPMYMAQLLDRHFFPRWMQVLVVWLNQSPDYAEISRWYTGWKSMLSEALLREPSVKEHLRRALEMMHRASDALLQPTVTPTPPPPVPPAPVMMMDHLIHPPAQLEFKELVSQQCADLGIIFAPLPGRREMGKQIYRVGKLFCFIDRHVCMVSDGSFSNWQPMALNHLLERSQTGIL