Dbia013218.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila biarmipes
Gene Symbol
sip1
Assembly
GCA_018148935.1
Location
JAECYG010000047.1:17986958-17989808[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-95 1.1e-91 307.0 14.1 4 275 415 681 412 681 0.97
2 2 0.18 1.3e+03 -1.6 0.0 158 190 694 725 686 736 0.57

Sequence Information

Coding Sequence
ATGTCGGACAACGAGTACGAGCGCTTTGAAATAACAGACTATGATCTGGACAATGAGTTCAACATCAACCGGCCCCGTGGACGCCAGAGCAGGCACCAACAGATCTACGGCATCTGGGCGGATGACAGCGAGGAGGAGAGCGGTGGTGAGGGCGGTGGAACGCGGAGGGGGCGGTCCGCCCGGAAGCCCAAGGATTACACCATGCCCGTCAGCTTCGTTGCCGGTGGCATTCAGCAGGCGGGCAAAAAGAAGAAAAAGGAACTAAAGGCTAAGGACGATGGAGGATCAGGGGCGGATCAGGACGAGCAGAGCGATGAGTCCACCGCCAGTGGTCGTCCGGCCTTCGGGCAGAGCGACCCGGACAGCGCCAACAGCTCCGCGGAGGAGGAGCGGCCCTCTCTGAGCCGCAAGCCAATCAGTGCCCCCTTCCAACACCGCTCCCACATCTCGAGTGAACGAAACGTGGGTGCCTGGGAACAGCATACGCGAGGCATTGGAGCTAAGCTCCTCCTCCAGATGGGCTATGAGCCCGGCAAGGGTCTGGGCAAAGACCTGCAGGGCATCTCGCAGCCGGTGCAGGCTCATGTCCGCAAAGGCAGAGGCGCCATCGGTGCATATGGACCCGAAACAGCTGCCAGCATTGGTGGAAAGCCCACGAAGAGCATCAAGGTGGATGAGGATGTGCGCGAAGCCAAGGAGTTCAAGGAGCAGCTGAACAAGTGGCGCAAGGGTGGAGCCGCTGGAGCCGCCGATCCTGGCGAGCGGCAGGGAAAGCGCTACTACTACAAGTCCGTAGAGGAGGTGATCGCCAAGGGCCACACGTCGAGCCACCTGCTTTCGGAGAAGCTCAGCAAGAAACTGGGCAACGTACCGGTAATTGACATGACGGGACCCGAGAAGCGAGTGCTGAGCGGATATCACGCTTTGGGCCAGGCCAAAATTACGCCGGAAGAGACGCTCTACGATGCAGAGCCGACCGAAAAGGGAGTCGCTCCCGTCTGCGTGTTTGCCATGCCCGAACTGACCCACAACTTGCAGCTCTTGGTGAGTCAGTGCGAGCAGCAGATCATCGCCATCGACAATCAGGAGCGAGAGTGCTCCAGCCAACAGGCAGCGCTGGAAAGTGAGCACAGAAAGCTGGAAGAGATCGTCCAACTGGAACGGAACCACATACGCACTCTGGAGGAATCGCTGGAACGGGTGGAGCGCCTGAGTGAGAATCCCGATTTGTCACTGCCTCAGGCGGAAGTGATCTTCCGGGAGCTTCTCGAAGACTACGCAGCCGAGTTCCAGGAGTTTGGGCTGGCGGATCTGGCAGCGGGCGTGATAGCTCCGCTTCTCAAGAGAGAACTAGTTCAGTGGCAGCCGCTGGAGAAGCCAACGGAGCCCTTGCAGCTGATTAAGAAGTGGCGCGCGATGCTGCAGAAAGGAGAGCCTTCAGAGCAGCAGCCTCGCAACGTCTTCGATCCGTACTCCTCGCTGATCTGGGCCGGGGTGATGCCGTCGTTCCGGGCCAGCATCGCCGCTTGGCACTCCAAGGAGCATTCGCCCATGGCTGCCCTCCTTGACGCCTGGGCCCCCTTGCTACCCAGCTGGGTTCTCGACTCCGTTCTGGAGCAGTTGGTATTGCCACGTCTGGTGGCCGGTGTCCAGGAGTGGGATCCCCTTACCGACACCGTGCCCATCGACAGTTGGGTGCTGCCGTGGCACGGAATACTGGGCAGCAAGTTGGAGGAAGCCGTCTACCCGCAAATCCGCAGCAAACTGGGCGTAGCTTTGCGCGCCTGGTCTCCACAAGATCGGTCCGCCCGGGCCATGCTCACGCCCTGGCAGAAGGCCTTCCCTGAGGAAGAAATGCAGGAGTTCCTGCAGCGGCACATTGTGCCGAAACTGCAGGCGACTCTGGGCGAGTTCGTTATCAATCCACTGCATCAGGACCTGGAGCTGTGGCACCAGGTGTGGGAGTGGCACGAGCTCATCGAACCCATGTACATGGCTCAGTTGCTGGACAGGCACTTCTTCCCGCGCTGGATGCAGGTGCTCGTGGTCTGGCTGAATCAGAGTCCCGACTATGCGGAGATATCGCGATGGTACACCGGCTGGAAGAGCATGTTTAGCGAGGCACTGCTCCGCGAGCCAAGCGTCAAGGAGCATCTGCGCCGAGCCCTGGAGATGATGCACAGGGCTAGCGACGCCCTGCTACAGCCCACGGTCACGCCCACGCCCCCGCCGCCAGTTCCTCCGGCCCCTGTGATGATGATGGACCACCTGATTCACCCGCCCGCCCAGCTAGAGTTCAAGGAACTCGTCTCGCAGCAGTGCGCCGACTTGGGCATCATCTTCGCTCCGCTTCCAGGGAGACGGGAGATGGGCAAGCAGATCTATCGCGTGGGGAAGCTTTTCTGCTTCATCGATCGACACGTCTGCATGGTCAGCGATGGCAGCTTCAGCAACTGGCAACCGATGTCATTGAATCATCTTCTGGAACGCTCACAAACTGGAATCCTCTAA
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGEGGGTRRGRSARKPKDYTMPVSFVAGGIQQAGKKKKKELKAKDDGGSGADQDEQSDESTASGRPAFGQSDPDSANSSAEEERPSLSRKPISAPFQHRSHISSERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKPTKSIKVDEDVREAKEFKEQLNKWRKGGAAGAADPGERQGKRYYYKSVEEVIAKGHTSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLYDAEPTEKGVAPVCVFAMPELTHNLQLLVSQCEQQIIAIDNQERECSSQQAALESEHRKLEEIVQLERNHIRTLEESLERVERLSENPDLSLPQAEVIFRELLEDYAAEFQEFGLADLAAGVIAPLLKRELVQWQPLEKPTEPLQLIKKWRAMLQKGEPSEQQPRNVFDPYSSLIWAGVMPSFRASIAAWHSKEHSPMAALLDAWAPLLPSWVLDSVLEQLVLPRLVAGVQEWDPLTDTVPIDSWVLPWHGILGSKLEEAVYPQIRSKLGVALRAWSPQDRSARAMLTPWQKAFPEEEMQEFLQRHIVPKLQATLGEFVINPLHQDLELWHQVWEWHELIEPMYMAQLLDRHFFPRWMQVLVVWLNQSPDYAEISRWYTGWKSMFSEALLREPSVKEHLRRALEMMHRASDALLQPTVTPTPPPPVPPAPVMMMDHLIHPPAQLEFKELVSQQCADLGIIFAPLPGRREMGKQIYRVGKLFCFIDRHVCMVSDGSFSNWQPMSLNHLLERSQTGIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00609159;
90% Identity
iTF_00604832;
80% Identity
-