Dsim002506.1
Basic Information
- Insect
- Drosophila simulans
- Gene Symbol
- sip1
- Assembly
- GCA_016746395.1
- Location
- NC:5697145-5700184[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-92 1.9e-88 296.3 13.2 3 275 418 685 416 685 0.98 2 2 0.33 2.3e+03 -2.5 0.0 245 266 700 721 691 739 0.55
Sequence Information
- Coding Sequence
- ATGTCGGACAGCGATTACGAGCGTTTCGAGATAACGGACTACGATCTGGACAATGAGTTCAACATCAATCGACCCCGTGGCCGCCAGAGCAAGCACCAACAGATCTACGGTATTTGGGCGGATGACAGCGAGGAGGAGAGTGGCGGCGAGGGCGGAAGTAAGCGAAGGGGGCGCCCCGCCCGCAAACCCAAAGACTACACCATGCCCGTCAATTTTGTGGCCGGCGGCATTCAGCAGTCgggaaagaagaagaagaaggcgCTTCAAGCCGATGATGAGAAGGGATCGCAAAAAGAAGGAGCAGATGCGGACCAGGGCGAGCAGAGCGACGACTCTGACGCCAGCGGACGGCCAGCCTTTGGCCGGAACGTCCCGGGCAGCTCCAACAGCTCATCAGAAGAGGAGAGGCCAACGCTGGGCCGGAAACAGCCAAGCACCACATTTCAGCATCGCTCCCACATCGCCAGCGAGCGCAACGTGGGCGCCTGGGAGCAGCATACACGCGGCATTGGAGCTAAGCTGCTCCTCCAAATGGGCTATGAGCCTGGCAAGGGTCTGGGCAAAGACCTGCAGGGCATTTCGCAGCCGGTGCAAGCCCATGTCCGCAAGGGCAGAGGTGCTATCGGCGCCTATGGACCCGAAACTGCCGCAAGCATCGGAGGAAAGACGAACAAGAGCATCAAGGTGGATGAGGATGTGCGCGAGGCGAAAGAGTTCAAGGACCAGCTGAACAAGTGGCGAAAGGGCTCAGCCGGTGGCGCCGAGCCAATAGAGCGGCAGGGCAAGCGCTACTACTACAAGTCCGTGGAAGAAGTGATTGCCAAGGGCCACACGTCCAGCCACCTTCTGTCGGAGAAGCTGAGCAAGAAACTGGGCAATGTGCGGGTGATCGATATGACAGGCCCAGAGCGACGAGTTCTGAGCGGCTATCATGCCTTGGGACAGGCTAAAATTACGCCAGAGGAGACGCTCTACGACACGGAGGCGACAGAAAAGGGAACCGCTCCCGCCTGCGTATTTGCCATGCCCGAGCTGACGCACAACCTGCAGCTCCTGGTTAGCCAGTGCGAGCAGCAGATCATCGCCATCGACAACCAGGAACGCGAGTGTTCCAGCCAGCAGGCAGCGCTGGAGAGCGAGCACCGGAAGTTGGAGGAGATAGTCCAGCTAGAACAAAACCATATACGCACGCTGGAGGAATCGTTGGAGCGCGTGGAGCGGTTATGCGATAATCCAGACTTGAGTTTACCTCAGGCGGAAAGACTCTTTCGGGAGCTGCTCGTGGATTACGCTGCCGAATTCCAAGAGTTCGGACTTGCAGATCTGGCAGCCGGTGTGATAGCGCCGCTCCTGAAGAGAGAACTAGTTCAGTGGCAACCACTGGTACACCCAACGGAACCGCTGCCACTCATCAAGAAATGGCGCGGCATGCTCCAGCAAGGAGAtgcagcagagcagcagccCCGCAACGTCTTCGATCCGTACTCCTCCCTCATCTGGGCCGGCGTGATGCCTTCGTTTCGGGCCAGCGCTGCCGCATGGGAACCGAAGGAGCATCCGCTAATGGCTGCACTCCTAGATGCCTGGGCTCCCCTGCTGCCTAGCTGGGTCTTGGATTCGGTTCTCGAGCAACTGGTTCTGCCACGACTGGTGGCTGGTGTCCAGGAGTGGGATCCGCTCACCGACACCGTCCCGATCGACAGTTGGGTGCTGCCGTGGCACGCCATCTTGGGCAGCAAGCTGGAGGAGGCCGTCTATCCTCAGATCCGCAGCAAATTGGGCATGGCATTGCGCGCCTGGTCACCGCAAGACCGCTCAGCCAGGGCCATGCTTACGCCCTGGCAGAAGGCCTTCCCCGAGGAAGAGATGCAAGAGTTCCTGCAGCGGTACATAGTGCCCAAACTGCAGGCGACTCTAGGCGAGCTCATCATCAATCCGCTGCACCAGGACCTAGAGCTGTGGCACCAGGTGTGGGAGTGGCACGAACTCATCGATCCCATGTATATGGCCCAACTACTGGACAGACACTTCTTCCCGCGCTGGATGCAGGTGCTCGTCGTCTGGCTAAATCAGTCGCCGGACTACGCGGAGATCTCCCGATGGTACACCGGCTGGAAGAGCATGTTGAGCGAACCGCTTCTGCGCGAGCCCAGCGTTAAGGAGCATCTGCGGCGAGCCCTGGAAATTATGCACAGAGCCAGCGATGCCCTGCTGCAGCCCACGGTGACGCCCACGCCCCCGCCTCCAGTTCCTCCGGCTCCAGTCATAATGATGGACCTGATTCATCCGCCCGCCCAGCTGGAGTTCAAAGAGCTGGTGTCGCAGCAATGCGCCGACTTGGGAATCATCTTCGCTCCTCTGCCTGGACGACGTGAGATGGGCAAACAGATTTATCGCGTGGGAAAGCTCTTCTGCTACATCGATCGTCACGTCTGCATGGTCAGCGATGGCAGCTTCAGCAACTGGAAGCCGGTGTCGCTGAATAGTCTGCTAGAACGCTCTCAAACGGGAATTCTTTAA
- Protein Sequence
- MSDSDYERFEITDYDLDNEFNINRPRGRQSKHQQIYGIWADDSEEESGGEGGSKRRGRPARKPKDYTMPVNFVAGGIQQSGKKKKKALQADDEKGSQKEGADADQGEQSDDSDASGRPAFGRNVPGSSNSSSEEERPTLGRKQPSTTFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKTNKSIKVDEDVREAKEFKDQLNKWRKGSAGGAEPIERQGKRYYYKSVEEVIAKGHTSSHLLSEKLSKKLGNVRVIDMTGPERRVLSGYHALGQAKITPEETLYDTEATEKGTAPACVFAMPELTHNLQLLVSQCEQQIIAIDNQERECSSQQAALESEHRKLEEIVQLEQNHIRTLEESLERVERLCDNPDLSLPQAERLFRELLVDYAAEFQEFGLADLAAGVIAPLLKRELVQWQPLVHPTEPLPLIKKWRGMLQQGDAAEQQPRNVFDPYSSLIWAGVMPSFRASAAAWEPKEHPLMAALLDAWAPLLPSWVLDSVLEQLVLPRLVAGVQEWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRSKLGMALRAWSPQDRSARAMLTPWQKAFPEEEMQEFLQRYIVPKLQATLGELIINPLHQDLELWHQVWEWHELIDPMYMAQLLDRHFFPRWMQVLVVWLNQSPDYAEISRWYTGWKSMLSEPLLREPSVKEHLRRALEIMHRASDALLQPTVTPTPPPPVPPAPVIMMDLIHPPAQLEFKELVSQQCADLGIIFAPLPGRREMGKQIYRVGKLFCYIDRHVCMVSDGSFSNWKPVSLNSLLERSQTGIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00609159;
- 90% Identity
- iTF_00604832;
- 80% Identity
- -