Dmau009800.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila mauritiana
Gene Symbol
sip1
Assembly
GCA_004382145.1
Location
NC:5616843-5619786[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-93 1.8e-89 299.6 12.8 3 275 418 685 416 685 0.98
2 2 0.33 2.3e+03 -2.5 0.0 245 266 700 721 691 739 0.55

Sequence Information

Coding Sequence
ATGTCGGACAGCGATTACGAGCGTTTCGAGATAACGGACTACGATCTGGACAATGAGTTCAACATCAATCGACCCCGTGGCCGCCAAAGCAGGCACCAACAGATCTACGGTATTTGGGCGGATGACAGCGAGGAGGAGAGTGGTGGCGAGGGCGGAACTAAGCGAAGGGGGCGCGCCGCCCGCAAACCCAAAGACTACACCATGCCCGTCAATTTTGTGGCCGGCGGCATTCAGCAGTCgggaaaaaagaagaagaaggcgCTCCAAGCCGATGATGAGAAGGGATCGCAAAAAGAAGGAGCAGATGCGGACCAGGGCGAGCAGAGCGACGACTCCGACGCCAGCGGACGGCCAGCCTTTGGCCGAAACGTCCCGGTCAGCTCCAACAGCTCATCAGAAGAGGAGAGGCCTACACTGGGCCGGAAACAGCCAAGCACCACATTTCAGCATCGCTCCCACATCGCCAGCGAGCGCAACGTGGGCGCCTGGGAGCAGCATACACGCGGCATTGGAGCTAAGCTGCTCCTCCAAATGGGCTATGAGCCTGGTAAGGGTCTGGGCAAAGACCTGCAGGGCATTTCGCAGCCGGTGCAAGCCCACGTCCGCAAGGGCAGAGGTGCTATCGGCGCCTATGGACCCGAAACTGCGGCAAGCATCGGAGGAAAGACGAACAAGAGCATCAAGGTGGATGAGGATGTGCGCGAGGCGAAAGAGTTTAAGGACCAGCTGAACAAGTGGCGAAAGGGCTCAGCCGGTGGCGCCGAACCAATGGAGCGGCAGGGCAAGCGCTACTACTACAAGTCCGTGGAGGAGGTGATTGCCAAGGGCCACACGTCCAGCCACCTTCTGTCGGAGAAGCTGAGCAAGAAACTGGGCAATGTGCGGGTGATCGATATGACAGGCCCAGAGCGACGAGTGCTGAGCGGCTATCATGCCTTGGGACAGGCTAAAATTACGCCAGAGGAGACGCTCTACGACACGGAGGCGACGGAAAAGGGATCCGCTCCCGCCTGCGTGTTTGCCATGCCCGAGCTGACGCACAACCTGCAGCTCTTGGTTAGCCAGTGTGAGCAGCAGATCATCGCCATCGACAACCAGGAACGCGAGTGTTCCAGCCAGCAGGCAGCGCTGGAGAGCGAGCACCGGAAGTTGGAGGAGATTGTCCAGCTAGAACAAAACCATATACGCACGCTGGAGGAATCGTTGGAGCGCGTGGAGCGGTTAAGCGATAATCCAGACTTGAGTTTACCTCAGGCGGAACGACTCTTTCGGGAGCTGCTCGTGGACTACGCTGCCGAATTCCAAGAGTTTGGACTTGCAGATCTGGCTGCCGGTGTGATAGCGCCGCTCCTGAAGAGAGAACTAGTTCAGTGGCAGCCATTGGTACACCCATCGGAACCGCTGCCACTCATCAAGAAATGGCGCGGCATGCTCCAGCAAGGAGATGCAGCAGAGCAGCAGCCCCGCAACGTCTTCGATCCGTACTCCTCGCTCATCTGGGCCGGCGTGATGCCTTCGTTTCGGGCCAGCGCTGCCGCATGGGAACCGAAGGAGCATCCGCCAATGGCTGCACTCCTAGATGCCTGGGCACCCCTGCTGCCTAGCTGGGTCTTGGATTCGGTTCTCGAGCAACTGGTTCTGCCACGACTGGTGGCTGGTGTCCAGGAGTGGGATCCGCTCACCGACACCGTTCCGATCGACAGTTGGGTGCTGCCGTGGCACGCCATCTTGGGCAGCAAGCTGGAGGAGGCCGTCTATCCTCAGATCCGCAGCAAATTGGGCATGGCATTGCGCGCCTGGTCACCGCAAGACCGCTCAGCCAGGGCCATGCTTACGCCCTGGCAGAAAGCCTTCCCCGAGGAAGAGATGCAAGAGTTCCTGCAGCGGTACATAGTGCCCAAACTGCAGGCGACTCTAGGCGAGCTCATCATCAATCCACTGCACCAGGACCTGGAGCTGTGGCACCAGGTGTGGGAGTGGCACGAGCTCATCGATCCCATGTACATGGCCCAACTACTGGACAGACACTTCTTCCCGCGCTGGATGCAGGTGCTCGTCGTCTGGCTGAATCAGTCGCCGGATTACGCGGAGATCTCCCGATGGTACACCGGCTGGAAGAGCATGTTGAGCGAACCGCTTCTGCGCGAGCCCAGCGTTAAGGAGCATCTGCGGCGAGCCCTGGAAATTATGCACAGAGCCAGCGATGCCCTGCTGCAGCCCACGGTGACGCCCACGCCCCCGCCTCCAGTTCCTCCGGCTCCAGTCATAATGATGGACCTGATTCATCCGCCCGCCCAGCTGGAGTTCAAAGAGCTAGTGTCGCAGCAATGCGCTGACTTGGGAATCATCTTCGCTCCTCTGCCTGGACGACGTGAGATGGGCAAACAGATTTATCGCGTGGGAAAGCTCTTCTGCTACATCGATCGTCACGTCTGCATGGTCAGCGATGGCAGCTTCAGCAACTGGAAGCCGGTGTCGCTGAATCATCTGCTAGAACGCTCTCAAACGGGAATTCTTTAA
Protein Sequence
MSDSDYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGEGGTKRRGRAARKPKDYTMPVNFVAGGIQQSGKKKKKALQADDEKGSQKEGADADQGEQSDDSDASGRPAFGRNVPVSSNSSSEEERPTLGRKQPSTTFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKTNKSIKVDEDVREAKEFKDQLNKWRKGSAGGAEPMERQGKRYYYKSVEEVIAKGHTSSHLLSEKLSKKLGNVRVIDMTGPERRVLSGYHALGQAKITPEETLYDTEATEKGSAPACVFAMPELTHNLQLLVSQCEQQIIAIDNQERECSSQQAALESEHRKLEEIVQLEQNHIRTLEESLERVERLSDNPDLSLPQAERLFRELLVDYAAEFQEFGLADLAAGVIAPLLKRELVQWQPLVHPSEPLPLIKKWRGMLQQGDAAEQQPRNVFDPYSSLIWAGVMPSFRASAAAWEPKEHPPMAALLDAWAPLLPSWVLDSVLEQLVLPRLVAGVQEWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRSKLGMALRAWSPQDRSARAMLTPWQKAFPEEEMQEFLQRYIVPKLQATLGELIINPLHQDLELWHQVWEWHELIDPMYMAQLLDRHFFPRWMQVLVVWLNQSPDYAEISRWYTGWKSMLSEPLLREPSVKEHLRRALEIMHRASDALLQPTVTPTPPPPVPPAPVIMMDLIHPPAQLEFKELVSQQCADLGIIFAPLPGRREMGKQIYRVGKLFCYIDRHVCMVSDGSFSNWKPVSLNHLLERSQTGIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00609159;
90% Identity
iTF_00604832;
80% Identity
-