Dsup002783.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila subpulchrella
Gene Symbol
sip1
Assembly
GCA_014743375.2
Location
NC:20679633-20682552[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-94 1e-90 303.8 13.8 5 275 416 681 412 681 0.97
2 2 0.031 2.3e+02 0.9 0.1 156 201 692 734 686 737 0.75

Sequence Information

Coding Sequence
ATGTCGGACAACGAGTACGAGCGATTCGAGATAACGGACTACGATCTGGACAATGAGTTCAACATCAACCGGCCCCGTGGACGCCAGAGCAGGCACCAACAGATCTATGGCATTTGGGCGGATGACAGCGAGGAGGAGAGCGGCGGCGAGGGCGGGGGCACGCGGAGGGGGCGGTCCGCCCGGAAGCCCAAGGATTACACTATGCCGGTCAGTTTCGTGGCCGGTGGCATTCAGCAGgcgggcaaaaagaagaaaaaggaAGTGAAGGCAAAGGACGATGGAGGATCAGGGGCGGACCAGGATGAGCACAGCGACGAGTCCACCGCCAGTGGTCGTCCGGCCTTCGGGCAAAGCGACCCGGACAGCTCCAACAGCTCGGCGGAAGAGGAGAGACCCTCTCTAAGCCGAAAACCCATCAGTGCCCCCTTTCAACACCGCTCGCACATCTCCAGTGAGCGAAATGTAGGCGCCTGGGAACAGCATACACGTGGCATTGGAGCTAAGCTCCTGCTGCAGATGGGCTATGAGCCCGGCAAGGGTCTGGGCAAGGACCTGCAGGGCATCTCGCAGCCGGTGCAGGCTCATGTCCGCAAAGGCAGAGGCGCCATCGGTGCGTATGGACCCGAAACTGCAGCCAGCATTGGTGGAAAGCCCACCAAGAGCATCAAGGTGGATGAGGATGTGCGCGAAGCCAAGGAGTTCAAGGAACAGCTTAACAAGTGGCGCAAGGGAGGAACTGCTGGAGCCGCCGATCCTGTCGAGCGGCAGGGAAAGCGTTACTACTACAAGTCCGTCGAGGAGGTGATCGCCAAGGGTCACACATCGAGCCACCTGCTTTCGGAGAAGCTGAGCAAGAAACTGGGCAATGTGCCGGTGATCGACATGACGGGACCCGAAAAGCGAGTGCTGAGCGGCTATCACGCCTTGGGCCAGACCAAAATCACGCCGGAGGAGACGCTCTACGATGCCGAGCCGACTGAAAAGGGAGCCGCTCCCGTCTGCGTGTTTGCCATGCCCGAGCTGACCCACAACCTGCAGCTCTTGGTCAGCCAGTGCGAGCAGCAGATCATCGCCATCGACAACCAGGAGCGTGAGTGCTCCAGCCAGCAGGCATCGCTGGAGAGCGAACACCGAAAGCTCGAGGAGATCGTCCAACTGGAACGGAATCACATTCGCACTCTGGAGGAATCTCTGGACCGAGTGGAGCGGTTGAGCGAGAATCCCGACTTGGCTTTGCCTCAGGCGGAACTACTCTTTCGGGAGCTACTCGAAGACTACGCTGCTGAGTTCCAGGAGTTCGGCCTGGCGGATCTTGCAGCAGGCGTAATTGCACCACTCCTGAAGAGGGAACTAGTCCAGTGGCAGCCGCTGGAGAAGCCAACGGAGCCATTGCAGCTGATTAAGAAATGGCGCGCAATGCTGCAGAGAGGAGAGCCGGCGGAGCAGCAGCCTCGCAACGTCTTCGATCCGTACTCCTCGCTCATCTGGGCCGGTGTGATGCCGTCGTTCCGGGCCAGCATCGCCGCCTGGCACTCCAAGGAGCATCCGCCCATGGCTGCCCTGCTCGACGCCTGGGCCCCCTTGTTGCCCAGCTGGGTTCTCGACTCGGTTCTGGAGCAGTTGGTATTGCCTCGACTGGTGGCCGGCGTTCAGGAATGGGATCCCCTTACCGACACCGTGCCCATCGACAGTTGGGTGCTACCGTGGCATGGAATACTGGGCAGTAAGCTGGAGGAGGCTGTTTACCCGCAAATCCGCAGTAAACTGGGCGTCGCTCTGCGTGCCTGGTCTCCGCAAGATAGGTCCGCCCGGGCCATGCTCACGCCCTGGCAGCAGGCCTTTCCCGAGGAAGAGATGCAGGAGTTTCTGCAGCGGCACATTGTGCCAAAACTGCAGGCCACTCTGGGCGAGTTCGTTATCAACCCACTGCATCAGGACCTGGAGCTGTGGCACCAGGTGTGGGAGTGGCACGAGCTCATTGATCCCATGTACATGGCTCAACTGCTGGACAGGCACTTCTTCCCTCGCTGGATGCAGGTGCTTGTGGTCTGGCTGAATCAGAGTCCCGACTATGCGGAGATATCGCGTTGGTACACCGGCTGGAAGAGCATGTTGAGCGAGGCACTGCTCCGCGAGCCAAGCATCAAGGAGCATCTGCGGCGAGCTCTGGAGATGATGCACAGGGCCAGCGATGCCCTGCTGCAGCCCACGATCACGCCCACGGCTCCGCCGCCGCCAGTTCCTCCGGCCCCTGTGATGATGATGGACCACCTGATTCACCCGCCCGCCCAGCTGGAGTTTAAGGAGCTCGTGTCGCAGCAATGCGCCGACTTGGGCATCATCTTCGCTCCGCTTCCGGGGAGACGGGAGATGGGCAAACAGATCTATCGCGTGGGCAAGCTGTTTTGCTTCATCGATCGACACGTCTGCATGGTCAGCGATGGAAGCTTCAGCAACTGGCAGCCGATGGCACTGAATCATCTGCTGGAACGCTCTCAAACTGGGATCCTTTAA
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGEGGGTRRGRSARKPKDYTMPVSFVAGGIQQAGKKKKKEVKAKDDGGSGADQDEHSDESTASGRPAFGQSDPDSSNSSAEEERPSLSRKPISAPFQHRSHISSERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKPTKSIKVDEDVREAKEFKEQLNKWRKGGTAGAADPVERQGKRYYYKSVEEVIAKGHTSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQTKITPEETLYDAEPTEKGAAPVCVFAMPELTHNLQLLVSQCEQQIIAIDNQERECSSQQASLESEHRKLEEIVQLERNHIRTLEESLDRVERLSENPDLALPQAELLFRELLEDYAAEFQEFGLADLAAGVIAPLLKRELVQWQPLEKPTEPLQLIKKWRAMLQRGEPAEQQPRNVFDPYSSLIWAGVMPSFRASIAAWHSKEHPPMAALLDAWAPLLPSWVLDSVLEQLVLPRLVAGVQEWDPLTDTVPIDSWVLPWHGILGSKLEEAVYPQIRSKLGVALRAWSPQDRSARAMLTPWQQAFPEEEMQEFLQRHIVPKLQATLGEFVINPLHQDLELWHQVWEWHELIDPMYMAQLLDRHFFPRWMQVLVVWLNQSPDYAEISRWYTGWKSMLSEALLREPSIKEHLRRALEMMHRASDALLQPTITPTAPPPPVPPAPVMMMDHLIHPPAQLEFKELVSQQCADLGIIFAPLPGRREMGKQIYRVGKLFCFIDRHVCMVSDGSFSNWQPMALNHLLERSQTGIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00609159;
90% Identity
iTF_00604832;
80% Identity
-