Dere000740.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila erecta
Gene Symbol
sip1
Assembly
GCA_000005135.1
Location
CH954177.1:5811519-5814156[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.9e-96 3e-92 309.1 13.9 3 275 418 685 416 685 0.98
2 2 0.11 6.8e+02 -0.3 0.1 157 199 697 736 690 740 0.66

Sequence Information

Coding Sequence
ATGTCGGACAACGAGTATGAGCGTTTCGAGATAACGGACTACGACCTGGACAATGAGTTCAACATCAACCGGCCTCGTGGCCGCCAGAGTCGGCACCAACAGATCTACGGTATTTGGGCGGATGACAGCGAGGAGGAGAGTGGTGGCGAGGCCGCAGCCACACGAAGGGGGCGCGCCGCCCGCAAGCCCAAGGACTACACCATGCCCGTCAATTTTGTGGCCGGCGGCATTCAGCAGGCGGgtaaaaagaagaagaaggcgCTAAAAGCCGATGATGACAAAGGTACGCAAAGAGAGGGCGCCGAGGAGGACCAGGGCGAACAGAGCGACGACTCCGCCGCCAGCGGACGACCAGCCTTTGGCCAGAACGACCCGGGCAGCTCCAACAGCTCCGCGGAAGAGGAGAGGCCATCGCTGGGCCGGAAACAGGCAAACACCACATTTCAGCACCGCTCCCACATCGCCAGCGAGCGCAACGTGGGCGCCTGGGAGCAGCATACACGCGGCATCGGAGCTAAGCTTCTGCTCCAAATGGGCTATGAGCCCGGCAAGGGTCTGGGCAAGGACTTGCAGGGCATCTCGCAGCCGGTGCAAGCCCATGTACGCAAGGGCAGAGGAGCTATTGGCGCCTATGGACCCGAAACTGCCGCAAGCATCGGAGGAAAGACGAACAAGAGCATCAAAGTGGATGAGGACGTGCGCGAGGCAAAAGAGTTCAAGGACCAGCTGAACAAGTGGCGAAAGGTCTCAGCCGGTGGGGCCGATACGGTAGAGCGGCAGGGTAAGCGCTACTACTACAAGTCCGTGGAGGAGGTGATTGCCAAGGGCCACACGTCCCACCACCTGCTGTCGGAGAAGCTGAGCAAGAAACTGGGCAATGTGCCGGTGATCGATATGACAGGCCCAGAGAAGCGAGTGCTGAGTGGCTATCATGCCTTGGGACAGGCCAAAATTACGCCAGAGGAGACGCTCTACGAGGCGGAAGCAACGGAAAAGGGATCCGCGCCCGTCTGCGTATTTGCCATGCCCGAGCTGACGCACAACCTGCAGCTCTTGGTTAGCCAGTGCGAGCAGCAGATCATCGCCATCGACAACCAAGAACGCGAGTGCTCCAGCCAGCAGGCAGCGCTGGAGAGCGAGCACCGGAAGCTGGAGGAGATCGTCCAACTAGAACGAAACCACATACGCACGCTGGAGGAATCCCTTGACCGCGTGGAGCGGTTAAGCGAGAATCCAGATCTGAGTTTGCCTCAGGCGGAACGTCTCTTTCGCGAGTTGCTCGTGGACTACGCCGCCGAATTCCAAGAGTTCGGGCTGGCAGATCTTGCAGCGGGCGTAATAGCGCCGCTTCTGAAGAGGGAACTAGTTCAGTGGCAGCCACTGGAACAGCCAACGGAGCCGCTGCAGCTTATTAAGAAATGGCGTGGGATGCTCCAGCAAGGCGATGCCGCGGAGCAGCAGCCCCGCAACGTCTTCGATCCGTACTCCTCGCTCATCTGGGCCGGAGTGATGCCTTCGTTTCGGACCAGCGCCGCCGCATGGCAGCCAAAGGAACATCCGCCGATGGCTGCACTCCTGGACGCCTGGGCTCCCCTGCTACCCAGTTGGGTTTTGGATTCGGTTCTCGAGCAACTGGTTCTGCCACGATTGGCGGCTGGAGTCCAGGAGTGGGACCCGCTCACCGACACCGTCCCAATCGACAGTTGGGTGCTGCCCTGGCACGCCATCTTGGGCAGTAAGCTGGAGGAGGCCGTCTATCCTCAGATCCGCAGCAAACTGGGCGTGGCATTGCGCGCCTGGTCCCCGCAAGATCGGTCCGCTAGGGCCATGCTCACGCCCTGGCAGAAGGCCTTCCCCAAGGAGGAAATGCAAGAGTTCCTGCAGCGGCACATAGTGCCCAAGCTGCAGGCGACTTTGGGCGAGTTCATTATCAACCCACTGCACCAGGACCTGGAACTGTGGCAGCAGGTGTGGGAGTGGCACGAGCTCATCGATCCAATGTACATGGCCCAGCTGCTGGACAGACACTTCTTCCCGCGCTGGATGCAGGTGCTCGTAGTCTGGCTGAATCAGTCACCGGACTACGCAGAGATCTCGCGATGGTACACCGGCTGGAAGAGCATGTTGAGTGAACCGCTTCTGCGCGAGCCCAGCATCAAGGAGCATCTGCGTCGAGCTCTGGAAATGATGCACAGAGCCAGCGATGCCCTGCTGCAGCCGACGGTCACGCCCACGCCCCCGCCTCCAGTTCCTCCGGCTCCAGTCATAATGATGGACCTGATTCATCCGCCCGCCCAGCTGGAGTTCAAAGAGCTGGTGTCGCAGCAATGCGCCGACTTGGGAATCATCTTCGCTCCTCTGCCGGGGCGACGAGAGTTGGGCAAACAGATTTATCGCGTGGGCAAGCTCTTTTGCTTCATCGATCGTCACGTCTGCATGGTCAGCGATGGAAGCTTTAGCAACTGGAAGCCGGTGGCACTGAATCATCTGCTGGAACGCTCTCAAACGGGAatcctttaa
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGEAAATRRGRAARKPKDYTMPVNFVAGGIQQAGKKKKKALKADDDKGTQREGAEEDQGEQSDDSAASGRPAFGQNDPGSSNSSAEEERPSLGRKQANTTFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKTNKSIKVDEDVREAKEFKDQLNKWRKVSAGGADTVERQGKRYYYKSVEEVIAKGHTSHHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLYEAEATEKGSAPVCVFAMPELTHNLQLLVSQCEQQIIAIDNQERECSSQQAALESEHRKLEEIVQLERNHIRTLEESLDRVERLSENPDLSLPQAERLFRELLVDYAAEFQEFGLADLAAGVIAPLLKRELVQWQPLEQPTEPLQLIKKWRGMLQQGDAAEQQPRNVFDPYSSLIWAGVMPSFRTSAAAWQPKEHPPMAALLDAWAPLLPSWVLDSVLEQLVLPRLAAGVQEWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRSKLGVALRAWSPQDRSARAMLTPWQKAFPKEEMQEFLQRHIVPKLQATLGEFIINPLHQDLELWQQVWEWHELIDPMYMAQLLDRHFFPRWMQVLVVWLNQSPDYAEISRWYTGWKSMLSEPLLREPSIKEHLRRALEMMHRASDALLQPTVTPTPPPPVPPAPVIMMDLIHPPAQLEFKELVSQQCADLGIIFAPLPGRRELGKQIYRVGKLFCFIDRHVCMVSDGSFSNWKPVALNHLLERSQTGIL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00609159;
90% Identity
iTF_00604832;
80% Identity
-