Dosh002925.1
Basic Information
- Insect
- Drosophila oshimai
- Gene Symbol
- sip1
- Assembly
- GCA_018150695.1
- Location
- JAECWM010000061.1:1051571-1054205[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-95 4.4e-91 305.2 14.8 3 275 419 686 417 686 0.98 2 2 0.14 1.2e+03 -1.2 0.0 157 193 698 731 691 741 0.60
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTATGAGCGCTTCGAGATAACAGACTACGATCTGGACAACGAGTTCAACATAAACCGACCCCGTGGACGCCAGAGCAGACACCAGCAGATCTATGGTATTTGGGCGGATGACAGCGAAGAGGAGAGTGGTGGCGAGAATGGAGGAAGCCGGAGAGGACGGTCTGCCCGGCAGCCCAAGGACTACACCATGCCTGTGAACTTTGTGGCCGGTGGTATTCAGCAGGCGGGTAAAAAGAAAAAAAAGGCCCTACAGACGGCCGACGACGAGGGATCGAAAAAGGAGCCACTCGGAGAAGCGGAGAAGGGCGAACAGAGCGACGGCTCTGCCGAAAGCGGGCGTCCCGCCTTCGGTCAGAGCGATCCGGACAGCTCTAATAGCTCCGTGGAGGAGGAAAGGCCATCGCTGAGCAGAAAGCCGGCCACTGTTACCTTCCAGCACCGCTCGCACATCGCCAGCGAGAGGAACGTGGGCGCCTGGGAGCAGCATACGCGCGGCATCGGCGCCAAGCTGCTCCTTCAGATGGGCTACGAGCCCGGCAAGGGCCTGGGCAAGGACCTGCAGGGAATCTCGCAGCCAGTGCAGGCCCACGTGCGGAAAGGCAGGGGGGCCATTGGTGCCTACGGTCCCGAAACTGCTGCCAGTGTCGGTGGAAAGCCCACCAAGAGCATCAAAGTGGACGAGGACGTGCGAGAAGCAAAGGAATTTAAAGACCAGCTGAACAAGTGGCGCAAGGGGGTGGCAGCTGGATCGGATCCGCAGGAGCGTCAGGGAAAGCGATACTACTACAAGTCCGTTGAGGAGGTAATAGCCAAGGGCCACACGTCCAGCCATCTGCTCTCCGAGAAGCTCAGCAAGAAACTGGGCAATGTTCCGGTGATTGACATGACTGGACCTGAAAAGCGAGTGCTCAGTGGCTATCATGCCCTGGGTCAGGCCAAGATTACGCCGGAAGAGACGCTCTACGACGCCGAACCGACTGAAAAGGGAGCCGCTCCCGTCAGCGTGTTTGCCATGCCCGAACTGACGCACAACCTGCAGCTCTTGGTGAGCCAGTGCGAGCAGCAGATCATCGCAATCGACAATCAGGAGCGCGAGTGCGCCAGCCAGCAGGCAGCGCTGGAGAGCGAGCACCGCAAGCTGGAGGAGATTGTGCACTTAGAGCGAAACCATATTCACACGCTGGAAGAGTCCCTAGACCGAGTAGAGCGGCTGAGCGAGGATCCCGAGTTGAAGTTGCCACAGGCGGAGCGACTCTTCCGGGAGCTGCTAGATAACTACACCGCTGAGTTCCAGGAGTTCGGTCTAGCGGATCTAGCAGCGGGCGTGATAGCGCCACTTCTAAAGAGGGAGTTAGTCCAGTGGCAGCCGCTGGAGCAGCCAACGGAGCCGTTGCAACTGGTTAAAAAATGGCGCGCAATGCTGCAGCAAGGGGAGCCAGCGGAGCAGCAGCCACGCAACGTTTTCGATCCGTACTCCTCGCTTATCTGGGCCGGGGTTATGCCCTCATTCCGGGCCAGCGCCGCTGCCTGGCAGCCGAAGGAGCATCCTCCTATGGCGGCACTTCTGGACGCCTGGGCCCCTTTACTGCCCAGCTGGGTGCTAGACTCGGTGCTCGAGCAGTTGGTGCTGCCTCGATTGGTAGCTGGCGTCCAGGATTGGGATCCCCTAACCGACACTGTGCCTATTGATAGCTGGGTGCTTCCATGGCACGCCATCCTGGGCAGCAAGCTGGAGGAGGCCGTCTACCCCCAGATTCGCAGCAAACTGGGGTTGGCCCTCCGCGCCTGGTCGCCGCATGATCGCTCCGCCAGGGCCATGCTTACGCCCTGGCAGCAGGCCTTTCCCGAGGAGGAGATGCAGGAGTTCCTGCAGCGTCACATCTTACCGAAACTCCAGGCGACTCTGGGTGAGTTCGTTATCAATCCGCTGCACCAGGACTTAGAGCTGTGGCACCAGGTGTGGGAGTGGCATGAACTTTTTGAACCCATGTACATGGCTCAGCTTCTGGACAGGCACTTTTTCCCGCGCTGGATGCAGGTGCTTGTAGTCTGGTTGAATCAGTCCCCCGACTACGCGGAGATATCGCGGTGGTACACCGGCTGGAAGAGCATGCTGAGTGAGCCGCTTCTTCGCGAGCCAAGCGTCAAGGAGCATCTGCGCCGAGCTCTTGAAATGATGCACCGTGCCAGCGACGCCCTTCTTCAGCCCACTGTCTCTCCCACGCCACCGCCGCCCGTTCCTCCGGCCCCTGTAATGATGATGGATCTGGTTCATCCGCCCGCGCAGCTGGAGTTCAAAGAGCTCGTGTCGCAGCACTGCGCCGATCTGGGAATTATCTTTGCTCCTCTTCCAGGGCGAAGGGAGATGGGCAAGCAGATCTATCGCGTGGGCAAGCTCTTTTGCTACATCGATCGCCACGTTTGCATGCTTAGCGATGGAAGCTTCAGCAACTGGCAGCCGGTGGCCCTAAATCAGCTGCTGGAACGCTCTCAAACAGGAATCGTCTGA
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGENGGSRRGRSARQPKDYTMPVNFVAGGIQQAGKKKKKALQTADDEGSKKEPLGEAEKGEQSDGSAESGRPAFGQSDPDSSNSSVEEERPSLSRKPATVTFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGKPTKSIKVDEDVREAKEFKDQLNKWRKGVAAGSDPQERQGKRYYYKSVEEVIAKGHTSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLYDAEPTEKGAAPVSVFAMPELTHNLQLLVSQCEQQIIAIDNQERECASQQAALESEHRKLEEIVHLERNHIHTLEESLDRVERLSEDPELKLPQAERLFRELLDNYTAEFQEFGLADLAAGVIAPLLKRELVQWQPLEQPTEPLQLVKKWRAMLQQGEPAEQQPRNVFDPYSSLIWAGVMPSFRASAAAWQPKEHPPMAALLDAWAPLLPSWVLDSVLEQLVLPRLVAGVQDWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRSKLGLALRAWSPHDRSARAMLTPWQQAFPEEEMQEFLQRHILPKLQATLGEFVINPLHQDLELWHQVWEWHELFEPMYMAQLLDRHFFPRWMQVLVVWLNQSPDYAEISRWYTGWKSMLSEPLLREPSVKEHLRRALEMMHRASDALLQPTVSPTPPPPVPPAPVMMMDLVHPPAQLEFKELVSQHCADLGIIFAPLPGRREMGKQIYRVGKLFCYIDRHVCMLSDGSFSNWQPVALNQLLERSQTGIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00609159;
- 90% Identity
- iTF_00604832;
- 80% Identity
- -