Dmim007482.1
Basic Information
- Insect
- Drosophila mimetica
- Gene Symbol
- sip1
- Assembly
- GCA_037075245.1
- Location
- JBAMCH010000007.1:13959618-13962250[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-94 9.3e-91 304.4 12.5 3 275 414 681 412 681 0.98 2 2 0.35 1.8e+03 -1.6 0.0 158 190 694 725 686 736 0.57
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTACGAGCGGTTCGAGATAACGGACTACGATCTGGACAATGAGTTCAACATCAACCGGCCCCGTGCCCGCCAGAGCAGGCACCAGCAGATCTACGGCATTTGGGCGGACGACAGCGAGGAGGAGAGCGGTGGGGAGGGCGGGGGTACGCGGAGGGGGCGGACCGCCCGCAAGCCGAAGGACTACACCATGCCCGTGAGCTTTGTGGCCGGAGGGATTCAGCAAGcgggaaaaaagaagaaagacgCAAAGACCAAAGACGATGGAGGATCGGGGGCGGACCAGGGCGAACAGAGCGACGACTCTGCCGCCAGCGGACGACCGGCGTTCGGACAGAGCGACCCGGACAGCTCCAACAGCTcggcggaggaggagaggCCCTCCCTAAGCCGTAAGCCGGTCAACGCGCCATCCTTCCAACACCGTTCACACATCTCCAGCGAGCGGAATGTGGGCGCTTGGGAGCAACACACGCGTGGCATTGGAGCCAAGCTGCTCCTCCAGATGGGCTACGAGCCCGGCAAGGGCCTGGGCAAGGACCTGCAGGGCATCTCGCAGCCGGTGCAGGCCCATGTGCGCAAGGGCAGAGGCGCCATCGGTGCCTATGGACCCGAAACTGCTGCCAGCATCGGTGGAAAGCCCTCCGCCAAGAGCATCAAAATGGATGAGGATGTGCGCGAGGCAAAGGAGTTCAAGGACCAGCTGAACAAGTGGCGCAAGGGTGGCACGTCCGGAGCCGATCCTGTTGAGCGGCAGGGAAAGCGCTACTACTACAAGTCGGTCGAGGAGGTGATTGCCAAGGGCCACACCTCGAGCCACATCCTGTCGGAGAAACTGAGCAAGAAACTGGGCAATGTGCCGGTGATCGACATGACGGGACCCGAAAAGCGCGTACTGAGTGGCTATCACGCCTTGGGTCAGGCCAAAATTACGCCCGAGGAGACGCTCTACGATGCCGAACCCACGGAGAAGGGGGCGGCacccgtgtgtgtgtttgccatGCCCGAACTAACGCACAACCTACAGCTCTTGGTGAGCCAATGCGAGCAGCAGATCATCGCCATCGACAACCAGGAGCGCGAGTGCTCCAGCCAGCAGGCAGCGCTGGAGAGCGAACACCGAAAGCTGGAGGAGATTGTCCAACTGGAACGGAATCACATTCGCACCCTAGAGGAATCGCTGGATCGAGTGGAGCGGCTAAGCGAGAACCCCGATTTGAGTTTGCCTCAGGCGGAGAGACTTTTTCGCGAGCTTCTCGAGGACTACAGCGCCGAGTTTCAAGAGTTTGGCCTGGCGGATCTTGCAGCGGGTGTGATAGCACCGCTCCTGAAGAGGGAACTGGTCCAGTGGCAGCCGCTGGAGCAACCAACGGAGCCAATTCCGCTGATTAAGAAGTGGCGTGCTTTGCTGCAGCACGGAGAGCCGGCGGAGAAGCAGCCGCGCAACGTCTTCGACCCATACTCCTCGCTCATCTGGGCCGGGGTGATGCCGTCGTTCCGGGCCAGCGTCGCCGCCTGGCACTCCAAGGAGCACCCACCAATGGCCGCTCTTCTCGACGCCTGGGCCCCCTTGCTGCCCAGTTGGGTTCTCGACTCGGTGCTGGAGCAGTTGGTGCTGCCTCGATTGGTGGCTGGTGTGCAGGAGTGGGATCCCCTCACGGACACCGTTCCCATCGATAGTTGGGTGCTACCGTGGCACGGAATACTAGGCAGTAAACTGGAGGAGGCTGTCTACCCGCAAATCCGCAGTAAACTGGGCGTGGCTTTACGCGCCTGGTCGCCGCAGGATCGTTCAGCCAGGGCCATGCTCACGCCCTGGCAGCAAGCCTTCCCCGAGGAAGAGATGCAGGAGTTCCTGCAACGGCACATTGTACCGAAACTACAGGCGACGCTGGGCGAGTTTGTCATCAACCCACTGCATCAGGACCTGGAGCTGTGGCACCAGGTGTGGGAGTGGAACGAGCTCATCGATCCCATGTACATGGCCCAGCTGCTGGACAGGTACTTCTTCCCGCGCTGGATGCAGGTGCTCGTGGTCTGGCTGAATCAGAGTCCCGACTACGCAGAGATATCGCGATGGTACACCGGCTGGAAGAGCATGTTCAGCGAGGCTTTACTCCGTGAGCCCAGCGTGAAGGAGCATCTGCGTCGGGCGCTGGAAATGATGCACCGAGCCAGCGACGCTCTGCTGCAGCCCACGGTCACGCCCACACCCCCGCCGCCAGTTCCTCCGGCCCCTGTGATCATGATGGACCTGATTCATCCGCCCGCCCAGCTGGAGTTCAAGGAGCTTGTGTCGCAGCAATGCGCCGACTTGGGAATAATCTTCGCTCCTCTTCCCGGGAGACGGGAGTTGGGCAAACAGATATATCGCGTTGGCAAGCTGTTTTGCTACATCGATCGCCACGTCTGCATGGTCAGCGATGGAAGCTTTAGCAACTGGCAGCCGATGGCTCTGAATCACCTGATAGAACGCTCACAAACTGGAATcctcaaataa
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRARQSRHQQIYGIWADDSEEESGGEGGGTRRGRTARKPKDYTMPVSFVAGGIQQAGKKKKDAKTKDDGGSGADQGEQSDDSAASGRPAFGQSDPDSSNSSAEEERPSLSRKPVNAPSFQHRSHISSERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKPSAKSIKMDEDVREAKEFKDQLNKWRKGGTSGADPVERQGKRYYYKSVEEVIAKGHTSSHILSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLYDAEPTEKGAAPVCVFAMPELTHNLQLLVSQCEQQIIAIDNQERECSSQQAALESEHRKLEEIVQLERNHIRTLEESLDRVERLSENPDLSLPQAERLFRELLEDYSAEFQEFGLADLAAGVIAPLLKRELVQWQPLEQPTEPIPLIKKWRALLQHGEPAEKQPRNVFDPYSSLIWAGVMPSFRASVAAWHSKEHPPMAALLDAWAPLLPSWVLDSVLEQLVLPRLVAGVQEWDPLTDTVPIDSWVLPWHGILGSKLEEAVYPQIRSKLGVALRAWSPQDRSARAMLTPWQQAFPEEEMQEFLQRHIVPKLQATLGEFVINPLHQDLELWHQVWEWNELIDPMYMAQLLDRYFFPRWMQVLVVWLNQSPDYAEISRWYTGWKSMFSEALLREPSVKEHLRRALEMMHRASDALLQPTVTPTPPPPVPPAPVIMMDLIHPPAQLEFKELVSQQCADLGIIFAPLPGRRELGKQIYRVGKLFCYIDRHVCMVSDGSFSNWQPMALNHLIERSQTGILK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00609159;
- 90% Identity
- iTF_00604832;
- 80% Identity
- -