Doch000951.1
Basic Information
- Insect
- Drosophila ochracea
- Gene Symbol
- grn
- Assembly
- GCA_035044125.1
- Location
- JAWNML010000003.1:7744224-7766351[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-19 5e-16 57.9 4.7 1 35 388 421 388 422 0.98 2 2 9.4e-19 1.7e-15 56.2 6.3 1 35 448 481 448 482 0.97
Sequence Information
- Coding Sequence
- ATGGATATTATCGCAGGCAACGATCGATCGCAAGCTGGCAGCAGCCAACCGGGCAACAcATCCCGCATGCCCTCCTCACATGCCACGCCCCAAGTGTGCCGTCCGCACTTTCATACGCCGCTCAGTCCCTGGCTGACCAGTGAACACAAATCGTTTGCACCCGCCAGTGCCTGGGGCATGGGTCAGTTCGCCTGCCCCCAGGAACCGCAAGTGGAGCACAAACTGGGCCAGGTGGGCCAAAGCCATCAGACGACGGCAGCCGGCCAGCACTCGTTCCCATTCCCACCAACACCGCCAAAGGACTCCACGCCCGACTCAGTACAAACCGGTCCATCCGAGTACCAGGCCGTGATGAACGCTTTTATGCACCAGCAGGCCACGGGCTCTACCTCACTGACGGACGCCAGTTGTGCGCTGGATATCAAGCCCTCCATACAGAATGGTGGCGCATCCGTTGCGCATGCCGGCAGCGCTGGACCCGCCCAATCCTCGGCGCCCAAGCAGCGCGAAGGTAgtactaacaacaacaacaacaccaacaatacaaatagctcaaatagcagcagtagcagcgccAATCAagcgccgcagcagcagcagcaacaacaacagcagcagcaacagcagaatagcaacaacaacaacaacagcaatgcctcctcatccgcatccgcatcgaCATCGAATGGACTATTCGATGGAACCGCCCAGGCTCACTATGCGGCAAACAATGCGAACAGCTACGACAGCAGCTATGCCTCGTATCACCATGCGGCGGCACAGCATCAagcggctgttgctgcggccAATATGTTCCAAAGTTCCTCcgtggcagcagcggctgtGCGGCATAGCATGGGTGccgcagcggcggcggcagcgcaTCACCACCATCATCACAGTCATGGCCATCATCATAGTGCATCCGCCTCCGCCGGTCCGGGTGCGGGTTCCGGCTCGGGTCTGCACGGTGGCGGcggtgttggtggtgttggtggtgttggtggtatGAGTGGCATGGGCGCTATGAGCAGCGGCGGTCATAGCAGCTCCAGTGGcactggcggcggcggcggcggcggtggtggagGTGTTGGTGGCGTTGGTCTCGATGTGAAACCCGTGCGCACAAAGCCCAGGACGAGTGCTGagGGCCGCGAGTGCGTTAACTGTGGTGCGACCTCAACACCACTGTGGCGACGCGATGGAACTGGACATTATCTGTGCAATGCATGCGGACTCTACTATAAAATGAATGGACAGAATCGGCCCTTGATCAAGCCAAAGCGAAGACTGaCATTACAGTCGCTGCAGAGTGCGGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAagaccacaaccacaaccctTTGGCGACGCAATGCCAGCGGCGAGCCCGTTTGCAATGCCTGCGGATTGTACTACAAGCTGCACAACGTCAATCGTCCACTTACCATGAAAAAGGAGGGCATACAGACGCGTAATCGCAAGCTCAGCTCCAAGTCGAAGAAGAAAAAGGGCTTGGGCGGCGGCTGTCTACCGATGGGCGGCCATTTGGGCATGGGCGATTTCAAGCCGCTCGATCCATCGAAAGGTTTTGGCGGCGGCTTCTCCGCATCCATGGCGCAACATGGACACCTTTCCAGCGGACTGCATCCGGCACATGCGCATATGCATGGCAGCTGGTATACCGGCGGCATGGGCGCATTGGGTGCCTCCAGTGGACTGCAGGGTGGCTTCTCCACGGCAGGCTCCCTTGGGGGCGGTGTTGTGCCCCACTCTCAGCCCTATCACTTGGGTCTCAGCTCGATGGGCACATGGCGCACAGACTATACGTGA
- Protein Sequence
- MDIIAGNDRSQAGSSQPGNTSRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWGMGQFACPQEPQVEHKLGQVGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGGASVAHAGSAGPAQSSAPKQREGSTNNNNNTNNTNSSNSSSSSANQAPQQQQQQQQQQQQQNSNNNNNSNASSSASASTSNGLFDGTAQAHYAANNANSYDSSYASYHHAAAQHQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHHHHHHSHGHHHSASASAGPGAGSGSGLHGGGGVGGVGGVGGMSGMGAMSSGGHSSSSGTGGGGGGGGGGVGGVGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502178; iTF_00583336; iTF_00514550; iTF_00517368; iTF_00602241; iTF_00537892; iTF_00523333; iTF_01549936; iTF_00471269; iTF_00479158; iTF_00586342; iTF_00339559; iTF_00338798; iTF_00522599; iTF_00525544; iTF_00559147; iTF_00511660; iTF_00544876; iTF_00545631; iTF_00558317; iTF_00608843; iTF_00508754; iTF_01327538; iTF_00510195; iTF_00573704; iTF_00572976; iTF_00500693; iTF_00499247; iTF_00535712; iTF_00560694; iTF_00568630; iTF_00477008; iTF_00832566; iTF_00486233; iTF_00570767; iTF_00544121; iTF_00519578; iTF_00582619; iTF_00561403; iTF_00551964; iTF_00595612; iTF_00513117; iTF_00599965; iTF_00803261; iTF_00495519; iTF_00474880;
- 90% Identity
- iTF_00496245;
- 80% Identity
- -