Dsta012546.1
Basic Information
- Insect
- Drosophila stalkeri
- Gene Symbol
- grn
- Assembly
- GCA_035047405.1
- Location
- JAWNPR010000142.1:2703296-2733310[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-19 5.8e-16 57.9 4.7 1 35 403 436 403 437 0.98 2 2 7.5e-19 2e-15 56.1 6.3 1 35 463 496 463 497 0.97
Sequence Information
- Coding Sequence
- ATGCTAAACAGCTCCAGCAATGAGCTCGAGAGCAGCTCCCAGCTGAATGTCAGCTCAAACTTCAGTCAAGCATCCCGCATGCCATCCtcacatgccacgccccaagtGTGCCGGCCGCACTTTCATACACCGCTCAGTCCCTGGCTGACCAGCGAACACAAATCGTTTCCACCCGCCAGCGCCTGGGGCATGAGTCAATTTGCGTGCCCCCAGGAGCCGCAGGTGGAGCACAAACTGGGCCAGGTGGGCCAGAGCCATCAGACCACATCGGCCGGCCAGCATTCGTTTCCATTCCCACCAACACCGCCAAAGGACTCCACGCCCGATTCCGTACAAACCGGCCAGTCCGAGTATCAGGCCGTGATGAACGCGTTCATGCACCAGCAGGCCACGGGCTCTACCTCACTGACGGACGCCAGCTGTGCGCTGGACATCAAGCCCTCCATACAGAACGGCGGACCGAGTGCAGCGCACGCGGGCAGCGCCGGACCGGCCCAATCCTCGGCGCCCAAACAGCGTGAAGGTACGAACAATACAAATAGCTCaaatagtagcagcagcagcggcggcggcggcggcgccgGCAGTCAAACgacgtcgcagcagcagcagcaacaacagcagcagcaacagcaacagcagcagcagcagcagcagcaacagaatagcaacagcaatgcctCCTCAACCGCCTCCGCCTCTGTGTCCGCATCGACGTCGAACGGCCTGTTCGATGGCACCGCCCAGGCGCATTATGCGGCcaacaatgccaacagctATGACAGCAGCTATGCCTCGTATCATCATGCGGCGGCGCAGCATCAGGCAGCAGTTGCCGCCGCCAACATGTTCCAAAGTTCCTCCGTGGCAGCGGCCGCCGTGCGGCATAGCATGGCGGCggcgcatcatcatcatcatcatagtCATAGCCATCACAGTCAGGCGGGTGCCGGAGCGGGCCTACATGGCAGTGGTGCTGgcagtggtggtggtgttggtggtggtgctggtggcgTTCTTGGCAGTGGTGCACTTGGCATGGGCAGCGGCATGGGCAGTGGCATGAGCAGTGGCGGTCACAGCAGCTCcagcggtggtggtggcggtggcgttGGTGGTGCTGGCGGTGGTGCTGGCAGCCTTAACATCGGACTCGATGTGAAGCCCGTGCGCACAAAGCCAAGGACAAGTGCGGagggCCGCGAGTGCGTAAACTGTGGTGCCACCTCCACGCCGCTGTGGCGACGCGACGGCACCGGACATTATCTGTGCAATGCCTGTGGCCTCTACTACAAAATGAACGGACAGAATCGGCCGCTGATCAAGCCAAAGCGAAGACTGACGTTGCAGTCGCTGCAGAGCGCAGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAAGACCACAACCACAACCCTTTGGCGACGCAATGCCAGCGGTGAGCCGGTCTGCAATGCCTGCGGATTGTACTACAAGCTGCATAATGTCAATCGTCCACTTACCATGAAAAAGGAGGGCATACAAACGCGTAATCGCAAGCTCAGCTCCAagtcgaagaagaagaagggctTGGGCGGCGGCTGTCTACCGATGGGCGGACATCTGGGCATGGGCGATTTCAAGCCATTGGATCCATCCAAGGGCTTTGGCGGCGGTTTCTCAGCCTCCATGGCACAACATGGACACCTTTCCAGCGGACTGCATCCGGCACATGCGCACATGCACGGCAGCTGGTATACCGGCGGCATGGGCGCATTGGGCGCCTCCGGTGGACTCCAGGGTGGCTTCTCCACGGCCGGTTCGTTGGGCGGCGGCGTTGTACCACACTCGCAGCCCTACCACTTGGGACTCAGCTCAATGGGCACTTGGCGCACTGACTATACGTGA
- Protein Sequence
- MLNSSSNELESSSQLNVSSNFSQASRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFPPASAWGMSQFACPQEPQVEHKLGQVGQSHQTTSAGQHSFPFPPTPPKDSTPDSVQTGQSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGGPSAAHAGSAGPAQSSAPKQREGTNNTNSSNSSSSSGGGGGAGSQTTSQQQQQQQQQQQQQQQQQQQQQNSNSNASSTASASVSASTSNGLFDGTAQAHYAANNANSYDSSYASYHHAAAQHQAAVAAANMFQSSSVAAAAVRHSMAAAHHHHHHSHSHHSQAGAGAGLHGSGAGSGGGVGGGAGGVLGSGALGMGSGMGSGMSSGGHSSSSGGGGGGVGGAGGGAGSLNIGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00565029;
- 90% Identity
- iTF_00544876;
- 80% Identity
- -