Dmer005700.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- grn
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000055.1:31659012-31683349[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-19 6e-16 57.9 4.7 1 35 387 420 387 421 0.98 2 2 8.3e-19 2.1e-15 56.2 6.3 1 35 447 480 447 481 0.97
Sequence Information
- Coding Sequence
- ATGGATATTATCGCAGCACAGCCATCgatcggcagcagcagcaacagcagcagcagcagcggcggcaacagcagcctcGAATACCCTTGGGAAACATCCCGCATGCCCTCCtcacatgccacgccccaagtgTGCCGGCCGCACTTTCATACGCCGCTCAGTCCCTGGCTGACCAGCGAGCACAAATCGTTTGCACCCGCCAGCGCCTGGGGCATGAGTCAATTTGCGTGCCCCCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAGGTGGGCCAGAGCCATCAGACAACGTCGGCCGGCCAGCACTCGTTTCCATTCCCACCAACACCGCCAAAGGACTCCACGCCCGACTCCGTGCAGACCGGCCAGTCCGAGTACCAGGCCGTGATGAACGCGTTCATGCACCAGCAGGCCACCGGCTCTACCTCACTGACGGACGCCAGCTGCGCGCTGGATATCAAGCCCTCCATACAGAACGGCGGCCCGACAGCGGCGCACGCTGGCAGCGGCGGCCCGGCCCAATCCTCGGCGCCCAAGCAGCGTGAAGGTACGAACAATACGAATAGCtcaaatagcagcagcagcagcagtcaggcgacgtcgcagcagcagcagcaacagcagcagcagcagcagcaacagcagcagcagcagcaaagcagcaacagcaatgcctCCTCCTCCGCCTCAGCCTCTGTGTCGAACGGTTTGTTCGACGGCACCGCCCAGGCGCACTATGCGGCCAACAATGCCAACAGCTACGACAGCAGCTATGCCTCGTACCACCATGCGGCGGCGCAGCACCAGGCGGCAGTTGCCGCCGCCAACATGTTCCAAAGTTCCTCCGTAGCAGCGGCTGCAGTGCGTCATAGCATGGCAGCggcgcatcatcatcatcatcacagTCACAGCCATCATAGTCAGGCGGGCTCTGGAGCGGGCCTGCACGgcagtggtggtggtggtggcggtggtggtggtggtgttggcATGGGCAGCGGCGGCATGGGCAGTGCCCTGAGCAGCGGCGGTCACAGCAGCTCCAGTGGTGGAGGCGGCGGTGGcgttggtggtgctggtggtgctggcaACCTGAGCATCGGACTCGATGTGAAGCCCGTGCGCACCAAGCCCAGGACGAGTGCCGAGGGCCGCGAGTGCGTAAACTGTGGTGCCACCTCCACGCCGCTGTGGCGACGCGACGGCACCGGACATTATCTGTGCAATGCCTGTGGCCTCTACTACAAAATGAACGGACAGAATCGGCCGCTGATCAAGCCAAAGCGAAGACTGACGCTGCAGTCGCTGCAGAGCGCGGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAAGACCACAACCACAACCCTTTGGCGGCGCAACGCCAGCGGCGAGCCGGTCTGCAATGCCTGCGGCTTGTACTACAAGCTGCACAATGTCAATCGTCCACTTACCATGAAAAAGGAGGGCATACAAACGCGTAATCGCAAGCTCAGCTCCAagtcgaagaagaagaagggctTGGGCGGCGGCTGCCTGCCGATGGGCGGACATCTGGGCATGGGCGACTTCAAGCCGCTGGATCCATCGAAGGGCTTTGGCGGCGGCTTCTCAGCCTCCATGGCGCAACATGGACACCTTTCCAGCGGACTGCATCCGGCACATGCGCACATGCACGGCAGCTGGTATACCGGCGGCATGGGCGCATTGGGCGCCTCCGGCGGATTGCAGGGTGGCTTCTCGACTGCCGGTTCGCTGGGCGGCGGCGTCGTGCCCCACTCGCAGCCCTACCACTTGGGACTCAGCTCAATGGGCACTTGGCGCACTGACTACACGTGA
- Protein Sequence
- MDIIAAQPSIGSSSNSSSSSGGNSSLEYPWETSRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWGMSQFACPQEPQVEHKLGQVGQSHQTTSAGQHSFPFPPTPPKDSTPDSVQTGQSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGGPTAAHAGSGGPAQSSAPKQREGTNNTNSSNSSSSSSQATSQQQQQQQQQQQQQQQQQQSSNSNASSSASASVSNGLFDGTAQAHYAANNANSYDSSYASYHHAAAQHQAAVAAANMFQSSSVAAAAVRHSMAAAHHHHHHSHSHHSQAGSGAGLHGSGGGGGGGGGGVGMGSGGMGSALSSGGHSSSSGGGGGGVGGAGGAGNLSIGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00565029;
- 90% Identity
- iTF_00473442; iTF_00516653; iTF_00551964; iTF_00559876; iTF_00573704; iTF_00554734; iTF_00540752; iTF_00479835; iTF_00477008; iTF_00568630; iTF_00547024; iTF_00572976; iTF_00510195; iTF_00502906; iTF_00520287; iTF_00513117; iTF_00599965; iTF_00494046; iTF_00532766; iTF_00545631;
- 80% Identity
- -