Dsub008851.1
Basic Information
- Insect
- Drosophila suboccidentalis
- Gene Symbol
- grn
- Assembly
- GCA_037043435.1
- Location
- JBAMBK010001322.1:224499-246255[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-19 6.9e-16 57.8 4.7 1 35 430 463 430 464 0.98 2 2 1.1e-18 2.4e-15 56.1 6.3 1 35 490 523 490 524 0.97
Sequence Information
- Coding Sequence
- AtgatacaaattaaacaatttatgacaatgcagcagcagcggcagcagcaacagttgctgttgctgttgctgttgccttggCCATATGCAAAGAGTCTGCGCGAAGGCCGCGAGCGTCGTTTTGTGGCCAATGcatcCCGCATGCCCTCCTCACATGCCACGCCCCAAGTGTGCCGGCCGCACTTTCATACGCCGCTGAGTCCTTGGCTGACCAGCGAGCACAAATCGTTTGCACCCGCCAGTGCCTGGGGCATGGGCCAATTCGCCTGCCCCCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAAGTGGGCCAAAGCCATCAGACGACGGCGTCCGCCGGCCAGCACTCGTTCCCATTCCCACCGACACCGCCAAAGGACTCCACGCCCGACTCAGTACAAACCGGTCCATCCGAGTACCAGGCCGTGATGAACGCGTTTATGCACCAACAGGCCACGGGCTCTACCTCACTGACGGACGCCAGTTGTGCGCTGGACATCAAGCCCTCCATACAAAATGGCGGCGCATCCTCGGCGCATGTCGGCAGCTCTGGACCAGCGCAATCGTCGGCGCCCAAGCAGCGTGAAGGTAgtactaacaacaacaacaacaacaatacaaatagctcaaatagcagcagcagcagcggcaacaaccaaacgccgcagcagcagcagcaacagcaacaacagcagcagcagcaacagccgaataacagcagcaacaacaacactaataataacaacagcaatgccTCCGCCTCCCCATCCGCCTCCACATCCAACGGCCTGTTCGATGGCACCGCCCAGGCGCATTACGCGGCCAACAACGCGGCCAACAGCTACGACAGCAGCTATGCCTCGTATCATCATGCGGCGGCGCAGCATCAGGCGGCTGTTGCCGCCGCCAACATGTTCCAAAGTTCCTCCGTGGCAGCGGCCGCCGTGCGGCACAGCATGGgcgcggcagcggcagcagcggcgcatcatcatcatcatcacagtCACAGCCACAGTCACGGGCATCATCACGGTGCCTCGGTTGGTGCCGGTTCCGGCTCTGGTTCCGGTTCGGGCCTGCACGGCGGTGGTGTcagtggtggtgctggtggtgttgGCGGTGGTGTCATGAGCGGCATGGGCAGCGGCATGAGCAGCGGCGCCCACAGCAGCTCAAGTGGCGCTGgaggtggcggcggcggcggtggcggtggtggcctTGGAGTTGGCGGTCTCGATGTCAAGCCCGTGCGCACAAAGCCCAGGACCAGTGCTGagGGTCGAGAGTGCGTAAATTGTGGTGCAACATCAACACCGCTGTGGCGACGCGACGGAACTGGACATTATTTGTGCAACGCCTGTGGCCTCTACTACAAAATGAATGGACAGAATCGACCACTGATCAAGCCAAAGCGAAGACTGacGCTCCAGTCGCTGCAGAGCGCGGCCAAAAGGGCGGGCACATCCTGCGCCAACTGCAagaccacaaccacaaccctTTGGCGGCGCAACGCCAGCGGCGAGCCCGTGTGCAATGCCTGCGGATTATACTACAAGCTGCATAATGTCAATCGTCCACTTACCATGAAAAAGGAGGGCATTCAAACGCGTAACCGCAAGCTCAGCTCCAAgtcgaagaagaagaagggcTTGGGCGGCGGCTGTCTGCcaattggcggccatttgggCATGGGCGACTTCAAGCCGCTGGATCCGTCCAAGGGCTTTGGCGGCGGCTTCTCGGCATCCATGGCGCAACATGGACACCTTTCCAGTGGTCTGCATCCGGCACATGCGCATATGCATGGCAGCTGGTATACTGGCGGCATGGGCGCCTTGGGCGCCTCCGGTGGACTGCAGGGCGGCTTCTCCACGGCCGGCTCTCTGGGCGGTGGTGTAGTGCCCCACTCGCAGCCCTATCACTTGGGCCTCAGCTCAATGGGCACTTGGCGTACGGACTACACGTGA
- Protein Sequence
- MIQIKQFMTMQQQRQQQQLLLLLLLPWPYAKSLREGRERRFVANASRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWGMGQFACPQEPQVEHKLGQVGQSHQTTASAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGGASSAHVGSSGPAQSSAPKQREGSTNNNNNNNTNSSNSSSSSGNNQTPQQQQQQQQQQQQQQPNNSSNNNTNNNNSNASASPSASTSNGLFDGTAQAHYAANNAANSYDSSYASYHHAAAQHQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHHHHHHSHSHSHGHHHGASVGAGSGSGSGSGLHGGGVSGGAGGVGGGVMSGMGSGMSSGAHSSSSGAGGGGGGGGGGGLGVGGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00565029;
- 90% Identity
- iTF_00537892;
- 80% Identity
- -