Cpro014045.1
Basic Information
- Insect
- Chymomyza procnemis
- Gene Symbol
- grn
- Assembly
- GCA_035046065.1
- Location
- JAWNOJ010000026.1:30692179-30734170[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-19 5.1e-16 58.0 4.7 1 35 363 396 363 397 0.98 2 2 1.2e-18 1.8e-15 56.2 6.3 1 35 423 456 423 457 0.97
Sequence Information
- Coding Sequence
- ATGCCATCGTCACATGCCACGCCGCAAGTGTGTCGGCCGCACTTTCATACGCCGCTTAGTCCCTGGTTAACCAGTGAGCATAAATCTTTTGCACCCGCTAGCGCTTGGAGCAGTCAGTTTGGTCAGTTTGCTTGCCCGCAGGAGCCGCAGGTGGAGCATAAGTTAGGCCAAGTGGGGCAAAGCCATCAGACCACAGCAGCCGGCCAGCATTCGTTTCCATTCCCACCGACACCGCCAAAGGATTCGACACCCGATTCAGTACAAACCGGTCCATCGGATTATCAGGCCGTTATGAACGCCTTCATGCATCAGCAGGCGACGGGCACTACCTCATTAACGGACGCCAGCTGTGCTTTGGACATTAAGCCCTCCCTGCAAAATGGCGTCGGCGTTGGCGCATCCGGCAGCAGTGCGGCAGCGCATGCGGCGCACGCAGCCAGCCAGGCGCAGACATCGGCGCCCAAACAGCGCGAAGGTAGTACAACCAGTAACAATAGCTctaataccaacaacaacaacaacagcagtggGAGCAGCGCCAGCCAAGctgcgcaacaacaacagaataacaacaacaacaacagcaatgccTCAGCCTCCTCCGCCTCCACATCGAACGGTCTCTTTGATGGCACAGCGCAGGCGCACTATGCCAACAATGCAAATCTGGCCGCTGTCAGCCAAGCGGGCAATAGCTatgacagcagcagctatGCCAGCTACCATCATGCGGCTGCACATCATCAGGCTGCTGTGGCAGCCGCGAATATGTTCCAAAGTTCCTCCGTCGCAGCAGCGGCTGTGCGGCATAGCATGGGTGCAGCCGCAGCGGCGgcgcatcatcatcatagtcatcatcatcatggtGTGGGTGCGTCTGCGTCTAGTGGTGGTGCTGGCAGCGCTGCACATTTGCATGGCAGCGGCGGTCTGGGTAGCGCTGGCAGCGGCATGGGTGGCATGTCCAGTCAAGGACACGGTGGCAGCAGCGGTGGCTTGAACAGTGGCAACGGCAGTGGTGTTGGCAGCATGGTTGACGTCAAGCCTGTGCGCACGAAACCACGGACCAGTGCTGaGGGACGCGAATGCGTGAATTGTGGTGCCACATCGACGCCATTATGGCGACGCGATGGCACTGGACACTATCTGTGCAATGCCTGTGGTTTATACTACAAAATGAATGGCCAAAATCGACCGTTGATCAAGCCAAAGCGAAGACTGACGCTGCAGTCGTTACAGAGCGCCGCGAAACGTGCGGGCACATCATGCGCCAACTGCAAAACCACAACCACAACCCTTTGGCGGCGTAATGCCAGCGGCGAACCCGTCTGCAATGCCTGCGGACTTTACTATAAGCTGCACAATGTCAATCGTCCACTTACCATGAAAAAGGAAGGCATACAAACGCGTAATCGCAAGCTTAGCTCCaaatcgaaaaagaaaaagggtCTGGGCGGCGGCTGTATGCCGCTTGGCGGTCATCTGGGCATGGGTGACTTCAAGCCACTCGATCCATCCAAAGGTTTCGGAGGCGGTTTCTCCGCATCAATGGCACAACATGGACACCTTTCCAGTGGACTGCATCCGGCACATGCGCACATGCATGGCAGCTGGTATACCGGCGGCATGAGCGCACTGGGCGCTTCAAGCGGTCTGCAAGGTGGTTTCTCAACGGCCGGTTCACTTGGGGGCGGCGTTGTGCCACACTCGCAGCCCTATCACTTGGGTCTTGGCTCCATGGTGAGTAGTACTTGTGCAAATTATGCGTAG
- Protein Sequence
- MPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWSSQFGQFACPQEPQVEHKLGQVGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSDYQAVMNAFMHQQATGTTSLTDASCALDIKPSLQNGVGVGASGSSAAAHAAHAASQAQTSAPKQREGSTTSNNSSNTNNNNNSSGSSASQAAQQQQNNNNNNSNASASSASTSNGLFDGTAQAHYANNANLAAVSQAGNSYDSSSYASYHHAAAHHQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAHHHHSHHHHGVGASASSGGAGSAAHLHGSGGLGSAGSGMGGMSSQGHGGSSGGLNSGNGSGVGSMVDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCMPLGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMSALGASSGLQGGFSTAGSLGGGVVPHSQPYHLGLGSMVSSTCANYA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00565029;
- 90% Identity
- iTF_00338798;
- 80% Identity
- -