Dcol013235.1
Basic Information
- Insect
- Drosophila colorata
- Gene Symbol
- grn
- Assembly
- GCA_035041545.1
- Location
- JAWNLD010000662.1:1299070-1333945[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-19 6e-16 57.7 4.7 1 35 467 500 467 501 0.98 2 2 1.1e-18 2.1e-15 56.0 6.3 1 35 527 560 527 561 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACCGCGGAGGCTGCCGCTCGCAGCTGGTACGACAGTCCGCGCTtaggcggcggcggtggcggcggcggctcacCACAAACCAATGGCCTGGGCAGCGCCGGCAGTAGCCTGGCCCACAGCCACCACAGCCTGTCCAGCGGCGCCTCATCGGCGGGCAGCAGTGTCGGTGCCGCCCTTGGCGGCGGTGctggcggcgccggcgccggcctCGGACTGGATACCAGCGATATGAGCGCCTTCTATGCGCTGGAAAGCAATGGACACCATCGCCGCTACTATCCCAGCTATCATCAGCACAcatcCCGCATGCCCTCCTCacatgccacgccccaagtGTGCCGGCCGCACTTTCATACGCCGCTCAGTCCCTGGCTGACAAGCGAGCACAAATCGTTTGCACCCGCCAGCGCCTGGGGCATGGGCCAGTTCGCCTGCCCCCAGGAGCCCCAGGTGGAGCACAAGCTGGGCCAGGTTGGCCAGAGCCATCAGACGACAGCGGCCGGCCAGCACTCGTTTCCATTCCCACCGACACCGCCAAAGGACTCCACGCCCGACTCAGTACAAACCGGCCCATCCGAGTACCAGGCCGTGATGAACGCCTTCATGCATCAGCAGGCCACGGGCTCTACCTCACTGACGGACGCCAGCTGTGCGCTGGACATCAAGCCCTCCATCCAGAATGGCGGCGCATCGGCGTCGCATGCCGGCAGCGCTGGACCGGCGCAGTCGTCGGCGCCCAAGCAGCGCGAAGGTAgtactaacaacaacaataccaatagctcaaatagcagcagcagcagcggtgcCGCCAGCGGCAACCaagcgccgcagcagcaacagcagcagcagcagcaacaacagcagcagcagcaacagcagcaaaataatgccaacaacagcaacgcctCCGCATCCGCCTCCGCCGGCACGTCGAACGGGCTGTTCGATGGCACCGCCCAAGCACATTACGCGGCCAACAATGCGAACAGCTACGACAGCAGCTATGCCTCGTACCATCATGCGGCGGCGCAGCATCAGGCGGCCGTTGCCGCGGCCAACATGTTCCAAAGTTCCTCCGTGGCAGCGGCCGCTGTGCGGCATAGCATGGGtgccgcggcggcggcggcggcgcacCATCATCACCATCACAGTCATAGTCATCATCATGGTGCGTCCGTCTCCGCTGGCTCCGGCACGGGCGCTGGCCTgcatggcggcggcggcggtggcatgAGCGGCATGGGCAGCGCCATGAGCAGCGGCGGCCACAGCAGCTCCAGCGGTggagctggcggcggcggcggcggcggcggtggcagcggcCTCGGACTCGATGTGAAGCCCGTGCGCACAAAGCCCAGGACCAGTGCTGAGGGTCGCGAGTGCGTTAATTGTGGTGCCACCTCAACACCGCTGTGGCGACGCGATGGAACTGGACATTATCTGTGCAATGCCTGTGGCCTCTACTACAAAATGAACGGACAGAACCGGCCGCTGATCAAGCCAAAGCGAAGACTGACGCTACAGTCGCTGCAGAGCGCGGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAAGACCACAACCACAACCCTTTGGCGGCGCAACGCCAGCGGCGAGCCCGTGTGCAACGCCTGCGGATTGTACTACAAGCTGCACAATGTCAATCGTCCACTTACCATGAAAAAGGAGGGCATTCAGACGCGTAACCGCAAGCTCAGCTCCAAgtcgaaaaagaaaaagggcTTGGGCGGCGGCTGTCTGCCAATGGGCGGCCATTTGGGCATGGGCGATTTCAAGCCGCTTGATCCGTCCAAGGGCTTTGGCGGCGGCTTCTCGGCCTCAATGGCGCAACATGGACACCTTTCCAGCGGGCTGCATCCGGCACATGCGCATATGCATGGCAGCTGGTATACCGGCGGCATGGGCGCATTGGGCGCCTCCGGTGGACTGCAGGGTGGCTTCTCCACGGCCGGTTCGCTCGGCGGCGGCGTTGTGCCCCACTCTCAGCCTTATCACTTGGGCCTCAGCTCAATGGGCACTTGGCGCACTGACTATACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGGGGGGSPQTNGLGSAGSSLAHSHHSLSSGASSAGSSVGAALGGGAGGAGAGLGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWGMGQFACPQEPQVEHKLGQVGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGGASASHAGSAGPAQSSAPKQREGSTNNNNTNSSNSSSSSGAASGNQAPQQQQQQQQQQQQQQQQQQNNANNSNASASASAGTSNGLFDGTAQAHYAANNANSYDSSYASYHHAAAQHQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHHHHHHSHSHHHGASVSAGSGTGAGLHGGGGGGMSGMGSAMSSGGHSSSSGGAGGGGGGGGGSGLGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00569367;
- 90% Identity
- iTF_00502178; iTF_00565029; iTF_00528450; iTF_00482642; iTF_00518817; iTF_00499957; iTF_00596313; iTF_00491172; iTF_00593508; iTF_00620247; iTF_00607475; iTF_00805627; iTF_00498525; iTF_00542813; iTF_01326820; iTF_00617285; iTF_00563554; iTF_00531344; iTF_00804038; iTF_00522599; iTF_00549209; iTF_00559147; iTF_00598539; iTF_00511660; iTF_00567916; iTF_01320846; iTF_01570606; iTF_00506515; iTF_00500693; iTF_00499247; iTF_00560694; iTF_00517368; iTF_00583336; iTF_00486233; iTF_00570767; iTF_00544121; iTF_00561403; iTF_00610299; iTF_00497800; iTF_00513839; iTF_00576722; iTF_00577427; iTF_00616566; iTF_00538620; iTF_01326051; iTF_01328260; iTF_00526967; iTF_01322298; iTF_00574461; iTF_00521809; iTF_00567193; iTF_00497034; iTF_00597806; iTF_00803261; iTF_00495519; iTF_00535712; iTF_00552692; iTF_01321568; iTF_00508754; iTF_01327538;
- 80% Identity
- -