Dneo004509.1
Basic Information
- Insect
- Drosophila neotestacea
- Gene Symbol
- grn
- Assembly
- GCA_035044365.1
- Location
- JAWNMD010000117.1:1685283-1708037[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-19 6.2e-16 57.9 4.7 1 35 398 431 398 432 0.98 2 2 9.5e-19 2.2e-15 56.1 6.3 1 35 458 491 458 492 0.97
Sequence Information
- Coding Sequence
- atgcagcagcggcagcaccAACAGTTGCTGCCTTGGCCATATGCAAAGAGTCTGCGCGAAGGCCGCGAGCGTCGTTTTGTGGCCAATGCATCCCGCATGCCCTCCTCACATGCCACGCCCCAAGTGTGCCGGCCGCACTTTCATACGCCGCTCAGTCCATGGCTGACCAGTGAACACAAATCGTTTGCACCCGCCAGTGCCTGGGGCATGGGTCAATTTGCTTGCCCCCAGGAGCCGCAGGTGGAGCATAAACTGGGCCAAGTGGGCCAAAGCCATCAGACGACGGCGTCCGGCCAGCATTCGTTTCCATTCCCACCAACACCGCCAAAGGACTCCACGCCCGACTCAGTACAAACCGGTCCATCCGAGTATCAGGCCGTGATGAACGCGTTTATGCATCAACAGGCAACGGGCTCTACCTCACTGACGGACGCCAGCTGTGCGTTGGACATTAAGCCATCTATACAGAATGGAGGGGCATCCTCGGCGCATGTTGGCAGCTCTGGACCAGCGCAATCATCTGCTCCCAAGCAGCGTGAAGGTAgtactaacaacaacaacaacaacaatacaaatagctcaaatagcagcagcagcagcggcaatgGTGCCAATGGCAACCAAGcatcgcagcagcagcagcaacagcagcaacaacaacaacagcagcagcaacagcaacagcagaatagtaacaacagcaatgcctCCTCATCCGCCTCCGCCTCCACATCCAATGGCCTCTTCGATGGCACAGCTCAGGCACATTATGCGGCCAACAATGCCAACAGCTATGACAGCAGCTATGCCTCGTATCATCATGCGGCAGCGCAACATCAGGCggctgttgccgctgccaaTATGTTCCAAAGTTCCTCAGTGGCAGCAGCCGCTGTGCGGCATAGTATGGgtgcggcagcggcagcagcggcgcatcatcatcatcatcatagtcACAGTCATCATCATGGTGCGTCCGCTTCGGTCGGATCCGGATCTGGCTCGGGATCTGGCCTTAGCCAcggtggcggtggtgctggtggcATGAGTGCAATGGGCAGTGGCATGAGCACAGGTGCCCATAGTGGCTCAAGTGGTGCTggaggtggcggtggtggtggtgttggcgTTGGTGGTCTGGATGTTAAACCTGTGCGCACAAAACCCAGGACAAGTGCTGAGGGTCGAGAGTGCGTAAATTGTGGGGCAACCTCAACACCACTGTGGCGACGGGATGGAACTGGACATTATTTGTGCAACGCCTGTGGCCTGTACTACAAAATGAATGGACAGAATCGACCACTGATCAAGCCAAAGCGAAGACTGACGCTACAGTCGCTGCAGAGCGCGGCAAAGCGGGCGGGAACATCCTGCGCCAATTGCaagaccacaaccacaaccctTTGGCGGCGCAATGCCAGCGGTGAGCCCGTGTGCAATGCCTGCGGATTATACTACAAGCTGCATAATGTCAATCGTCCACTTACCATGAAAAAGGAGGGCATACAAACGCGTAACCGCAAGCTCAGCTCCAAGTCCAAGAAGAAAAAGGGCCTAGGAGGCGGTTGTCTGCCAATTGGTGGCCATTTGGGCATGGGAGACTTTAAGCCACTCGATCCGTCCAAGGGATTTGGCGGCGGCTTCTCGGCATCTATGGCTCAACATGGACACCTTTCCAGTGGTCTGCATCCGGCACATGCGCATATGCATGGCAGTTGGTATACTGGTGGCATGGGGGCATTGGGTGCCTCTGGTGGTCTACAGGGTGGCTTCTCCACTGCCGGCTCTCTTGGCGGTGGTGTTGTGCCCCACTCTCAGCCGTATCACTTGGGCCTCAGCTCAATGGGCACTTGGCGTACGGACTACACGTGA
- Protein Sequence
- MQQRQHQQLLPWPYAKSLREGRERRFVANASRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWGMGQFACPQEPQVEHKLGQVGQSHQTTASGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGGASSAHVGSSGPAQSSAPKQREGSTNNNNNNNTNSSNSSSSSGNGANGNQASQQQQQQQQQQQQQQQQQQQNSNNSNASSSASASTSNGLFDGTAQAHYAANNANSYDSSYASYHHAAAQHQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHHHHHHSHSHHHGASASVGSGSGSGSGLSHGGGGAGGMSAMGSGMSTGAHSGSSGAGGGGGGGVGVGGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00565029;
- 90% Identity
- iTF_00537892;
- 80% Identity
- -